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Anopheles gambiae
cluster # 7549 cluster # 7549       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7549#0 length = 1768 sequences # 5  
consensus_7549#1 length = 1482 sequences # 1  
consensus_7549#2 length = 1105 sequences # 1  

consensusID : consensus_7549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1768
fasta sequence
                              [CCGTATCTCTCTTATGGACATTGTAGAAGATATTCTACAGGTATTGGACCGATACGCACCGCGATATAAATCCCCCATCGGAATATGGATGGGACCACAGCTGATTGTCGGTATCAAGGACAATCCTGACTATTTCCAAACGGTCATGAACTCACCGCACATGTTGAACAAAATGGATCAGTACAACTTTTTCCGGATTGTCAATGGACTTTTCGCTGCGCCAGATCATACGTGGAAAAATGAACGCAAGCTGCTCAATCGCTCATTCAGCCCAACGATGCTGTCCAGCTTTGTGGATATTTTCAACGATAAAGACTTTATAATGGTCGAGAATCTGCGGAAATTCGTCGGAAATGGTGAAGTTGATTTACATTTGTACATAGCCAAGTGTACCATCGATTCGATATTTGGAACGGCCTTTGGCAAGGATCTCAACACGCAAGGAAACGATGGCGCTGACGAGTACCTGCATTGTCTAGACACATTTTTTTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTATCTATCGCCTTACGAAGGATTACGAGCTTGAAACGAATTGTGTAAACATCATCAGAAACATGTCGCTGGACCTTATGAAAGAGTTGAAAGAAAATTACAAAAACTCTAAGGCTACAGTGAAAGAAGATGCGTACGAGCGCAAGCCGGCTCTGAATTTTGCTGAAAATTTATTTGAGTTGGCAGAAAACAATCCCTCCCTACCAGAAGATCATATAAAAGACCACATAGATACGATGATTGTAGCTGGTCACGATACGACTGCCACCACCATGTCGAACCTGCTGCTAATGCTGGCGATGCATCCCGAGGTGCAGGAAATGGTGTACCAGGAGGTGATGAGCGTGTGTCCAGACAAATCGAAACCTGTAACAATGGAAGATGTCAACAATCTCGTGTACACGGAGATGGTGTGCAAAGAAACGATGCGTCTGTTTCCTGTTGGCCCTCTGATCGGCAGAAAGTGTGTTGCAGATGTTAAGCTGGATGATAAACACACCATTCCGGCGGGCTGCTGTGTAGCGCTCGGCATCTATCAGATACATCGAGACCCGACGATCTGGGGACCCGAGCCGGGAAAGTTCAATCCCGATCACTTCCTGCCGGAAAGGGTAGCTGAGCGACATCCTTACGCGTATCTACCGTTCAGTGGAGGACCTCGGAACTGTATCGGTATCCGGTATGCTTGGCTGTCGATGAAAATTCTCATCGCACATCTGGTGCGAAACTATCGCTTCAAGACGACGCTCAAGATGGAGGACTTGGAGATAAAGTTTGCAATCATTCTAAGAATCATGAACGGCTGTCTCGTGTCAATTGAAGATCGTAGCTGTAGTCCTGTTTAGTTAGGGTGCCTGAACCAGCTGTAGCAGCTGGCTCGATTAAATTGTGTCCAGGAGCATAATGTAATCTGCCATACTTACTGGTTACAGCTACTGTGTAAACGCTAACTTCCGAACTAGATGATCTTCTTGAGTTGATATCCTATATCGCTATAACCAGAAACGAACGGCTTGTGATCGCACAATGGTGACAAAGCGTTATGAAATGGCTGATGAAAATGTAACTCAAAACGAAAAAAGGCGTTTCTACTACATAGGCACAGCAAACCCATCCTAATAATTTACACCTTGAAATAAGTACAGATCGTAAGTTACATGCAATAAACCCTAAATTCGTTTGTAATACATACAAAAGTTCCAAGTGTGCAATAAACCATTCGTAGTGTGGTT]

[+] EMBL BM645882             [CCGTATCTCTCTTATGGACATTGTAGAAGATATTCTACAGGTATTGGACCGATACGCACCGCGATATAAATCCCCCATCGGAATATGGATGGGACCACAGCTGATTGTCGGTATCAAGGACAATCCTGACTATTTCCAAACGGTCATGAACTCACCGCACATGTTGAACAAAATGGATCAGTACAACTTTTTCCGGATTGTCAATGGACTTTTCGCTGCGCCAGATCATACGTGGAAAAATGAACGCAAGCTGCTCAATCGCTCATTCAGCCCAACGATGCTGTCCAGCTTTGTGGATATTTTCAACGATAAAGACTTTATAATGGTCGAGAATCTGCGGAAATTCGTCGGAAATGGTGAAGTTGATTTACATTTGTACATAGCCAAGTGTACCATCGATTCGATATTTGGAACGGCCTTTGGCAAGGATCTCAACACGCAAGGAAACGATGGCGCTGACGAGTACCTGCATTGTCTAGACACATTTTTTTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTATCTATCGCCTTACGAAGGATTACGAGCTTGAAACGAATTGTGTAAACATCATCAGAAACATGTCGCTGGACCTTATGAAAGAGTTGAAAGAAAATTACAAAAACTCTAAGGCTACAGTGAAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX625199             [                                                                                                                                                                                                                                                                                                                                                   GAAATTCGTCGGAAATGGTGAAGTTGATTTACATTTGTACATAGCCAAGTGTACCATCGATTCGATATTTGGAACGGCCTTTGGCAAGGATCTCAACACGCAAGGAAACGATGGCGCTGACGAGTACCTGCATTGTCTAGACACATTTTTCTCGCTAGTGTTTAAGCGCATTCTGCATCTGGAACGCTATTCGGAAAGTATCTATCGCCTTACGAAGGATTACGAGCATGAAACGAACTGTGTAAACATCATCAGAAACATGTCGCTGGACCTTATGAAAGAGTTGAAAGAAAATTACAAAAACTCTAAGGCTACAGTGAAAGAAGATGCGTACGAGCGCAAGCCGGCTCTGAATTTTGCTGAAAATTTATTTGAGTTGGCAGAAAACAATCCCTCCCTACCAGAAGATCATATAAAAGACCACATAGATACGATGATTGTAGCTGGTCACGATACGACTGCCACCACCATGTCGAACCTGCTGCTAATGCTGGCGATGCATCCCGAGGTGCAGGAAATGGTGTACCAGGAGGTGATGAGCGTGTGTCCAGACAAATCGAAACCTGTAACAATGGAAGATGTCAACAATCTCGTGTACACGGAGATGGTGTGCAAAGAAACGATGCGTCTGTTTCCTGTTGGCCCTCTGATCGGCAGAAAGTGTGTTGCAGATGTTAAGCTGGATGATAAACACACCATTCCGGCGGGCTGCTGTGTAGCGCTCGGCATCTATCAGATACATCGAGACCCGACGATCTGGGGA CCGAGCCGGGAAAGTTCAATCCCGATCACTTCCTGCCGGAAANGGTAGCTGAGCGACATCCTTACGCGTATCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM644335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgGATAAACACACCATTCCGGCGGGCTGCTGTGTAGCGCTCGGCATCTATCAGATACATCGAGACCCGACGATCTGGGGACCCGAGCCGGGAAAGTTTAATCCTGATCACTTCCTACCGGAAAGGGTAGCTGAGCGACATCCGTACGCGTATCTACCGTTCAGTGGAGGACCTCGGAACTGTATCGGTATCCGGTATGCTTGGCTGTCGATGAAAATTCTCATCGCACATCTGGTGCGAAACTATCGCTTCAAGACGACGCTCAAGATGGAGGACTTGGAGATAAAGTTTGCAATCATTCTAAGAATCATGAACGGCTGTCTCGTGTCAATTGAAGATCGTAGCTGTAGTCCTGTTTAGTTAGGGTGCCTGAACCAGCTGTAGCAGCTGGCTCGATCAAATTGTGTCCAGGAGCATAATGTAATCTGCCATACGTACTGGTTACAGCTACTGTGTAAACGCTAACTTCCGAACTAGATGATCTTCTTGAGTTGATATCCTATATCGCTATAACCAGAAACGAACGGCATGTAATCGCACAATGGTGACAAAGCGTTATGAAATGGCTGATG                                                                                                                                                                               ]
[+] EMBL BX623903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAACACACCATTCCGGCGGGCTGCTGTGTAGCGCTCGGCATCTATCAGATACATCGAGACCCGACGATCTGGGGACCCGAGCCGGGAAAATTCAATCCCGATCACTTCCTGCCGGAAAGGGTAGCTGAGCGACATCCTTACGCGTATCTACCGTTCAGTGGAGGACCTCGGAACTGTATCGGTATCCGGTATGCTTGGCTGTCGATGAAAATTCTCATCGCACATCTGGTGCGAAACTATCGCTTCAAGACGACGCTCAAGATGGAGGACTTGGAGATAAAGTTTGCAATCATTCTAAGAATCATGAACGGCTGTCTCGTGTCAATTGAAGATCGTAGCTGTAGTCCTGTTTAGTTAGGGTGCCTGAACCAGCTGTAGCAGCTGGCTCGATTAAATTGTGTCCAGGAGCATAATGTAATCTGCCATACTTACTGGTTACAGCTACTGTGTAAACGCTAACTTCCGAACTAGATGATCTTCTTGAGTTGATATCCTATATCGCTATAACCAGAAACGAACGGCTTGTGATCGCACAATGGTGACAAAGCGTTATGAAATGGCTGATGAAAAT                                                                                                                                                                          ]
[+] EMBL BM638674             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgTGTTTAGTTAGGGTGCCTGAACCAGCTGTAGCAGCTGGCTCGATTAAATTGTGTCCAGGAGCATAATGTAATCTGCCATACTTACTGGATACAGCTACTGTGTAAACGCTAACTTCCGAACTAGATGATCTTTTTGAGTTGATATCCTATATCGCTATAACCAGAAACGAACGGCTTGTGATCGCACAATGGTGACAAAGCGTTATGAAATGGCTGATGAAAATGTAACTCAAAACGAAAAAAGGCGTTTCTACTACATAGGCACAGCAAACCCATCCTAATAATTTACACCTTGAAATAAGTACAGATCGTAAGTTACATGCAATAAACCCTAAATTCGTTTGTAATACATACAAAAGTTCCAAGTGTGCAATAAACCATTCGTAGTGTGGTT]


>consensus_7549#0 CCGTATCTCTCTTATGGACATTGTAGAAGATATTCTACAGGTATTGGACCGATACGCACC GCGATATAAATCCCCCATCGGAATATGGATGGGACCACAGCTGATTGTCGGTATCAAGGA CAATCCTGACTATTTCCAAACGGTCATGAACTCACCGCACATGTTGAACAAAATGGATCA GTACAACTTTTTCCGGATTGTCAATGGACTTTTCGCTGCGCCAGATCATACGTGGAAAAA TGAACGCAAGCTGCTCAATCGCTCATTCAGCCCAACGATGCTGTCCAGCTTTGTGGATAT TTTCAACGATAAAGACTTTATAATGGTCGAGAATCTGCGGAAATTCGTCGGAAATGGTGA AGTTGATTTACATTTGTACATAGCCAAGTGTACCATCGATTCGATATTTGGAACGGCCTT TGGCAAGGATCTCAACACGCAAGGAAACGATGGCGCTGACGAGTACCTGCATTGTCTAGA CACATTTTTTTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTAT CTATCGCCTTACGAAGGATTACGAGCTTGAAACGAATTGTGTAAACATCATCAGAAACAT GTCGCTGGACCTTATGAAAGAGTTGAAAGAAAATTACAAAAACTCTAAGGCTACAGTGAA AGAAGATGCGTACGAGCGCAAGCCGGCTCTGAATTTTGCTGAAAATTTATTTGAGTTGGC AGAAAACAATCCCTCCCTACCAGAAGATCATATAAAAGACCACATAGATACGATGATTGT AGCTGGTCACGATACGACTGCCACCACCATGTCGAACCTGCTGCTAATGCTGGCGATGCA TCCCGAGGTGCAGGAAATGGTGTACCAGGAGGTGATGAGCGTGTGTCCAGACAAATCGAA ACCTGTAACAATGGAAGATGTCAACAATCTCGTGTACACGGAGATGGTGTGCAAAGAAAC GATGCGTCTGTTTCCTGTTGGCCCTCTGATCGGCAGAAAGTGTGTTGCAGATGTTAAGCT GGATGATAAACACACCATTCCGGCGGGCTGCTGTGTAGCGCTCGGCATCTATCAGATACA TCGAGACCCGACGATCTGGGGACCCGAGCCGGGAAAGTTCAATCCCGATCACTTCCTGCC GGAAAGGGTAGCTGAGCGACATCCTTACGCGTATCTACCGTTCAGTGGAGGACCTCGGAA CTGTATCGGTATCCGGTATGCTTGGCTGTCGATGAAAATTCTCATCGCACATCTGGTGCG AAACTATCGCTTCAAGACGACGCTCAAGATGGAGGACTTGGAGATAAAGTTTGCAATCAT TCTAAGAATCATGAACGGCTGTCTCGTGTCAATTGAAGATCGTAGCTGTAGTCCTGTTTA GTTAGGGTGCCTGAACCAGCTGTAGCAGCTGGCTCGATTAAATTGTGTCCAGGAGCATAA TGTAATCTGCCATACTTACTGGTTACAGCTACTGTGTAAACGCTAACTTCCGAACTAGAT GATCTTCTTGAGTTGATATCCTATATCGCTATAACCAGAAACGAACGGCTTGTGATCGCA CAATGGTGACAAAGCGTTATGAAATGGCTGATGAAAATGTAACTCAAAACGAAAAAAGGC GTTTCTACTACATAGGCACAGCAAACCCATCCTAATAATTTACACCTTGAAATAAGTACA GATCGTAAGTTACATGCAATAAACCCTAAATTCGTTTGTAATACATACAAAAGTTCCAAG TGTGCAATAAACCATTCGTAGTGTGGTT



consensusID : consensus_7549#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1482
fasta sequence
                              [ACNATCCTATAGGCCAGAATCGCCCCAGGGTTTATGCTGACTGAGTACTGCATTGTCTAGACACATTTTTCTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTATCTATACGCCTTACGAAGGATTACGAGCTTGCAAACGAAACTTGGTGTTAAACACCATTCATCCAGCACAACCATTGTCTGCTTGTGACCCTTCATCAACAGCAGTTTGCACACAGCACAACACATTCACCACAANAACTCCTCAAAGGCTCACCAGTGCACACAGGCAAAGCATTGCGGTTACGGAAACTGCCAAAGCCTGGGCTCCTTGAAATTTTATGGGGCANGCACACAGCCACATTTCTGGGTCACTGGACAGGTTCTGGAACCCAGGAAAGAAAACGAAATTTCGCCTTACCCCCCTTAAACCCAAAGTCACAAGGGATTCCACTCACTTNAACACAAGGAACCCCCACNAATTACAGCACTTTAACCGGGAGTTGGAATTTCCGGCTTACAGGCCGTTGGGGTCCTANANCAGCATTTAAACGCGGACACACTTATGGTCCCAAANCCTCAACGCCCAATTGGTTTAAGCCNAAAAACGCCCNTAGGGGATNTAGGGCGTTAACAATTTTGGCNTCTGGGGTGCCATACATGTGGACCATTAAACCCCACCCGGGAACNAGACTATGGGCAACATGGGGACAAACCGTTTGGGGCGATTAGTGTNAAACACCCCACAGCGAAGCTGCGTACGGCNATNTAGGAACGACCCGACTGAGTTCAGTTCCCCANAGGTGAACGACAANAAATTACCGCNTGACANAANCACACCCTTCGTTCAACTATCACACCCCNNAACTAGTAGTGGCGGACACAAGGGAACATTTTGGTTTCCCCAAAAGCAGCAAGAANTAGACCGTAACCCACGGCACTTAGGTATATAACACAANCAACANGGGAAAAAGANACAGATTTGGTGGGGATATAGNTCTTGACGGCAAACATCAAGGTAAAGANACAAACCCGTAGACATATGCCGACCNGNGTACACAACTNTTGGCCNNACATCACCCCCCAATTAGGGATAAAAGNGGAGACCACACACCNTTANCGNCATAGACAACTTACCCGATGNGAGCACAAGTACATANCACCANCNGAACGTNGGGNTGGCANAACNCGCGGCACCCACGCAGACACCTTTGGGTANTAACAACANGGCCCATTAGGGGNCACATTTTGGAACNATTCATACCNANAACANCGACAANNCAAAGNGCCCNACAAATCATATGCAACACCGCNGCGATCACAATCNCNACTNNNCACNTAATCGCACACCCTTACCGCAACGTCAGTCCATTAATCANACCGNGTCNTATCTCCGGAGCACCACACCGAANTCCCGCGCNNAACTGGCCAANCAGGACGANNATAAACGCAGCCGTATCCACTGNAGACAGCCAAAACACCACA]

[+] EMBL AL693831             [ACNATCCTATAGGCCAGAATCGCCCCAGGGTTTATGCTGACTGAGTACTGCATTGTCTAGACACATTTTTCTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTATCTATACGCCTTACGAAGGATTACGAGCTTGCAAACGAAACTTGGTGTTAAACACCATTCATCCAGCACAACCATTGTCTGCTTGTGACCCTTCATCAACAGCAGTTTGCACACAGCACAACACATTCACCACAANAACTCCTCAAAGGCTCACCAGTGCACACAGGCAAAGCATTGCGGTTACGGAAACTGCCAAAGCCTGGGCTCCTTGAAATTTTATGGGGCANGCACACAGCCACATTTCTGGGTCACTGGACAGGTTCTGGAACCCAGGAAAGAAAACGAAATTTCGCCTTACCCCCCTTAAACCCAAAGTCACAAGGGATTCCACTCACTTNAACACAAGGAACCCCCACNAATTACAGCACTTTAACCGGGAGTTGGAATTTCCGGCTTACAGGCCGTTGGGGTCCTANANCAGCATTTAAACGCGGACACACTTATGGTCCCAAANCCTCAACGCCCAATTGGTTTAAGCCNAAAAACGCCCNTAGGGGATNTAGGGCGTTAACAATTTTGGCNTCTGGGGTGCCATACATGTGGACCATTAAACCCCACCCGGGAACNAGACTATGGGCAACATGGGGACAAACCGTTTGGGGCGATTAGTGTNAAACACCCCACAGCGAAGCTGCGTACGGCNATNTAGGAACGACCCGACTGAGTTCAGTTCCCCANAGGTGAACGACAANAAATTACCGCNTGACANAANCACACCCTTCGTTCAACTATCACACCCCNNAACTAGTAGTGGCGGACACAAGGGAACATTTTGGTTTCCCCAAAAGCAGCAAGAANTAGACCGTAACCCACGGCACTTAGGTATATAACACAANCAACANGGGAAAAAGANACAGATTTGGTGGGGATATAGNTCTTGACGGCAAACATCAAGGTAAAGANACAAACCCGTAGACATATGCCGACCNGNGTACACAACTNTTGGCCNNACATCACCCCCCAATTAGGGATAAAAGNGGAGACCACACACCNTTANCGNCATAGACAACTTACCCGATGNGAGCACAAGTACATANCACCANCNGAACGTNGGGNTGGCANAACNCGCGGCACCCACGCAGACACCTTTGGGTANTAACAACANGGCCCATTAGGGGNCACATTTTGGAACNATTCATACCNANAACANCGACAANNCAAAGNGCCCNACAAATCATATGCAACACCGCNGCGATCACAATCNCNACTNNNCACNTAATCGCACACCCTTACCGCAACGTCAGTCCATTAATCANACCGNGTCNTATCTCCGGAGCACCACACCGAANTCCCGCGCNNAACTGGCCAANCAGGACGANNATAAACGCAGCCGTATCCACTGNAGACAGCCAAAACACCACA]


>consensus_7549#1 ACNATCCTATAGGCCAGAATCGCCCCAGGGTTTATGCTGACTGAGTACTGCATTGTCTAG ACACATTTTTCTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTA TCTATACGCCTTACGAAGGATTACGAGCTTGCAAACGAAACTTGGTGTTAAACACCATTC ATCCAGCACAACCATTGTCTGCTTGTGACCCTTCATCAACAGCAGTTTGCACACAGCACA ACACATTCACCACAANAACTCCTCAAAGGCTCACCAGTGCACACAGGCAAAGCATTGCGG TTACGGAAACTGCCAAAGCCTGGGCTCCTTGAAATTTTATGGGGCANGCACACAGCCACA TTTCTGGGTCACTGGACAGGTTCTGGAACCCAGGAAAGAAAACGAAATTTCGCCTTACCC CCCTTAAACCCAAAGTCACAAGGGATTCCACTCACTTNAACACAAGGAACCCCCACNAAT TACAGCACTTTAACCGGGAGTTGGAATTTCCGGCTTACAGGCCGTTGGGGTCCTANANCA GCATTTAAACGCGGACACACTTATGGTCCCAAANCCTCAACGCCCAATTGGTTTAAGCCN AAAAACGCCCNTAGGGGATNTAGGGCGTTAACAATTTTGGCNTCTGGGGTGCCATACATG TGGACCATTAAACCCCACCCGGGAACNAGACTATGGGCAACATGGGGACAAACCGTTTGG GGCGATTAGTGTNAAACACCCCACAGCGAAGCTGCGTACGGCNATNTAGGAACGACCCGA CTGAGTTCAGTTCCCCANAGGTGAACGACAANAAATTACCGCNTGACANAANCACACCCT TCGTTCAACTATCACACCCCNNAACTAGTAGTGGCGGACACAAGGGAACATTTTGGTTTC CCCAAAAGCAGCAAGAANTAGACCGTAACCCACGGCACTTAGGTATATAACACAANCAAC ANGGGAAAAAGANACAGATTTGGTGGGGATATAGNTCTTGACGGCAAACATCAAGGTAAA GANACAAACCCGTAGACATATGCCGACCNGNGTACACAACTNTTGGCCNNACATCACCCC CCAATTAGGGATAAAAGNGGAGACCACACACCNTTANCGNCATAGACAACTTACCCGATG NGAGCACAAGTACATANCACCANCNGAACGTNGGGNTGGCANAACNCGCGGCACCCACGC AGACACCTTTGGGTANTAACAACANGGCCCATTAGGGGNCACATTTTGGAACNATTCATA CCNANAACANCGACAANNCAAAGNGCCCNACAAATCATATGCAACACCGCNGCGATCACA ATCNCNACTNNNCACNTAATCGCACACCCTTACCGCAACGTCAGTCCATTAATCANACCG NGTCNTATCTCCGGAGCACCACACCGAANTCCCGCGCNNAACTGGCCAANCAGGACGANN ATAAACGCAGCCGTATCCACTGNAGACAGCCAAAACACCACA



consensusID : consensus_7549#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1105
fasta sequence
                              [TGCCCGAGGTTANTCTAAGGCTACAGTTGAAAGAAGATGCGTACGAGCGCAAGCCGGGTCTGAATTTTGCTGAAAATTGTATTTCGAGTTGGCAGAAAACGAATCNCTCCCTACCAGAAGGATCATATANNTGAGANCACNTAGATACGATGATTGTAGCTGGTCACGATACGATTGNCACCTACGCATGTCGAACCATGCTTGGTAATGCTGGTGGATTGCATCCCGAGGTGCAGGAATATGGTGTGCCATGAGTAGGTGATGANCGTGTGTCCAGACAAATCGAAACCTGTAACAATTGGTAGATGTCTAACAANATCTCGTTGTACACTGGAGAATGTGTTGTTGCTAAGACGAAACGAATGCCTGTACTTGTTATTCCTAGTTTGCGACCTCATGCATCGGCAGAAAAGTGTGATATGCAGCATGTTAAACGCTGTNNTGATAANAGTATACCATATTCGCAGTGACGTGGCTGCGTGTTGTAGACTGCTTCGGGTCGNATCTATCAGAGTTACTAGTCCGACGGGACGCCTGGAAGGAAGTCCTNGGNCGGGAACCCCGGTAGACGCGGTGGCAAAATANCGTTTCCAATTCCCGAATTCAATCGTATACACATTGCTCCGNGACAAACGGGGTTAGCCTGAGCCGACGCATTTCCAATAAACNCGTATTCATAACGGCTGNTGCCACTCTGGACAAGAACCCTTCNGGAGACAACTGGGTAATCNTGAANTNCACGGGGTTTTTGGNNTCTGGTGNNCTTNGTCTCCNNCANTGCAACAACACATNCCTCTCNCCAATNCGCCCACCANTTCCTTTGGGTTTNNCTCGNNACNACANTCAANTCGNCACTGTGCAAGCGACAGTGACAGCGCTCNCCAAANAGCAATGGGACAGGGAAACCCTGTGGGCAAAGTCAACAGCANTTTGGAACACCNTTCCCTTNACGAAGTTCCACTGTCNCNTGCCGGTNGGCGCNCNCGGTGGTCTCCANTCTGGTCNCAAGANCTCGCTAAGACCNNTCATCNCNGTGTGACACTTACGNGTCCCTNTCACNCAGACCTTGGCCGTGCGTNNTGCCTGGCCTGTGANACAATNGTGT]

[+] EMBL AL931890             [TGCCCGAGGTTANTCTAAGGCTACAGTTGAAAGAAGATGCGTACGAGCGCAAGCCGGGTCTGAATTTTGCTGAAAATTGTATTTCGAGTTGGCAGAAAACGAATCNCTCCCTACCAGAAGGATCATATANNTGAGANCACNTAGATACGATGATTGTAGCTGGTCACGATACGATTGNCACCTACGCATGTCGAACCATGCTTGGTAATGCTGGTGGATTGCATCCCGAGGTGCAGGAATATGGTGTGCCATGAGTAGGTGATGANCGTGTGTCCAGACAAATCGAAACCTGTAACAATTGGTAGATGTCTAACAANATCTCGTTGTACACTGGAGAATGTGTTGTTGCTAAGACGAAACGAATGCCTGTACTTGTTATTCCTAGTTTGCGACCTCATGCATCGGCAGAAAAGTGTGATATGCAGCATGTTAAACGCTGTNNTGATAANAGTATACCATATTCGCAGTGACGTGGCTGCGTGTTGTAGACTGCTTCGGGTCGNATCTATCAGAGTTACTAGTCCGACGGGACGCCTGGAAGGAAGTCCTNGGNCGGGAACCCCGGTAGACGCGGTGGCAAAATANCGTTTCCAATTCCCGAATTCAATCGTATACACATTGCTCCGNGACAAACGGGGTTAGCCTGAGCCGACGCATTTCCAATAAACNCGTATTCATAACGGCTGNTGCCACTCTGGACAAGAACCCTTCNGGAGACAACTGGGTAATCNTGAANTNCACGGGGTTTTTGGNNTCTGGTGNNCTTNGTCTCCNNCANTGCAACAACACATNCCTCTCNCCAATNCGCCCACCANTTCCTTTGGGTTTNNCTCGNNACNACANTCAANTCGNCACTGTGCAAGCGACAGTGACAGCGCTCNCCAAANAGCAATGGGACAGGGAAACCCTGTGGGCAAAGTCAACAGCANTTTGGAACACCNTTCCCTTNACGAAGTTCCACTGTCNCNTGCCGGTNGGCGCNCNCGGTGGTCTCCANTCTGGTCNCAAGANCTCGCTAAGACCNNTCATCNCNGTGTGACACTTACGNGTCCCTNTCACNCAGACCTTGGCCGTGCGTNNTGCCTGGCCTGTGANACAATNGTGT]


>consensus_7549#2 TGCCCGAGGTTANTCTAAGGCTACAGTTGAAAGAAGATGCGTACGAGCGCAAGCCGGGTC TGAATTTTGCTGAAAATTGTATTTCGAGTTGGCAGAAAACGAATCNCTCCCTACCAGAAG GATCATATANNTGAGANCACNTAGATACGATGATTGTAGCTGGTCACGATACGATTGNCA CCTACGCATGTCGAACCATGCTTGGTAATGCTGGTGGATTGCATCCCGAGGTGCAGGAAT ATGGTGTGCCATGAGTAGGTGATGANCGTGTGTCCAGACAAATCGAAACCTGTAACAATT GGTAGATGTCTAACAANATCTCGTTGTACACTGGAGAATGTGTTGTTGCTAAGACGAAAC GAATGCCTGTACTTGTTATTCCTAGTTTGCGACCTCATGCATCGGCAGAAAAGTGTGATA TGCAGCATGTTAAACGCTGTNNTGATAANAGTATACCATATTCGCAGTGACGTGGCTGCG TGTTGTAGACTGCTTCGGGTCGNATCTATCAGAGTTACTAGTCCGACGGGACGCCTGGAA GGAAGTCCTNGGNCGGGAACCCCGGTAGACGCGGTGGCAAAATANCGTTTCCAATTCCCG AATTCAATCGTATACACATTGCTCCGNGACAAACGGGGTTAGCCTGAGCCGACGCATTTC CAATAAACNCGTATTCATAACGGCTGNTGCCACTCTGGACAAGAACCCTTCNGGAGACAA CTGGGTAATCNTGAANTNCACGGGGTTTTTGGNNTCTGGTGNNCTTNGTCTCCNNCANTG CAACAACACATNCCTCTCNCCAATNCGCCCACCANTTCCTTTGGGTTTNNCTCGNNACNA CANTCAANTCGNCACTGTGCAAGCGACAGTGACAGCGCTCNCCAAANAGCAATGGGACAG GGAAACCCTGTGGGCAAAGTCAACAGCANTTTGGAACACCNTTCCCTTNACGAAGTTCCA CTGTCNCNTGCCGGTNGGCGCNCNCGGTGGTCTCCANTCTGGTCNCAAGANCTCGCTAAG ACCNNTCATCNCNGTGTGACACTTACGNGTCCCTNTCACNCAGACCTTGGCCGTGCGTNN TGCCTGGCCTGTGANACAATNGTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7549#0      CCGTATCTCTCTTATGGACATTGTAGAAGATATTCTACAGGTATTGGACCGATACGCACC 60
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      ------------------------------------------------------------
                                                                                  

consensus_7549#0      GCGATATAAATCCCCCATCGGAATATGGATGGGACCACAGCTGATTGTCGGTATCAAGGA 120
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      ------------------------------------------------------------
                                                                                  

consensus_7549#0      CAATCCTGACTATTTCCAAACGGTCATGAACTCACCGCACATGTTGAACAAAATGGATCA 180
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      ------------------------------------------------------------
                                                                                  

consensus_7549#0      GTACAACTTTTTCCGGATTGTCAATGGACTTTTCGCTGCGCCAGATCATACGTGGAAAAA 240
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      ------------------------------------------------------------
                                                                                  

consensus_7549#0      TGAACGCAAGCTGCTCAATCGCTCATTCAGCCCAACGATGCTGTCCAGCTTTGTGGATAT 300
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      ------------------------------------------------------------
                                                                                  

consensus_7549#0      TTTCAACGATAAAGACTTTATAATGGTCGAGAATCTGCGGAAATTCGTCGGAAATGGTGA 360
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      ------------------------------------------------------------
                                                                                  

consensus_7549#0      AGTTGATTTACATTTGTACATAGCCAAGTGTACCATCGATTCGATATTTGGAACGGCCTT 420
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      -----------------------------------------------------------A 1
                                                                                  

consensus_7549#0      TGGCAAGGATCTCAACACGCAAGGAAACGATGGCGCTGACGAGTACCTGCATTGTCTAGA 480
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      CNATCCTATAGGCCAGAATCGCCCCAGGGTTTATGCTGACTGAGTACTGCATTGTCTAGA 61
                                                                                  

consensus_7549#0      CACATTTTTTTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTAT 540
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      CACATTTTTCTCGCTAGTGTTTAAGCGCATTCTTCATCTGGAACGCTATTCGGAAAGTAT 121
                                                                                  

consensus_7549#0      CTAT-CGCCTTACGAAGGATTACGAGCTTG-AAACGAATTGTG----TAAACATCATCAG 594
consensus_7549#2      ------------------------------------------------------------
consensus_7549#1      CTATACGCCTTACGAAGGATTACGAGCTTGCAAACGAAACTTGGTGTTAAACACCATTCA 181
                                                                                  

consensus_7549#0      ------AAACATGTCGCTGGACCTTATGAAAGAGTTGAAAGAAAATTACAAAAACTCTAA 648
consensus_7549#2      ------------------------------------------TGCCCGAGGTTANTCTAA 18
consensus_7549#1      TCCAGCACAACCATTGTCTGCTTGTGACCCTTCATCAACAGCAGTTTGCACACAGCACAA 241
                                                                           *    **

consensus_7549#0      GGC-TACAGT-GAAAGA------AGATGCGTACGAGCGCAAGC-------------CGGC 687
consensus_7549#2      GGC-TACAGTTGAAAGA------AGATGCGTACGAGCGCAAGC-------------CGGG 58
consensus_7549#1      CACATTCACCACAANAACTCCTCAAAGGCTCACCAGTGCACACAGGCAAAGCATTGCGGT 301
                        * * **    **  *      * * **  ** ** ***  *             *** 

consensus_7549#0      TCTGAATTTTGCTGAAAATT----TATTT-GAGTTG---GCAGAAAAC-AATCCCTCCCT 738
consensus_7549#2      TCTGAATTTTGCTGAAAATTG---TATTTCGAGTTG---GCAGAAAACGAATCNCTCCCT 112
consensus_7549#1      TACGGAAACTGCCAAAGCCTGGGCTCCTTGAAATTTTATGGGGCANGCACACAGCCACAT 361
                      *  * *   ***  **   *    *  **  * **    *  * *  *  *   *  * *

consensus_7549#0      ACCAGAAG-ATCATATAAA--AGACCACATAGATACGATGATTGTAGCTGGTCACGATAC 795
consensus_7549#2      ACCAGAAGGATCATATANNTGAGANCACNTAGATACGATGATTGTAGCTGGTCACGATAC 172
consensus_7549#1      TTCTGGGTCACTGGACAGGTTCTGGAACCCAGGAAAGAAAACGAAATTTCGCCTTACCCC 421
                        * *    *    * *         **  **  * **  *    *  * * *      *

consensus_7549#0      GACTGCCACC-AC--CATGTCGAACC-TGCT-GCT-----------AATGCTGGCGA--T 837
consensus_7549#2      GATTGNCACCTACG-CATGTCGAACCATGCTTGGT-----------AATGCTGGTGGATT 220
consensus_7549#1      CCTTAAACCCAAAGTCACAAGGGATTCCACTCACTTNAACACAAGGAACCCCCACNAATT 481
                         *    ** *   **    * *     **   *           **  *        *

consensus_7549#0      GCATCCCGAGGTGCAGGAA-ATGGTGTACCAGGAG---GTGATGAGCGTGTGTCCAGACA 893
consensus_7549#2      GCATCCCGAGGTGCAGGAATATGGTGTGCCATGAGTAGGTGATGANCGTGTGTCCAGACA 280
consensus_7549#1      ACAGCACTTTAACCGGGAG-TTGGAATTTCCGGCTTACAGGCCGTTGGGGTCCTANANCA 540
                       ** * *      * ***   ***  *  *  *       *  *   * **       **

consensus_7549#0      A-ATCGAAACCTGTA-ACAAT---GGA---AGATGTC-AACAAT--CTCGT-GTACAC-G 940
consensus_7549#2      A-ATCGAAACCTGTA-ACAATT--GGT---AGATGTCTAACAANATCTCGTTGTACACTG 333
consensus_7549#1      GCATTTAAACGCGGACACACTTATGGTCCCAAANCCTCAACGCCCAATTGGTTTAAGCCN 600
                        **  ****  * * *** *   **    * *     ***      * *   **  *  

consensus_7549#0      GAGATGGTGTGCAAAG---AAACGATGCGTCTGTTTCCTGTTGGCCCTCTGATCGGCAGA 997
consensus_7549#2      GAGAATGTGT-TGTTG---CTAAGACGAAACGAATGCCTGTACTTGTTATTCCTAGTTTG 389
consensus_7549#1      AAAAACGCCCNTAGGGGATNTAGGGCGTTAACAATTTTGGCNTCTGGGGTGCCATACATG 660
                       * *  *        *     * *  *       *    *         *          

consensus_7549#0      AAG--TGTGTTGCAGATGTTAAGCTGGATGATAAACACACCATTCCGGCGGGCTGCTGTG 1055
consensus_7549#2      CGA--CCTCATGCATCGGCAGAAAAGTGTGATA--TGCAGCATGTTAA------ACGCTG 439
consensus_7549#1      TGGACCATTAAACCCCACCCGGGAACNAGACTATGGGCAACATGGGGACAAACCGTT-TG 719
                             *    *                  **    ** ***               **

consensus_7549#0      TAGCGCTCGGCATCTATCAGATACATCGAGA-------CCCGACGATCT-G--GGGACCC 1105
consensus_7549#2      TNNTGATAANAGTATACCATATTCGCAGTGA-------CGTGGCTGCGT-GTTGTAGACT 491
consensus_7549#1      GGGCGATTAGTGTNAAACAC-CCCACAGCGAAGCTGCGTACGGCNATNTAGGAACGACCC 778
                          * *     *  * **    *   * **          * *    * *       * 

consensus_7549#0      GAGCCGGGAAAGTTC----------AATCCCGATCACTTCCTGCCGGAAAGGGT---AGC 1152
consensus_7549#2      GCTTCGGGTCGNATC----------TATCAGAGTTACTA---GTCCGACGGGAC---GCC 535
consensus_7549#1      GACTGAGTTCAGTTCCCCANAGGTGAACGACAANAAATTACCGCNTGACANAANCACACC 838
                      *     *      **           *        * *    *   **           *

consensus_7549#0      TG-AGCGACATCCTTACGCGTATCTACCGTTCAGTGGAGGACCTCGGAACTGTATCGGTA 1211
consensus_7549#2      TGGAAGGAAGTCCTNGGNCGGGAACCCCGGTAGACGCGGTGGCAAAATANCGTTTCCAAT 595
consensus_7549#1      CTTCGTTCAACTATCACACCCCNNAACTAGTAGTGGCGGACACAAGGGAACATTTTGGTT 898
                                   *    *       *   *    *  *   *     *   * *     

consensus_7549#0      TCCGGTATGCTTGGCTGTCGATGAAAATTCTCATCGCACATCTGGTGCGAAACTATCGCT 1271
consensus_7549#2      TCCCGAAT--TCAATCGT--ATACACATTGCTCCGNGACAAACGGGGTTAGCCTG----- 646
consensus_7549#1      TCCCCAAAA-GCAGCAAGAANTAGACCGTAACCCACGGCACTTAGGTATATAACAC---- 953
                      ***   *              *  *   *         **    *    *          

consensus_7549#0      TCAAGACGACGC-TCAAGATGGAGGACTTGGAGATAAAGTTTGCAATCATTCTAAGAATC 1330
consensus_7549#2      ---AGCCGACGCATTTCCAATAAACNCGTATTCATAACGGCTGNTGCCACTCTGGA---C 700
consensus_7549#1      ---AANCAACAN----GGGAAAAAGANACAGATTTGGTGGG-GATATAGNTCTTGACGGC 1005
                         *  * **            *           *   *   *       ***      *

consensus_7549#0      ATGAACGGCTGTCTCGTGTCAATTGAAGATCGTAGCTGTAGTCCTGTTTAGTTAGGGTGC 1390
consensus_7549#2      AAGAAC--CCTTCNGGAGACAACTGGGTAATCN---TGAANTNCACGGGGTTTTTGGNNT 755
consensus_7549#1      AAACATCAAGGTAAAGANACAAACCCGTAGACA---TATGCCGACCNGNGTACACAACTN 1062
                      *   *      *   *   ***      *       *                       

consensus_7549#0      CTGAACCAGCTGTAGCAGCTGGCTCGA--TTAAATTGTGTCCAGGAGCATAATGTAATCT 1448
consensus_7549#2      CTGG--TGNNCTTNGTCTCCNNCANTG--CAACAACACATNCCTCTCNCCAATNCG-CCC 810
consensus_7549#1      TTGGCCNNACATCACCCCCCAATTAGGGATAAAAGNGGAGACCACACACCNTTANCGNCA 1122
                       **               *            * *       *          *     * 

consensus_7549#0      --GCCATACTTACTGGTTACAGCTACTGTGTAAACGCTAACTTCCGAACTAGATGATCTT 1506
consensus_7549#2      --ACCANTTCCTTTGGGTTTNNCT--CGNNACNACANTCAANTCGNCACTGTGCAAGCGA 866
consensus_7549#1      TAGACAACTTACCCGATGNGAGCACAAGTACATANCACCANCNGAACGTNGGGNTGGCAN 1182
                          **        *       *    *     *     *                 *  

consensus_7549#0      CTTGAGTTGATATCCTATATCGCTATAACCAGAAACGAACGGCTTGTGATCGCA--CAAT 1564
consensus_7549#2      CA-GTGACAGCGCTCNCCAA-ANAGCAATGGGACAGGGAAACCCTGTGGGCAAAGTCAAC 924
consensus_7549#1      AACNCG-CGGCACCCACGCA-GACACCTTTGGGTANTAACAACANG-GCCCATTAGGGGN 1239
                           *        *                *  *   *   *  * *  *         

consensus_7549#0      GGTGACAAAGCGTTAT-GAAATGGCTGATGAAAATGTAACTCAAAACGAAAAAAGGCGTT 1623
consensus_7549#2      AGCANTTTGGAAC-AC-CNTTCCCTTNACGAAGTTCCACTGTCNCNTGCCGGTNGGCGCN 982
consensus_7549#1      CACATTTTGGAACNATTCATACCNANAACANCGACAANNCAAAGNGCCCNACAAATCATA 1299
                               *    *            *                            *   

consensus_7549#0      TCTACTAC-ATAGGCACAGCAAACCCATCCTAATAATTTACACCTTGAAATAA--GTACA 1680
consensus_7549#2      CNCG-----GTGGTCTC--CANTCTGGTCNCAAGANCTCGC----TAAGACCN--NTCAT 1029
consensus_7549#1      TGCAACACCGCNGCGATCACAATCNCNACTNNNCACNTAATCGCACACCCTTACCGCAAC 1359
                                  *      **  *    *     *  *                      

consensus_7549#0      GATCGTAAGTTACATGCAATAAACCCTAAATTCGTTTGTAATACATACAAAAGTTCCAAG 1740
consensus_7549#2      CNCNGTGTGACACTTACGN--GTCCCTN---TCACNCAGACCTTGGCCGTGCGTNNTGCC 1084
consensus_7549#1      GTCAGTCCATTAATCANACCGNGTCNTAT-CTCCGGAGCACCACACCGAANTCCCGCGCN 1418
                          **     *            * *    **      *                    

consensus_7549#0      TGTGCAATAAACCATTCGTAGTGTGGTT-------------------------------- 1768
consensus_7549#2      TGGCCTGTGANACAATNGTGT--------------------------------------- 1105
consensus_7549#1      NAACTGGCCAANCAGGACGANNATAAACGCAGCCGTATCCACTGNAGACAGCCAAAACAC 1478
                               *  **                                              

consensus_7549#0      ----
consensus_7549#2      ----
consensus_7549#1      CACA 1482
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)