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Anopheles gambiae
cluster # 7480 cluster # 7480       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7480#0 length = 1196 sequences # 1  
consensus_7480#1 length = 1130 sequences # 4  
consensus_7480#2 length = 784 sequences # 1  
consensus_7480#3 length = 561 sequences # 1  

consensusID : consensus_7480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1196
fasta sequence
                              [GGCAGAATNCCCCGCAGTTANAAAAAGATCCGCTACTCCGCTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGNGAAACGTACCCCGGCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTTGGACGGCGAGTCATCTGCATAGGCTAGGACAGTGGATGCGCTATATGTACTTTATAAAAGAACACGGTACAGTNTGTACCTTTTGGTACTACACCACCAAAAANAACCGGAACATTAACAGGGGAATAGTGTTTGCGGTACTTAACATACAGGCGGGGGATTGCAATTCGGGGAATAAGGGGTTTTGGACTCACACCAATGGGTTACTTCTGGCCATTTCCTTCCAAAACACCCAACACACGGTACAACAGGTTGGAATTGGAAACCCTGGTACTGGCGGCAACTAAAATNGGTACCGATGGACGGCCCACACAGGGAATNANCTGGNAGCTATATGGCGACGGCGGTAGGTTGGTTGGCCTNTCTCACCACNCTTCCTTCANATACCTAAACCGCCAGTTATACCAAAACGCAATTCGATGGTATACCCCTNCCAAGGAAATAAACATATAAATATAACAAAGGCTATATCAAACGGGATNGGTAGGCNTTACTAGGAANCAACCAAAACTACCGNNTNTCCACGTTAANTTCGAACCCCGGCCACAGNCNACGGCCTTTNAAGCNGGTNGGCCGCTATCCATGGANAGCATCCCCGANTCTGNCACCTATCGACGAGGCGTTCCNTGNCANTCTGNGAACACAGNNCAACNAACANGCGCCGCGTGTACAATAGCTCANATCTGTGCCTCCCCCNTGACACATANGCTTAACGCAGGNCGACACCCGNGANACCCACCGTTTTCGCCCCNGATTATANAAACCCAAGGGGCGNCTTGGCAAGACNNACCTTTGCTCAGGGAAGTTTGTAAGNCAACTNTAGTGATTACAGGGCCTTACCCACGCAAAAACGAGATCATTATGGGCAANTTNACTTCCCGCTNAATGATGGGGTCTTGTATGTGNCTTGNAANCCGGTTTACAGGGATCGCCCGTATTAACTTCGGGGGGGAGGACCCAANGTATGGTGTTGAGACGAGATCACNCATGCACACGCACACGNACCACAACAGGCACAAGTNAAAAAATAGTNNACA]

[+] EMBL AL694819             [GGCAGAATNCCCCGCAGTTANAAAAAGATCCGCTACTCCGCTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGNGAAACGTACCCCGGCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTTGGACGGCGAGTCATCTGCATAGGCTAGGACAGTGGATGCGCTATATGTACTTTATAAAAGAACACGGTACAGTNTGTACCTTTTGGTACTACACCACCAAAAANAACCGGAACATTAACAGGGGAATAGTGTTTGCGGTACTTAACATACAGGCGGGGGATTGCAATTCGGGGAATAAGGGGTTTTGGACTCACACCAATGGGTTACTTCTGGCCATTTCCTTCCAAAACACCCAACACACGGTACAACAGGTTGGAATTGGAAACCCTGGTACTGGCGGCAACTAAAATNGGTACCGATGGACGGCCCACACAGGGAATNANCTGGNAGCTATATGGCGACGGCGGTAGGTTGGTTGGCCTNTCTCACCACNCTTCCTTCANATACCTAAACCGCCAGTTATACCAAAACGCAATTCGATGGTATACCCCTNCCAAGGAAATAAACATATAAATATAACAAAGGCTATATCAAACGGGATNGGTAGGCNTTACTAGGAANCAACCAAAACTACCGNNTNTCCACGTTAANTTCGAACCCCGGCCACAGNCNACGGCCTTTNAAGCNGGTNGGCCGCTATCCATGGANAGCATCCCCGANTCTGNCACCTATCGACGAGGCGTTCCNTGNCANTCTGNGAACACAGNNCAACNAACANGCGCCGCGTGTACAATAGCTCANATCTGTGCCTCCCCCNTGACACATANGCTTAACGCAGGNCGACACCCGNGANACCCACCGTTTTCGCCCCNGATTATANAAACCCAAGGGGCGNCTTGGCAAGACNNACCTTTGCTCAGGGAAGTTTGTAAGNCAACTNTAGTGATTACAGGGCCTTACCCACGCAAAAACGAGATCATTATGGGCAANTTNACTTCCCGCTNAATGATGGGGTCTTGTATGTGNCTTGNAANCCGGTTTACAGGGATCGCCCGTATTAACTTCGGGGGGGAGGACCCAANGTATGGTGTTGAGACGAGATCACNCATGCACACGCACACGNACCACAACAGGCACAAGTNAAAAAATAGTNNACA]


>consensus_7480#0 GGCAGAATNCCCCGCAGTTANAAAAAGATCCGCTACTCCGCTGCTGATGACGGCGCCGCT CAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGNGAAACGTACCCCG GCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTTGGACGGCGAGTCATCTGCATA GGCTAGGACAGTGGATGCGCTATATGTACTTTATAAAAGAACACGGTACAGTNTGTACCT TTTGGTACTACACCACCAAAAANAACCGGAACATTAACAGGGGAATAGTGTTTGCGGTAC TTAACATACAGGCGGGGGATTGCAATTCGGGGAATAAGGGGTTTTGGACTCACACCAATG GGTTACTTCTGGCCATTTCCTTCCAAAACACCCAACACACGGTACAACAGGTTGGAATTG GAAACCCTGGTACTGGCGGCAACTAAAATNGGTACCGATGGACGGCCCACACAGGGAATN ANCTGGNAGCTATATGGCGACGGCGGTAGGTTGGTTGGCCTNTCTCACCACNCTTCCTTC ANATACCTAAACCGCCAGTTATACCAAAACGCAATTCGATGGTATACCCCTNCCAAGGAA ATAAACATATAAATATAACAAAGGCTATATCAAACGGGATNGGTAGGCNTTACTAGGAAN CAACCAAAACTACCGNNTNTCCACGTTAANTTCGAACCCCGGCCACAGNCNACGGCCTTT NAAGCNGGTNGGCCGCTATCCATGGANAGCATCCCCGANTCTGNCACCTATCGACGAGGC GTTCCNTGNCANTCTGNGAACACAGNNCAACNAACANGCGCCGCGTGTACAATAGCTCAN ATCTGTGCCTCCCCCNTGACACATANGCTTAACGCAGGNCGACACCCGNGANACCCACCG TTTTCGCCCCNGATTATANAAACCCAAGGGGCGNCTTGGCAAGACNNACCTTTGCTCAGG GAAGTTTGTAAGNCAACTNTAGTGATTACAGGGCCTTACCCACGCAAAAACGAGATCATT ATGGGCAANTTNACTTCCCGCTNAATGATGGGGTCTTGTATGTGNCTTGNAANCCGGTTT ACAGGGATCGCCCGTATTAACTTCGGGGGGGAGGACCCAANGTATGGTGTTGAGACGAGA TCACNCATGCACACGCACACGNACCACAACAGGCACAAGTNAAAAAATAGTNNACA



consensusID : consensus_7480#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1130
fasta sequence
                              [CCGGGAATTCCGTACGTTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTTATCGAGGTGCCGCTCAAGAGAGTGTCCTCCCATCAGGTGGACGAGTCCGGGTTCATCACCTGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACGAAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGGTGCTACGGCGGAAGATTGAAAGCAGGGAAAGGTTCCAAACACAAGTGCGCTTTATGCTTTTAAAAGAACACGGTCAGTTGTCCTTTGGTACTCACACAAAAACGAACATCAAGGGAATAGAGTGTTGCGGTACTATTACATACAGAGGGATGCATCGGGTTAGGGCTGATAAAACGGTATTGCATTCTCAAAACAAACGT--AGTGATGAACCGTCGCGCAAAAATGTCGTGAGCCAAAGATTTTGATTTGTGGTGTGTGTGTGCTTTAAATCGTTTTCTTCCCTTTCAACACCTGTTCCCTCAGCATACTTTTTACAGCTTTCACGTGTGTTTGACACAATCTTTCCTTATCACCGCAGCAGCTTAGGTGCGTTTGATTCCATTTCTTTCACCCTTTTGAAAAAAGCCGAAACATGCCCGATATACGCGCGACATTCCATTACAGGGTGATATTTGCATTAGATAGTAAGCTCCCAAAAATTGCATATCCCAGTGGCTGTGGCGACGTTCGTCCTTATCGGTGA-CATTGTAAAAA---AAGCAAACAAAACAATAAAAATACATACTAATATTAGTTGCTGGTGATAAAACAAAAAAACACAGTGGGACGGGGACACACGATATTCTCTCGTGGAGAGTAGAGTAGAGCGGGCTCGTGTAATGCCACGGGTAATTAGATTAGGACAGCAGCAGCAATCGGCAACCATGTTGGGGGTAAGAAATAGGGGCTAACAACCGAACGGNTAACNACCCATCGGTTTTAACAGTCTGTGAAGGATACGAGGAACGTTCGATGGGAAGCGTAGCCCTTTGTTTGTTTGTGTGCGTAAATGT]

[+] EMBL BM609100             [CCGGGAATTCCGTACGTTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTTATCGAGGTGCCGCTCAAGAGAGTGTCCTCCCATCAGGTGGACGAGTCCGGGTTCATCACCTGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACGAAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGGTGCTACGGCGGAAGATTGAAAGCAGGGAAAGGTTCCAAACACAAGTGCGCTTTATGCTTTTAAAAGAACACGGTCAGTTGTCCTTTGGTACTCACACAAAAACGAACATCAAGGGAATAGAGTGTTGCGGTACTATTACATACAGAGGGATGCATCGGGTTAGGGCTGATAAAACGGTATTGCATTCTCAAAACAAACGT  AGTGATGAACCGTCGCGCAAAAATGTCGTGAGCCAAAGATTTTGATTTGTGGTGTGTGTGTGCTTTAAATCGTTTTCTTCCCTTTCAACACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08M5N             [                                                                                                                               TTTATCACCTGCCAGCCGGGATGCACATATCAAGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACGAAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGGTGCTACGGCCGAAGATTGAAGGCATGGAAAGGTTCCAAACACAAGTGCGCTTTGTGCTTTTAAAAGAACACGGTCAGTTGTCCTTCGGTACTCACACAAAAACGAACATCAAGGGAATAGAGTATTGCGGTAC   TACATTTAGAGGGATGCATCGGGCTAGGGCTGATAAAATGGTAATGCATTCTCAAAACAAACGTAAAGTGATGAACCGTCGCGCAAAAATGTCGTGAGCCAAAGATTTTGAGTTGT  TGTGTGTGTGCTTTAAATCGTTTTCTTCCCTTCCAACATCTGTTCCCTCAGCATACTTTTTACAGCTTTCACGTGTGTTTGACACAATCTTTCCTTATCACCGCAGCAGCTTAGGTGCGTTTGATTCCATTTCTTTCACCCTTTTGAAAAAAGCCGAAACATGCCCGATATACGCGCGACATTCCATTACAGGGTGATATTTGCATTAGATAGTAAGCTCCCAAAAATTGCATATCCCAGTGGCTGTGGCGACGTTCGTCCTTATCGGTGA CATTGTAAAAA   AAGCAAACAAAACAATAAAAATACATACTAATATTAGTTGCTGGTGATAAAA                                                                                                                                                                                                                                                    ]
[+] EMBL BX622939             [                                                                                                                                                                                                                                                                                                                                                                                                                                           CGGTACTATTACATACAGAGGGATGCATCGGGTTAGGGCTGATAAAACGGTATTGCATTCTCAAAACAAACGT  AGTGATGAACCGTCGCGCAAAAATGTCGTGAGCCAAAGATTTTGATTTGTGGTGTGTGTGTGCTTTAAATCGTTTTCTTCCCTTTCAACACCTGTTCCCTCAGCATTCTTTTTACAGCTTTCACGTGTGTTTGACACAATCTTTCCTTATCA   CAGCAGCTTAGGTGTGTTCGATTACATTTCTTTCACCCTTTTGAAAAAAGCCGAACCACGCCCGATATACGCGCGACATTCCATTACAGGGTGATATTTG ATTAGATAGTAAGCTCCCAAAAATTGCATATCCCAGTGGCTGTGGCGACGTTCGTCCTTATCGGTGACCATTGTAAAAAAACAAACAAACAAAACAATAAAAATACATACTAATATTAGTTGCTGGTGATAAAACAAAAAAACACAGTGGGACGGGGACACACGATATTCTCTCGTGGAGAGTAGAGTAGAGCGGGCTCGTGTAATGCCACGGGTAATTAGATTAGGACAGCAGCAGCAATCGGCAACCATGTTGGGGGTAAGAAATAGGGGCTAACAACCGAACGGNTAACNACCCATCGGTTTTAACAGTCTGTGAAGGATACGAGGAACGTTCGATGGGAA                                  ]
[-] EMBL CNS08M5O             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         aaACCCATCGGTTTTAACAGTCTGTGAAGGATACGAGGAACGCTCGATGGGAAGCGTAGCCCTTTGTTTGTTTGTGTGCGTAAATGT]


>consensus_7480#1 CCGGGAATTCCGTACGTTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAA GACGGAGGAATCAGTTATCGAGGTGCCGCTCAAGAGAGTGTCCTCCCATCAGGTGGACGA GTCCGGGTTCATCACCTGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTA CTCGTACTTCAAGACGAAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGA CGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGG TGCTACGGCGGAAGATTGAAAGCAGGGAAAGGTTCCAAACACAAGTGCGCTTTATGCTTT TAAAAGAACACGGTCAGTTGTCCTTTGGTACTCACACAAAAACGAACATCAAGGGAATAG AGTGTTGCGGTACTATTACATACAGAGGGATGCATCGGGTTAGGGCTGATAAAACGGTAT TGCATTCTCAAAACAAACGTAGTGATGAACCGTCGCGCAAAAATGTCGTGAGCCAAAGAT TTTGATTTGTGGTGTGTGTGTGCTTTAAATCGTTTTCTTCCCTTTCAACACCTGTTCCCT CAGCATACTTTTTACAGCTTTCACGTGTGTTTGACACAATCTTTCCTTATCACCGCAGCA GCTTAGGTGCGTTTGATTCCATTTCTTTCACCCTTTTGAAAAAAGCCGAAACATGCCCGA TATACGCGCGACATTCCATTACAGGGTGATATTTGCATTAGATAGTAAGCTCCCAAAAAT TGCATATCCCAGTGGCTGTGGCGACGTTCGTCCTTATCGGTGACATTGTAAAAAAAGCAA ACAAAACAATAAAAATACATACTAATATTAGTTGCTGGTGATAAAACAAAAAAACACAGT GGGACGGGGACACACGATATTCTCTCGTGGAGAGTAGAGTAGAGCGGGCTCGTGTAATGC CACGGGTAATTAGATTAGGACAGCAGCAGCAATCGGCAACCATGTTGGGGGTAAGAAATA GGGGCTAACAACCGAACGGNTAACNACCCATCGGTTTTAACAGTCTGTGAAGGATACGAG GAACGTTCGATGGGAAGCGTAGCCCTTTGTTTGTTTGTGTGCGTAAATGT



consensusID : consensus_7480#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 784
fasta sequence
                              [GAATCCCCCGAGGTTNACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACNTCCCCGGCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTGGACGGCGAGTCATCTGATGGCTGGACAGGGTGCGCTTTGTACTTTTAAAAGAACACGGTCAGTTGTCCTTGGTACTCACACAAAAACGAACATAAAGGGAATAGTGTTGCGGTACTACATACAGCGGGGATGCATCGGGATAGGGTTGATAAAATGGTATTGCATTCTCAAAACAAACGTAAAGTGATGAACCGTCGCGCAAAANATGTCGTGAGCCAAAGATTTCTGAGTTGTATGTGTGTGTGCTNTTAAATCGTTTTCTTCCCTTCCAANATCTGTTCCCTCAGGCATACTTTTNACAGCNTTTCACAGTGTGTTTGACACAATCTTTCCTTATCACCGCAGCAGCTTAGGTGCGTTGATTCCATTTCTTTTGCTCTTTCGAAAAAAGCCGAAACACGCCCGATATACGCGCGACATTCCATTACAGGGTGATATTGATTAGATAGTAAGCTCCCAAAAATTGCATATCCTAGTGGCTGTGGCGACGTNCGGTCCATTATACGGTGACCATNCGNAACACACACAGCAAACAAACCAAAACAAATCANAAANACATACTAAATATCCNAGCTCGCGGTGCANAAAACAAAAAACACACAGGGGGACCGGGGGACCACACGANAATCCCACGCGGCGANAAGTCGAGCGANCCCCGTGNAAAGGCCACGGCGGACACAANATCAC]

[+] EMBL AL930868             [GAATCCCCCGAGGTTNACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACNTCCCCGGCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTGGACGGCGAGTCATCTGATGGCTGGACAGGGTGCGCTTTGTACTTTTAAAAGAACACGGTCAGTTGTCCTTGGTACTCACACAAAAACGAACATAAAGGGAATAGTGTTGCGGTACTACATACAGCGGGGATGCATCGGGATAGGGTTGATAAAATGGTATTGCATTCTCAAAACAAACGTAAAGTGATGAACCGTCGCGCAAAANATGTCGTGAGCCAAAGATTTCTGAGTTGTATGTGTGTGTGCTNTTAAATCGTTTTCTTCCCTTCCAANATCTGTTCCCTCAGGCATACTTTTNACAGCNTTTCACAGTGTGTTTGACACAATCTTTCCTTATCACCGCAGCAGCTTAGGTGCGTTGATTCCATTTCTTTTGCTCTTTCGAAAAAAGCCGAAACACGCCCGATATACGCGCGACATTCCATTACAGGGTGATATTGATTAGATAGTAAGCTCCCAAAAATTGCATATCCTAGTGGCTGTGGCGACGTNCGGTCCATTATACGGTGACCATNCGNAACACACACAGCAAACAAACCAAAACAAATCANAAANACATACTAAATATCCNAGCTCGCGGTGCANAAAACAAAAAACACACAGGGGGACCGGGGGACCACACGANAATCCCACGCGGCGANAAGTCGAGCGANCCCCGTGNAAAGGCCACGGCGGACACAANATCAC]


>consensus_7480#2 GAATCCCCCGAGGTTNACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACNTCCCCGGC GGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTGGACGGCGAGTCATCTGATGGCTG GACAGGGTGCGCTTTGTACTTTTAAAAGAACACGGTCAGTTGTCCTTGGTACTCACACAA AAACGAACATAAAGGGAATAGTGTTGCGGTACTACATACAGCGGGGATGCATCGGGATAG GGTTGATAAAATGGTATTGCATTCTCAAAACAAACGTAAAGTGATGAACCGTCGCGCAAA ANATGTCGTGAGCCAAAGATTTCTGAGTTGTATGTGTGTGTGCTNTTAAATCGTTTTCTT CCCTTCCAANATCTGTTCCCTCAGGCATACTTTTNACAGCNTTTCACAGTGTGTTTGACA CAATCTTTCCTTATCACCGCAGCAGCTTAGGTGCGTTGATTCCATTTCTTTTGCTCTTTC GAAAAAAGCCGAAACACGCCCGATATACGCGCGACATTCCATTACAGGGTGATATTGATT AGATAGTAAGCTCCCAAAAATTGCATATCCTAGTGGCTGTGGCGACGTNCGGTCCATTAT ACGGTGACCATNCGNAACACACACAGCAAACAAACCAAAACAAATCANAAANACATACTA AATATCCNAGCTCGCGGTGCANAAAACAAAAAACACACAGGGGGACCGGGGGACCACACG ANAATCCCACGCGGCGANAAGTCGAGCGANCCCCGTGNAAAGGCCACGGCGGACACAANA TCAC



consensusID : consensus_7480#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 561
fasta sequence
                              [GAGGCAAGAATCGGCACGTAGGAGGATGCGGGCTGTTTCTTGAAGTGGGAATTCCGTACGTTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTCATCGAGGTGCCGCTCAAGCGAGTGTCCTCCCATCAGGTGGACGAGTCTGGGTTTATCACCTGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACGAAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTTGGACGGCGAGTCATCTGATGGCTGGACAGGGTGCGCTTTGTACTTTTAAAAGAACACGGTCAGTTGTCCTTTGGTACTCACACAAAAACGAACATAAAGGGAATAGTGTTGCGGTACTACATACAGCGGGGATGCATCGGGATAGGGTTGATAAAATGGTATTGCATTCTCAAAAGCAAACGTAAA]

[+] EMBL BX468342             [GAGGCAAGAATCGGCACGTAGGAGGATGCGGGCTGTTTCTTGAAGTGGGAATTCCGTACGTTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTCATCGAGGTGCCGCTCAAGCGAGTGTCCTCCCATCAGGTGGACGAGTCTGGGTTTATCACCTGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACGAAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATGGCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGGTAGTACGGCCGAGGATTGAACCCCGAAGTTTGGACGGCGAGTCATCTGATGGCTGGACAGGGTGCGCTTTGTACTTTTAAAAGAACACGGTCAGTTGTCCTTTGGTACTCACACAAAAACGAACATAAAGGGAATAGTGTTGCGGTACTACATACAGCGGGGATGCATCGGGATAGGGTTGATAAAATGGTATTGCATTCTCAAAAGCAAACGTAAA]


>consensus_7480#3 GAGGCAAGAATCGGCACGTAGGAGGATGCGGGCTGTTTCTTGAAGTGGGAATTCCGTACG TTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTC ATCGAGGTGCCGCTCAAGCGAGTGTCCTCCCATCAGGTGGACGAGTCTGGGTTTATCACC TGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACG AAAAAGATCCGCTACTCCGTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGATG GCCCCGATTGCCGTGACGGAGGAGGAAACGTCCCCGGCGGACGGTAGTACGGCCGAGGAT TGAACCCCGAAGTTTGGACGGCGAGTCATCTGATGGCTGGACAGGGTGCGCTTTGTACTT TTAAAAGAACACGGTCAGTTGTCCTTTGGTACTCACACAAAAACGAACATAAAGGGAATA GTGTTGCGGTACTACATACAGCGGGGATGCATCGGGATAGGGTTGATAAAATGGTATTGC ATTCTCAAAAGCAAACGTAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7480#1      --------------------------------------------CCGGGAATTCCGTACG 16
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      GAGGCAAGAATCGGCACGTAGGAGGATGCGGGCTGTTTCTTGAAGTGGGAATTCCGTACG 60
consensus_7480#0      ------------------------------------------------------------
                                                                                  

consensus_7480#1      TTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTT 76
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      TTCGATCACGACATCAAGTTCGGCGTGAAGTGCGTGAACAAGAAGACGGAGGAATCAGTC 120
consensus_7480#0      ------------------------------------------------------------
                                                                                  

consensus_7480#1      ATCGAGGTGCCGCTCAAGAGAGTGTCCTCCCATCAGGTGGACGAGTCCGGGTTCATCACC 136
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      ATCGAGGTGCCGCTCAAGCGAGTGTCCTCCCATCAGGTGGACGAGTCTGGGTTTATCACC 180
consensus_7480#0      ------------------------------------------------------------
                                                                                  

consensus_7480#1      TGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACG 196
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      TGCCAGCCGGGATGCACATATCACGTGCTGTTCGACAATTCGTACTCGTACTTCAAGACG 240
consensus_7480#0      ---------------------------------------GGCAGAATNCCCCGCAGTTAN 21
                                                                                  

consensus_7480#1      AAAAAGATCCGCTACTCCG-TGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGAT 255
consensus_7480#2      ---------------------------------------GAATCCCCCGAGGTTNACGAT 21
consensus_7480#3      AAAAAGATCCGCTACTCCG-TGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGAT 299
consensus_7480#0      AAAAAGATCCGCTACTCCGCTGCTGATGACGGCGCCGCTCAACGACGAGGAGCAAACGAT 81
                                                              **   *  *  *   *****

consensus_7480#1      GGCCCCGATTGCCGTGACGGAGGAGG-AAACGT-CCCCGGCGGACGGTGCTACGGCGGAA 313
consensus_7480#2      GGCCCCGATTGCCGTGACGGAGGAGG-AAACNT-CCCCGGCGGACGGTAGTACGGCCGAG 79
consensus_7480#3      GGCCCCGATTGCCGTGACGGAGGAGG-AAACGT-CCCCGGCGGACGGTAGTACGGCCGAG 357
consensus_7480#0      GGCCCCGATTGCCGTGACGGAGGAGNGAAACGTACCCCGGCGGACGGTAGTACGGCCGAG 141
                      *************************  **** * **************  ****** ** 

consensus_7480#1      GATTGAAAGCAG----------GGAAAGGTTCCAA---AC------ACAA--G-TGCGCT 351
consensus_7480#2      GATTGAACCCCGAAGTT-GGACGGCGAGTCATCTG---ATGGCTGGACAG--GGTGCGCT 133
consensus_7480#3      GATTGAACCCCGAAGTTTGGACGGCGAGTCATCTG---ATGGCTGGACAG--GGTGCGCT 412
consensus_7480#0      GATTGAACCCCGAAGTTTGGACGGCGAGTCATCTGCATAGGCTAGGACAGTGGATGCGCT 201
                      *******  * *          **  **    *     *       ***   * ******

consensus_7480#1      TT--ATGCTTT-TAAAAGAACACGGT-CAGTT---GTCCTTTGGTACT-CACA--CAAAA 401
consensus_7480#2      TT--GTACTTT-TAAAAGAACACGGT-CAGTT---GTCCTT-GGTACT-CACA--CAAAA 182
consensus_7480#3      TT--GTACTTT-TAAAAGAACACGGT-CAGTT---GTCCTTTGGTACT-CACA--CAAAA 462
consensus_7480#0      ATATGTACTTTATAAAAGAACACGGTACAGTNTGTACCTTTTGGTACTACACCACCAAAA 261
                       *   * **** ************** ****      * ** ****** ***   *****

consensus_7480#1      AC-----GAACATCAA---GGGAATAGAGTGTTGCGGTACTATTACATACAG-AGGGATG 452
consensus_7480#2      AC-----GAACATAAA---GGGAATAG--TGTTGCGGTACTA---CATACAGCGGGGATG 229
consensus_7480#3      AC-----GAACATAAA---GGGAATAG--TGTTGCGGTACTA---CATACAGCGGGGATG 509
consensus_7480#0      ANAACCGGAACATTAACAGGGGAATAGTGT-TTGCGGTACTTA-ACATACAG--GCGGGG 317
                      *      ****** **   ********  * **********    *******  * *  *

consensus_7480#1      CATCGGGTTAGGGCTGATAAAACGGTATTGCATTCTCAAAA-CAA---ACGTA--GTGAT 506
consensus_7480#2      CATCGGGATAGGGTTGATAAAATGGTATTGCATTCTCAAAA-CAA---ACGTAAAGTGAT 285
consensus_7480#3      CATCGGGATAGGGTTGATAAAATGGTATTGCATTCTCAAAAGCAA---ACGTAAA----- 561
consensus_7480#0      GATTGCAATTCGGGGAATAAGG-GGTTTTGGACTCACACCAATGGGTTACTTCTGGCCAT 376
                       ** *   *  **   ****   *** *** * ** **  *       ** *        

consensus_7480#1      GAACCGTCG---CGCAAAAA-TGTCGTGAGCCAAA---GATTT-TGATTTGTGGTGTGTG 558
consensus_7480#2      GAACCGTCG---CGCAAAANATGTCGTGAGCCAAA---GATTTCTGAGTTGTA-TGTGTG 338
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      TTCCTTCCAAAACACCCAACACACGGTACAACAGGTTGGAATTGGAAACCCTGGTACTGG 436
                                                                                  

consensus_7480#1      TGTGCTTT-AAATCGTTTTCTT-------CCCTTTCAACACCTGTTCCCTCAG-CATACT 609
consensus_7480#2      TGTGCTNTTAAATCGTTTTCTT-------CCCTTCCAANATCTGTTCCCTCAGGCATACT 391
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      CGGCAACTAAAATNGGTACCGATGGACGGCCCACACAGGGAATNANCTGGNAGCTATA-T 495
                                                                                  

consensus_7480#1      TTTTACAGCTTT-CAC-GTGTG---TTTGACACAATCTTTCCTTATCACCGCAGCAGC-T 663
consensus_7480#2      TTTNACAGCNTTTCACAGTGTG---TTTGACACAATCTTTCCTTATCACCGCAGCAGC-T 447
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      GGCGACGGCGGTAGGTTGGTTGGCCTNTCTCACCACNCTTCCTTCANATACCTAAACCGC 555
                                                                                  

consensus_7480#1      TAGGTGCGTTTGATTCCATTTCTTT----CACCCTTTTGAAAAAAGCCGAAACATGCCCG 719
consensus_7480#2      TAGGTGCGTT-GATTCCATTTCTTT----TGCTCTTTCGAAAAAAGCCGAAACACGCCCG 502
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      CAGTTATACCAAAACGCAATTCGATGGTATACCCCTNCCAAGGAAATAAACATATAAATA 615
                                                                                  

consensus_7480#1      ATATACGCGCGACATTCCATT--ACAGGGTGATATTTGCATTAGATAGT--AAGCTCCCA 775
consensus_7480#2      ATATACGCGCGACATTCCATT--ACAGGGTGATATT--GATTAGATAGT--AAGCTCCCA 556
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      TAACAAAGGCTATATCAAACGGGATNGGTAGGCNTTACTAGGAANCAACCAAAACTACCG 675
                                                                                  

consensus_7480#1      AAAATTG----CATATCCCAGTGGCTGTGGCGACGTTCGTCC--TTAT-CGGTGACATTG 828
consensus_7480#2      AAAATTG----CATATCCTAGTGGCTGTGGCGACGTNCGGTCCATTATACGGTGACCATN 612
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      NNTNTCCACGTTAANTTCGAACCCCGGCCACAGNCNACGGCCTTTNAAGCNGGTNGGCCG 735
                                                                                  

consensus_7480#1      TAAAAAA-----AGCAAAC---AAAACAA-------TAAAAATACATACTAA---TATTA 870
consensus_7480#2      CGNAACACACACAGCAAAC---AAACCAAAACAAATCANAAANACATACTAAATATCCNA 669
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      CTATCCATGGANAGCATCCCCGANTCTGNCACCTATCGACGAGGCGTTCCNTG---NCAN 792
                                                                                  

consensus_7480#1      GTTGCTGGTG-ATAAAACAAAAAA-ACACAGTGGGACGGGGA---CACAC--GATATTCT 923
consensus_7480#2      GCTCGCGGTGCANAAAACAAAAAACACACAGGGGGACCGGGGGACCACAC--GANAATCC 727
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      TCTGNGAACACAGNNCAACNAACANGCGCCGCGTGTACAATAGCTCANATCTGTGCCTCC 852
                                                                                  

consensus_7480#1      CTCGTGGAGAGTAGAGTAGA-GCGGGCTC-GTGTAATGCCACGGGTAATTAGATTAGGAC 981
consensus_7480#2      CACGCGGCGAN--AAGTCGA-GCGANCCCCGTGNAAAGGCCACGGCGGACACAANATCAC 784
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      CCCNTGACACATANGCTTAACGCAGGNCGACACCCGNGANACCCACCGTTTTCGCCCCNG 912
                                                                                  

consensus_7480#1      AGCAGCAGCAATCGGCAACCATGTTGGGGGTAAGAAATAGGGGCTAACAACCGAACGGNT 1041
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      ATTATANAAACCCAAGGGGCGNCTTGGCAAGACNNACCTTTGCTCAGGGAAGTTTGTAAG 972
                                                                                  

consensus_7480#1      AACNACCCATCGGTTTTAACAGTCTGTGAAGGATACGAGGAACGTTCGATGGGAAGCGTA 1101
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      NCAACTNTAGTGATTACAGGGCCTTACCCACGCAAAAACGAGATCATTATGGGCAANTTN 1032
                                                                                  

consensus_7480#1      GCCCTTTGTTTGTTTGTGTGCGTAAATGT------------------------------- 1130
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      ACTTCCCGCTNAATGATGGGGTCTTGTATGTGNCTTGNAANCCGGTTTACAGGGATCGCC 1092
                                                                                  

consensus_7480#1      ------------------------------------------------------------
consensus_7480#2      ------------------------------------------------------------
consensus_7480#3      ------------------------------------------------------------
consensus_7480#0      CGTATTAACTTCGGGGGGGAGGACCCAANGTATGGTGTTGAGACGAGATCACNCATGCAC 1152
                                                                                  

consensus_7480#1      --------------------------------------------
consensus_7480#2      --------------------------------------------
consensus_7480#3      --------------------------------------------
consensus_7480#0      ACGCACACGNACCACAACAGGCACAAGTNAAAAAATAGTNNACA 1196
                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)