These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_747#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence [GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATCCGCTGCTAACGCCACCACCGCTCGTAGGAAACAACAATGGAGGCGCTTGGTACCCGGGATATCCGGGATATCCAATCCTTACACCGCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAACGCCAACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGTATCCGGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCATTCAGCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAGG] [+] EMBL AL934624 [GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATCCGCTGCTAACGCCACCACCGCTCGTAGGAAACAACAATGGAGGCGCTTGGTACCCGGGATATCCGGGATATCCAATCCTTACACCGCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAACGCCAACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGTATCCGGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCATTCAGCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAGG] consensusID : consensus_747#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 423 fasta sequence [GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTCGTAGGAAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAATAATCCCAAATCGCCTTTAACAACCCGGGCAACACCGGNGGGGGCAGGGCGGAATGGGTATTCCAAGTCAAGGCGAAGTA] [+] EMBL AL932651 [GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTGAAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGTGCTCGATAGCCGAAGGAAACAAGATCCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGCCAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCAACCTACCCGATACTGACACCGTCCACGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTCGTAGGAAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAATAATCCCAAATCGCCTTTAACAACCCGGGCAACACCGGNGGGGGCAGGGCGGAATGGGTATTCCAAGTCAAGGCGAAGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_747#0 GTTTTAACGTGTTGGAAGTGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTG 60 consensus_747#1 ---GAATCGCCCGAGGNTAGATTGTGTGAGACAACACTACTGGTCATGAAGTTTGTTTTG 57 * ** * ***************************************** consensus_747#0 AAGTGTTTGGCGATCTTTTTGGCAGCTATCCTGGTGCTCGATAGCCGAAGGAAACAAGAT 120 consensus_747#1 AAGTGTTTGGCGATCTTTTTGGCAGCTATCCTG-TGCTCGATAGCCGAAGGAAACAAGAT 116 ********************************* ************************** consensus_747#0 CCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGC 180 consensus_747#1 CCGATGCTATTCGTGTGATGATTGTAACAAACAAGAGCCGGAGATCGTCCAGTGCAGCGC 176 ************************************************************ consensus_747#0 CAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACCCAACCTACCCGATACTGACACC 240 consensus_747#1 CAATAATGGGCTAGATCTGAATGCGCTGAGCTACAACC-AACCTACCCGATACTGACACC 235 ************************************** ********************* consensus_747#0 GTCCACGCCGTACTGGAACGCAAACCCCTGGGAT-CCGCT-GCTAACGCCACCACCGCTC 298 consensus_747#1 GTCCACGCCGTACTGGAACGCAAACCCCTGGGATTCCGCTTGCTAACGCCAACAACGCTC 295 ********************************** ***** ********** ** ***** consensus_747#0 GTAGGAAACAACAATGGAGGCGCTTG-GTACCCGGGA-TATCCGGGATATCCAATCCTTA 356 consensus_747#1 GTAGGAAACAACAATGGAGGCGCTTGAGTACCCGGGACTATCCGGGAA---TAATCCC-A 351 ************************** ********** ********* ***** * consensus_747#0 CACCGCCACCGTTGGGCGGCGGTGGTATCAATCAGCAGTATCCCTGGGACCCACTGCTAA 416 consensus_747#1 AATCGCC----TTTAACAACCCGGGCAACA-CCGGNGGGGGC---AGGGCGGAATGGGTA 403 * **** ** * * ** * ** * * * * ** * * ** * consensus_747#0 CGCCAACACCGTCGTTGGGGACAATAATGGAAGGTGCCTGGTACCCGGGATACCCCTGGT 476 consensus_747#1 TTCCAA-GTCAAGGCGAAGTA--------------------------------------- 423 **** * * * * consensus_747#0 ATCCGGGCTACCCGGGATATCCAATCCTTAACCCGCACCGTTGGGCGGCGGCGGGTGGCA 536 consensus_747#1 ------------------------------------------------------------ consensus_747#0 TTCAGCAGTACCCGTGGGATCCACTGCTAACGCCACAACGTCGTAGGAAATATAATGGAG 596 consensus_747#1 ------------------------------------------------------------ consensus_747#0 G 597 consensus_747#1 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||