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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 731 fasta sequence
[CCGGAACAAAACGCATTCAAGAAAAAGCGCTCCAACCGGCAGGTCCTGTGTCACTCTCTCTCTTCACGCCCGTTAGGCTCAAACATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGCTGGAGTTGGCCGGCAACGCCTCGAAGGATCTCAAAGTGAAGCGAATCACGCCCAGGCATCTGCAGCTGGCCATTCGCGGTGACGAGGAGCTGGACAGCTTGATCAAGGCCACCATTGCCGGCGGTGGCGTCATTCCCCACATCCACAAATCGCTCATCGGCAAGAAGGGCGGCCCCGAGTAATAAGCAGTCCCGCGTTTTTTTTTATGGATAGCGGGGACAGGG-A-GAGGGAGGCGCCGAAACGATAGCAGTCCCATGCGCGAAAGGCATGGG-AGA---AGAGGCAGAGAGAGAGAGGGAAGAGTAGGAGCATTGGGGATAATCCATTTGTATGACCACACGAAAAGTTTATTTTTAATCGTGAGCGTGAGCGAGAGAGCGCATGCTTTTTTCCTATATAGAACCTACGGTGTTATAGAGACAGAGGAGATAG]
[+] EMBL BM613866 [CCGGAACAAAACGCATTCAAGAAAAAGCGCTCCAACCGGCAGGTCCTGTGTCACTCTCTCTCTTCACGCCCGTTAGGCTCAAACATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGCTGGAGTTGGCCGGCAACGCCTCGAAGGATCTCAAAGTGAAGCGAATCACGCCCAGGCATCTGCAGCTGGCCATTCGCGGTGACGAGGAGCTGGACAGCTTGATCAAGGCCACCATTGCCGGCGGTGGCGTCATTCCCCACATCCACAAATCGCTCATCGGCAAGAAGGGCGGCCCCGAGTAATAAGCAGTCCCGCGTTTTTTTTTATGGATAGCGGGGACAGGG ACGAGGGAGGCGCCGAAACGATAGCAGTCCCATGCGCGAAAGGCATGGG AGA AGAGGCAGAGAGAGAGAGGGAAGAGTAGGAGCATTGGGGATAATCCATTTGTATGACCACACGAAAAGTTTATTTTTAATCGTGAGCGTG ]
[+] EMBL BM590147 [ ccgGCTCCAACCGGCAGGTCCTGTGTCACTCTCTCTCTTCACGCCCGTTAGGCTCAAACATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGCTGGAGTTGGCCGGCAACGCCTCGAAGGATCTCAAAGTGAAGCGAATCACGCCCAGGCATCTGCAGCTGGCCATTCGCGGTGACGAGGAGCTGGACAGCTTGATCAAGGCCACCATTGCCGGCGGTGGCGTCATTCCCCACATCCACAAATCGCTCATCGGCAAGAAGGGCGGCCCCGAGTAATAAGCAGTCCCGCGTTTTTTTTTATGGATAGCGGGGACAGGGAA GAGGGAGGCGCCGAAACGATAGCAGTCCCATGCGCGAAAGGCATGGG AGA AGAGGCAGAGAGAGAGAGGGAAGAGTAGGAGCATTGGGGATAATCCATTTGTATGACCACACGAAAAGTTTATTTTTAATC ]
[+] EMBL CNS09QPJ [ TCACG CCGTTA GCTCAATCATTATCCAACAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGCTGGAGTTGGCCGGCAACGCCTCGAAGGATCTCAAAGTGAAGCGAATCACGCCCAGGCATCTGCAGCTGGCCATTCGCGGTGACGAGGAGCTGGACAGCTTGATCAAGGCCACCATTGCCGGCGGTGGCGTCATTCCCCACATCCACAAATCGCTCATCGGCAAGAAGGGCGGCCCCGAGTAATAAGCAGTCCCGCGTTTTTTTTTATGGATAGCGGGGACAGGG A GAGGGAGGCGCCGAAACGATAGCAGTCCCATGCGCGAAAGGCATGGGAAGAGGCAGAGAGAGAGAGAGAGAGGGAAGAGTAGGAGCATTGGGGATAATCCAGGGGTATGAC ]
[+] EMBL CNS08EEU [ TCACG CCGTTA GCTCAATCATCATCCAATAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGCTGGAGTTGGCCGGCAACGCCTCGAAGGATCTCAAAGTGAAACGAATCACGCCCAGGCATCTGCAGCTGGCCATTCGCGGTGACGAGGAGCTGGACAGCTTG ]
[+] EMBL BM587988 [ TGACGAGGAGCTGGACAGCTTGATCAAGGCCACCATTGCCGGCGGTGGCGTCATTCCCCACATCCACAAATCGCTCATCGGCAAGAAGGGCGGCCCCGAGTAATAAGCAGTCCCGCGTTTTTTTTTATGGATAGCGGGGACAGGG A GAGGGAGGCGCCGAAACGATAGCAGTCCCATGCGCGAAAGGCATGGG AGA AGAGGCAGAGAGAGAGAGGGAAGAGTAGGAGCATTGGGGATAATCCATTTGTATGACCACACGAAAAGTTTATTTTTAATCGTGAGCGTGAGCGAGAGAGCGCATGCTTTTTTC ]
[+] EMBL BM619107 [ ccgGGGAAGAGTAGGAGCATTGGGGATAATCCATTTGTATGACCACACGAAAAGTTTATTTTTAATCGTGAGCGTGAGCGAGAGAGCGCATGCTTTTTCTCTATATAGAACCTACGGTGTTATAGAGACAGAGGAGATAG]
consensusID : consensus_7451#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence
[CCGGCGCTCCAACCGGCAGGTCCTGTGTCACTCTCTCTCTTCACGCCCGTTAGGCTCAATCATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGAGTTGAACATTTGCAACACACACACACATACACAGACAGAAACTAAAACAGCAGCAGCAAGAAGAGCGGTGCATAATGGCTAGAGAGAATCTCGATTAAAAGCACTTTATTACGTGCCAGTTAGTTTTTGAAAATGCACAGGGAAACTGCAACAGAAGGAGGGAGTTGTTGGAGTTCAATTTCGAGGGTGCGCATCATCGCTTCTGCAGTAGTGTCGAGGCATCGAGAGGGAAAAGTTTTTCGCGCCAAAACGCCATCACACAAAGTTGCTGCCGCGTGTGTATGTGTGATGTTTTGGATTTGTTCGAAGTGGGTCGATTTGCTTGTGGCTAAGTAGAGGAGAGGGGTTAACGGGGCAAAATGGGCACCCATTATTTAA]
[+] EMBL BM606364 [CCGGCGCTCCAACCGGCAGGTCCTGTGTCACTCTCTCTCTTCACGCCCGTTAGGCTCAATCATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTTGCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACGCGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGTGAGTTGAACATTTGCAACACACACACACATACACAGACAGAAACTAAAACAGCAGCAGCAAGAAGAGCGGTGCATAATGGCTAGAGAGAATCTCGATTAAAAGCACTTTATTACGTGCCAGTTAGTTTTTGAAAATGCACAGGGAAACTGCAACAGAAGGAGGGAGTTGTTGGAGTTCAATTTCGAGGGTGCGCATCATCGCTTCTGCAGTAGTGTCGAGGCATCGAGAGGGAAAAGTTTTTCGCGCCAAAACGCCATCACACAAAGTTGCTGCCGCGTGTGTATGTGTGATGTTTTGGATTTGTTCGAAGTGGGTCGATTTGCTTGTGGCTAAGTAGAGGAGAGGGGTTAACGGGGCAAAATGGGCACCCATTATTTAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7451#0 CCGGAACAAAACGCATTCAAGAAAAAGCGCTCCAACCGGCAGGTCCTGTGTCACTCTCTC 60
consensus_7451#1 -----------------------CCGGCGCTCCAACCGGCAGGTCCTGTGTCACTCTCTC 37
**********************************
consensus_7451#0 TCTTCACGCCCGTTAGGCTCAAACATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGC 120
consensus_7451#1 TCTTCACGCCCGTTAGGCTCAATCATCATCCAACAAAAGCAAAATGGCTGGCGGTAAAGC 97
********************** *************************************
consensus_7451#0 AGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTT 180
consensus_7451#1 AGGCAAGGATTCGGGCAAAGCGAAAGCCAAAGCAGTGTCGCGCTCCGCAAGGGCGGGTTT 157
************************************************************
consensus_7451#0 GCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACG 240
consensus_7451#1 GCAGTTCCCGGTCGGACGTATCCATCGTCATCTGAAAAACCGAACCACAAGCCATGGACG 217
************************************************************
consensus_7451#0 CGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGT 300
consensus_7451#1 CGTCGGTGCGACCGCCGCCGTTTACTCGGCAGCCATCCTGGAGTACCTGACGGCTGAGGT 277
************************************************************
consensus_7451#0 GCTGGAGTTGGCCGGCAACGCCTCGAAGGATCTCAAAGTGAAGCGAATCACGCCCAGGCA 360
consensus_7451#1 G----AGTTGAACATTTGCAACACACACACACATACACAGACAGAAACTA-----AAACA 328
* ***** * * * * * * * * ** ** * * **
consensus_7451#0 TCTGCAGCTGGCCATTCGCGGTGACGAGGAGCTGGACAG---CTTGATCAAGGCCACCAT 417
consensus_7451#1 GCAGCAGCAAG--AAGAGCGGTGCATAATGGCTAGAGAGAATCTCGATTAAAAGCACTTT 386
* ***** * * ****** * *** ** ** ** *** ** *** *
consensus_7451#0 TGCCGGCGGTGGCGTCATTCCCCACATCCACAAATCGCTCATCGGCAAGAAGGGCGGCCC 477
consensus_7451#1 ATTACGTGCCAGTTAGTTTTTGAAAATGCACAGGGAAACTG-CAACAGAAGGAGGGAGTT 445
* * * ** * ** **** * ** * * * *
consensus_7451#0 CGAGTAATAAGCAGTCCCGCGTTTTTTTTTATGGATAGCGGGGACAGGGAGAGGGAGGCG 537
consensus_7451#1 GTTGGAGT--TCAATTTCGAGGGTGCGCAT---CATCGCTTCTGCAGTAGTGTCGAGGCA 500
* * * ** * ** * * * ** ** *** *****
consensus_7451#0 CCGAAACGATAGCAGTCCCATGCGCGAAAGGCATGGGAGAAGAGGCAGAGAGAGAGAGGG 597
consensus_7451#1 TCGAGA-GGGAAAAGTTTTTCGCGCCAAAACGCCATCACACAAAGTTGCTGCCGCGTGTG 559
*** * * * *** **** *** * * * * * * * * *
consensus_7451#0 AAGAGTAGGAGCATTGGGGATAATCCATTTGTATGACCACACGAAAAGTTTATTTTTAAT 657
consensus_7451#1 TATGTGTGATGTTTTGGATTTGTTCGAAGTGGGTCGATTTGCTTGTGGCTAAGTAGAGGA 619
* * * **** * ** * ** * * * * * *
consensus_7451#0 CGTGAGCGTGAGCGAGAGAGCGCATGCTTTTTTCCTATATAGAACCTACGGTGTTATAGA 717
consensus_7451#1 GAGGGGTTAACGGGGCAAAATGGGCACCCATTATTTAA---------------------- 657
* * * * * * * * ** **
consensus_7451#0 GACAGAGGAGATAG 731
consensus_7451#1 --------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||