cluster # 7526

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Anopheles gambiae
cluster # 7526 cluster # 7526 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7526#0 length = 785 sequences # 6

consensus_7526#1 length = 692 sequences # 1

consensusID : consensus_7526#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 785
fasta sequence

                              [TTTATCGCTGACTTCAGAGTGTACAAGGCGCTTCGTAGACGAAACCCCCAGTCGCAACGATGCCGAAACCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGG-AAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCTTTATCCCGATGGAAAGGTCCGAGTTCCCGCGGGTGCACGGGTGGATCGAGCGGATGAAGCAGTTGCCGTACTATGAGGAGATCAACGGTGCCGGTGCCACAGAGCTGGCCGAGTTCATTGTGGATATGTTGGCGAAGAATGCAAAACTGTAACAGGGTCATGCTATTCGCGGTTGTTAACTAGTCNAATAAAGTGTAGGATTT]

[+] EMBL BX627468             [TTTATCGCTGACTTCAGAGTGTACAAGGCGCTTCGTAGACGAAACCCCCAGTCGCAACGATGCCGAAACCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGGAAAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTC                                                                                                                                                                                                                                  ]
[+] EMBL BX616021             [                         AGGCGCTTCGTAGACGAAACCCCCAGTCGCAACGATGCCGAAACCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGG                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AL933312             [                       ccgaggtCTTCGTAGACGAAACCCCCAGTCGCAACGATGCCGAAACCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGG AAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGA                                                                                                                                                                                                                                                           ]
[+] EMBL AF316635             [                                                                    CCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGG AAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCTTTATCCCGATGGAAAGGTCCGAGTTCCCGCGGGTGCACGGGTGGATCGAGCGGATGAAGCAGTTGCCGTACTATGAGGAGATCAACGGTGCCGGTGCCACAGAGCTGGCCGAGTTCATTGTGGATATGTTGGCGAAGAATGC                                                             ]
[+] EMBL BX624503             [                                                                            ATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGG AAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCTTTATCCCGATGGAAAGGTCCGAGTTCCCGCGGGTGCACGGGTGGATCGAGCGGATGAAGCAGTTGCCGTACTATGAGGAGATCAACGGTGCCGGTGCCACAGAGCTGGCCGAGTTCATTGTGGATATGTTGGCGAAGAATGCAAAACTGTAACAGGGTCATGCTATTCGCGGTTGTTAACTAGTCNAATAAAGTGTAGGATTT]
[+] EMBL BX628863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGG AAGACTCGCTGCAGAACGATTACGTANCCGGATCACNCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCTTTATCCCGATGGAANGGTCCNAGTTCCCGCGGGTGCACGGGTGGATCCAGCGGATGAAGCAGTTGCCGTACTATGAGGAGATCAACGGTGCCNGTGCCACAGAGCTGGCCGAGTTCATTGTGGATATGTTGGCGANAAATGCAAAACTGTAACAGGNTCATGCTATTCG                                  ]




>consensus_7526#0
TTTATCGCTGACTTCAGAGTGTACAAGGCGCTTCGTAGACGAAACCCCCAGTCGCAACGA
TGCCGAAACCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGA
CGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAA
ATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATA
ATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCC
AGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATG
AGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGG
TATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGT
ACCGGTTGCTGGAAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCG
CTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCTTTATCCCGATGGAAAGGT
CCGAGTTCCCGCGGGTGCACGGGTGGATCGAGCGGATGAAGCAGTTGCCGTACTATGAGG
AGATCAACGGTGCCGGTGCCACAGAGCTGGCCGAGTTCATTGTGGATATGTTGGCGAAGA
ATGCAAAACTGTAACAGGGTCATGCTATTCGCGGTTGTTAACTAGTCNAATAAAGTGTAG
GATTT

consensusID : consensus_7526#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence

                              [CAAGAATCGGCACGNAGGCAGTCGCAACGATGCCGAAACTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGGAAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCGTTTATACCCGATTGGAAAAGGTCCGAGTTCCCCGCGGGTGCACAGGGTGGATCGAAGCGGATNAAGCAGTTGCGTACTATGAGGAGATCAACGGTGCCGGTGCCAACAGAGCTGGCCGAAGNTCATGTGGNATATTGTGGG]

[+] EMBL BX469882             [CAAGAATCGGCACGNAGGCAGTCGCAACGATGCCGAAACTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGGAAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCGTTTATACCCGATTGGAAAAGGTCCGAGTTCCCCGCGGGTGCACAGGGTGGATCGAAGCGGATNAAGCAGTTGCGTACTATGAGGAGATCAACGGTGCCGGTGCCAACAGAGCTGGCCGAAGNTCATGTGGNATATTGTGGG]




>consensus_7526#1
CAAGAATCGGCACGNAGGCAGTCGCAACGATGCCGAAACTGTGCTATACACGGTTCATCT
GAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCAAAAGCGCTTGGATTGGAGTTAGAGCG
CAAGCTTGTGAACTTACTTGCTGGGGAAAATTTAACACCTGAGTTCTTGAAGCTCAATCC
TAAGCATACGATCCCCGTGCTGGACGATAATGGGACGATCATCAGCGAAAGCCACGCGAT
CATGATCTATCTCGTGCGTAAGTACGGCCAGGGCGAAGGGAAGGATGCGCTGTACCCAAC
GGACATTGTCGAGCAGGCTCGGGTCAATGAGGCACTGCACTTCGAGTCCGGTGTGCTGTT
TGCTCGGTTGCGATTCATTACCGAGCTGGTATTTTTCGCACGCAAACCAGAAATTCCGGA
AGATCGCATCGAGTACGTTCGTACGGCGTACCGGTTGCTGGAAGACTCGCTGCAGAGCGA
TTACGTAGCCGGATCACGCATGACGATCGCTGACCTGAGCTGCATTTCCTCGGTCGCCTC
TATGGTGGGCGTTTATACCCGATTGGAAAAGGTCCGAGTTCCCCGCGGGTGCACAGGGTG
GATCGAAGCGGATNAAGCAGTTGCGTACTATGAGGAGATCAACGGTGCCGGTGCCAACAG
AGCTGGCCGAAGNTCATGTGGNATATTGTGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7526#0      TTTATCGCTGACTTCAGAGTGTACAAGGCGCTTCGTAGACGAAACCCCCAGTCGCAACGA 60
consensus_7526#1      -----------------------CAAGAATCGGCACGNAGG-------CAGTCGCAACGA 30
                                             ****   *  *    * *       ************

consensus_7526#0      TGCCGAAACCTGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGA 120
consensus_7526#1      TGCCGAAAC-TGTGCTATACACGGTTCATCTGAGCCCACCGTGCCGTGCCGTGGAGCTGA 89
                      ********* **************************************************

consensus_7526#0      CGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAA 180
consensus_7526#1      CGGCAAAAGCGCTTGGATTGGAGTTAGAGCGCAAGCTTGTGAACTTACTTGCTGGGGAAA 149
                      ************************************************************

consensus_7526#0      ATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATA 240
consensus_7526#1      ATTTAACACCTGAGTTCTTGAAGCTCAATCCTAAGCATACGATCCCCGTGCTGGACGATA 209
                      ************************************************************

consensus_7526#0      ATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCC 300
consensus_7526#1      ATGGGACGATCATCAGCGAAAGCCACGCGATCATGATCTATCTCGTGCGTAAGTACGGCC 269
                      ************************************************************

consensus_7526#0      AGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATG 360
consensus_7526#1      AGGGCGAAGGGAAGGATGCGCTGTACCCAACGGACATTGTCGAGCAGGCTCGGGTCAATG 329
                      ************************************************************

consensus_7526#0      AGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGG 420
consensus_7526#1      AGGCACTGCACTTCGAGTCCGGTGTGCTGTTTGCTCGGTTGCGATTCATTACCGAGCTGG 389
                      ************************************************************

consensus_7526#0      TATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGT 480
consensus_7526#1      TATTTTTCGCACGCAAACCAGAAATTCCGGAAGATCGCATCGAGTACGTTCGTACGGCGT 449
                      ************************************************************

consensus_7526#0      ACCGGTTGCTGGAAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCG 540
consensus_7526#1      ACCGGTTGCTGGAAGACTCGCTGCAGAGCGATTACGTAGCCGGATCACGCATGACGATCG 509
                      ************************************************************

consensus_7526#0      CTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGC-TTTAT-CCCGAT--GGAA 596
consensus_7526#1      CTGACCTGAGCTGCATTTCCTCGGTCGCCTCTATGGTGGGCGTTTATACCCGATTGGAAA 569
                      ***************************************** ***** ******  * **

consensus_7526#0      AGGTCCGAGTTCCC-GCGGGTGCAC-GGGTGGATCGA-GCGGATGAAGCAGTTGCCGTAC 653
consensus_7526#1      AGGTCCGAGTTCCCCGCGGGTGCACAGGGTGGATCGAAGCGGATNAAGCAGTTGC-GTAC 628
                      ************** ********** *********** ****** ********** ****

consensus_7526#0      TATGAGGAGATCAACGGTGCCGGTGCCA-CAGAGCTGGCCGAGTTCATTGTGGATATGTT 712
consensus_7526#1      TATGAGGAGATCAACGGTGCCGGTGCCAACAGAGCTGGCCGAAGNTCATGTGGN-ATATT 687
                      **************************** *************      *****  ** **

consensus_7526#0      GGCGAAGAATGCAAAACTGTAACAGGGTCATGCTATTCGCGGTTGTTAACTAGTCNAATA 772
consensus_7526#1      GTGGG------------------------------------------------------- 692
                      *  *                                                        

consensus_7526#0      AAGTGTAGGATTT 785
consensus_7526#1      -------------