Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7552 cluster # 7552       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7552#0 length = 1636 sequences # 4  
consensus_7552#1 length = 965 sequences # 2  
consensus_7552#2 length = 906 sequences # 1  

consensusID : consensus_7552#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1636
fasta sequence
                              [CCGCACTACTACACCACACGGTTTGTGTATCTCAGAAGAAGAAAAAAATAAAAAACATCCCCATCCTTACATTTCAGTGGGATGGAGATGAGTTTTGGAACGTGTATAGGGGGGAGTGAGCAACTGGGAACAGGTTACTCGGTAAAGATGGCTATGAGGGCATGACATGGCCCCAGCAAGGGTGTCAAGATATCGTTAGTAATCCTCCCAGCACATTGCTAACGTTGGGAGAAGGGTAAGGGCAGACGAAAAATATGTGTACGGTGGTGTACGGTGTTTGCTGCTACTAAACACAGTATACTACCCATTTAAACTTATGGCCAAATCAAACTCTCACCCACTAATCGCGCCATCGACACACAAGAACACACGCTAGTACCACACACACCCAAACACACTTACAGTATATATTGAGGCGCACGTATACTGAAATGCATCCAACACACACACACGTATATATACACACACTGCCGGCAAGCAAAGTGACAGAAAACAAAACTGAGTGTATAGAAGAAGAGGAAGAAAAAAAGGAGGACAAAGCAAGCATCCACTCAAACAGACAATACTACATATTATATTTGTGTTCTTAATTTCGAAGTTTTGTGATTGTTGCGATTGACGGGGGGCCCGCAAAAAAGAAACTAGTTTAAAAGAATACACTGTGACGAATATAGAACAAATGCATCAAAAGGGAGGGCGGCGGAGGGAACGAGCGACGATGCTTTAAGCTAAGTGAAAATGGACCTGATGGGTGAAAATTAAAGACACAGAAAGGGAAATGGAGACACGTGACAGACCCAGTGACGCTGTCAGGGGAGCAAAACACAGAAACTGCATGTATATTTCCATTATAGTGTGCTATTGCTGTTGCTGAGTAGTAGTGTATATTTAATACGAAACTATTATACTACATACACACGGGCACGCTTGTGTGGTGTGTGTGTGGAAATAGCTACAAAAGACAAAAACAAATAAATGATCTCTTCCGTGTAGCGCTGCATGCGAAGCAGAAAAAGGGCGATGTAAAGAAATAGAAAGATAGAGGGAGAGAGTGTGAGTAATTGCGAGAATTCAAAGCAAAAAGAGCAAGAAGAAAAAACATAAATAGCAACAAAAATATAAGAAAAATACATGAAGTGAGCTAACAAAAAACCAAGAGAAAACGGAAAAGCAATAACGTTAGTTATTATTAAACAATATGATAATGATTAAAAATTATAATTATGATACTTATGATGATTATTATTACCAATTATTGTCGATCATGTGATGTACTGTTCCTCCCCCC---TCCCCATTCACTA-AAC----AAAAAGTAGCTACGCCGCCATTCTTCGTCATCGTGTGTCGCCACATCGCGCGATCATTCCACATCTGTGTTTCAGGAATATGGGGGGAGAAGGGGGAGGGAGGAAAAAGGACGAAATAGTAGCGAATAAGGGGGGATTGTAACCCCAACGATTGACGAAGGCAAAAGAAAGTAAGCAAAAAGGGTAACTCCGCGAATCCGGAAACCCTGAACCTACAGGCAAATCCTTGTGCTAAAGCGTACCAACTACTACTATCACCCAACCACCCACAACCCTTGACCTTATACCGCAACACAGCAACACAAAAACCACCAGTTGTGATTGCAAAACGT]

[+] EMBL BM618823             [CCGCACTACTACACCACACGGTTTGTGTATCTCAGAAGAAGAAAAAAATAAAAAACATCCCCATCCTTACATTTCAGTGGGATGGAGATGAGTTTTGGAACGTGTATAGGGGGGAGTGAGCAACTGGGAACAGGTTACTCGGTAAAGATGGCTATGAGGGCATGACATGGCCCCAGCAAGGGTGTCAAGATATCGTTAGTAATCCTCCCAGCACATTGCTAACGTTGGGAGAAGGGTAAGGGCAGACGAAAAATATGTGTACGGTGGTGTACGGTGTTTGCTGCTACTAAACACAGTATACTACCCATTTAAACTTATGGCCAAATCAAACTCTCACCCACTAATCGCGCCATCGACACACAAGAACACACGCTAGTACCACACACACCCAAACACACTTACAGTATATATTGAGGCGCACGTATACTGAAATGCATCCAACACACACACACGTATATATACACACACTGCCGGCAAGCAAAGTGACAGAAAACAAAACTGAGTGTATAGAAGAAGAGGAAGAAAAAAAGGAGGACAAAGCAAGCATCCACTCAAACAGACAATACTACATATTATATTTGTGTTCTTAATTTCGAAGTTTTGTGATTGTTGCGATTGACGGGGGGCCCGCAAAAAAGAAACTAGTTTAAAAGAATACACTGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX613409             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTGTATAGAAGAAGAGTAAGAAAAAAAGGAGGACAAAGCAAGCATCCACTCAAACAGACAATACTACATATTATATTTGTGTT TTAATTTCGAAGTTTTGTGATTGTTGCGATTGACGGGGGGCCCGCAAAAAAGAAACTAGTTTAAAAGAATACACTGTGACGAATATAGAACAAATGCATCAAAAGGGAGGGCGGCGGAGGGAACGAGCGACGATGCTTTAAGCTAAGTGAAAATGGACCTGATGGGTGAAAATTAAAGACACAGAAAGGGAAATGGAGACACGTGACAGACCCAGTGACGCTGTCAGGGGAGCAAAACACAGAAACTGCATGTATATTTCCATTATAGTGTGCTATTGCTGTTGCTGAGTAGTAGTGTATATTTAATACGAAACTATTATACTACATACACACGGGCACGCTTGTGTGGTGTGTGTGTGGAAATAGCTACAAAAGACAAAAACAAATAAATGATCTCTTCCGTGTAGCGCTGCATGCGAAGCAGAAAAAGGGCGATGTAAAGAAATAGAAAGATAGAGGGAGAGAGTGTGAGTAATTGCGAGAATTCAAAGCAAAAAGAGCAAGAAGAAAAAACATAAATAGCAACAAAAATATAAGAAAAATACATGAAGTGAGCTAACAAAAAACCAAGAGAAAACGGAAAAGCAATAACGTTAGTTATTATTAAACAATATGATAATGATTAAAAATTATAATTATGATACTTATGATGATTATTATTACCAATTATTGTCGATCATGTGATGTACTGTTCCTCCCCCC   TCCCCAT                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM627089             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACATAAATAGCAACAAAAATATAAGAAAAATACATGAAGTGAGCTAACAAAAAACCAAGAGAAAACGGAAAAGCAATAACGTTAGTTATTATTAAACAATATGATAATGATTAAAAATTATAATTATGATACTTATGATGATTATTATTACCAATTATTGTCGATCATGTGATGTACTGTTCCTCCCCCCCATTCCCCATTCACTA AAC    AAAAAGTAGCTACGCCGCCATTCTTCGTCATCGTGTGTCGCCACATCGCGCGATCATTCCACATCTGTGTTTCAGGAATATGGGGGGAGAAGGGGGAGGGAGGAAAAAGGACGAAATAGTAGCGAATAAGGGGGGATTGTAACCCCAACGATTGACGAAGGCAAAAGAAAGTAAGCAAAAAGGGTAACTCCGCGAATCCGGAAACCCTGAACCTACAGGCAAATCCTTGTGCTAAAGCGTACCAACTACTACTATCACCCAACCACCCACAACCCTTGACCTTATACCGCAACACAGCAACACAAAAACCACCAGTTGTGATTGCAAAACGT]
[+] EMBL BX615685             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAAGAGAAAACGGAAAAGCAATAACGTTAGTTATTATTAAACAATATGATAATGATTAAAAATTATAATTATGATACTTATGATGATTATTATTACCAATTATTGTCGATCATGTGATGTACTGTTCCTCCCCCC   TCCCCATTCACTACAACAAAAAAAAAATAGCTACGCCGCCATTCTTCGTCATCGTGTGTCGCCACATCGCGCGATCATTCCACATCTGTGTTTCAAGAATA                                                                                                                                                                                                                                                            ]


>consensus_7552#0 CCGCACTACTACACCACACGGTTTGTGTATCTCAGAAGAAGAAAAAAATAAAAAACATCC CCATCCTTACATTTCAGTGGGATGGAGATGAGTTTTGGAACGTGTATAGGGGGGAGTGAG CAACTGGGAACAGGTTACTCGGTAAAGATGGCTATGAGGGCATGACATGGCCCCAGCAAG GGTGTCAAGATATCGTTAGTAATCCTCCCAGCACATTGCTAACGTTGGGAGAAGGGTAAG GGCAGACGAAAAATATGTGTACGGTGGTGTACGGTGTTTGCTGCTACTAAACACAGTATA CTACCCATTTAAACTTATGGCCAAATCAAACTCTCACCCACTAATCGCGCCATCGACACA CAAGAACACACGCTAGTACCACACACACCCAAACACACTTACAGTATATATTGAGGCGCA CGTATACTGAAATGCATCCAACACACACACACGTATATATACACACACTGCCGGCAAGCA AAGTGACAGAAAACAAAACTGAGTGTATAGAAGAAGAGGAAGAAAAAAAGGAGGACAAAG CAAGCATCCACTCAAACAGACAATACTACATATTATATTTGTGTTCTTAATTTCGAAGTT TTGTGATTGTTGCGATTGACGGGGGGCCCGCAAAAAAGAAACTAGTTTAAAAGAATACAC TGTGACGAATATAGAACAAATGCATCAAAAGGGAGGGCGGCGGAGGGAACGAGCGACGAT GCTTTAAGCTAAGTGAAAATGGACCTGATGGGTGAAAATTAAAGACACAGAAAGGGAAAT GGAGACACGTGACAGACCCAGTGACGCTGTCAGGGGAGCAAAACACAGAAACTGCATGTA TATTTCCATTATAGTGTGCTATTGCTGTTGCTGAGTAGTAGTGTATATTTAATACGAAAC TATTATACTACATACACACGGGCACGCTTGTGTGGTGTGTGTGTGGAAATAGCTACAAAA GACAAAAACAAATAAATGATCTCTTCCGTGTAGCGCTGCATGCGAAGCAGAAAAAGGGCG ATGTAAAGAAATAGAAAGATAGAGGGAGAGAGTGTGAGTAATTGCGAGAATTCAAAGCAA AAAGAGCAAGAAGAAAAAACATAAATAGCAACAAAAATATAAGAAAAATACATGAAGTGA GCTAACAAAAAACCAAGAGAAAACGGAAAAGCAATAACGTTAGTTATTATTAAACAATAT GATAATGATTAAAAATTATAATTATGATACTTATGATGATTATTATTACCAATTATTGTC GATCATGTGATGTACTGTTCCTCCCCCCTCCCCATTCACTAAACAAAAAGTAGCTACGCC GCCATTCTTCGTCATCGTGTGTCGCCACATCGCGCGATCATTCCACATCTGTGTTTCAGG AATATGGGGGGAGAAGGGGGAGGGAGGAAAAAGGACGAAATAGTAGCGAATAAGGGGGGA TTGTAACCCCAACGATTGACGAAGGCAAAAGAAAGTAAGCAAAAAGGGTAACTCCGCGAA TCCGGAAACCCTGAACCTACAGGCAAATCCTTGTGCTAAAGCGTACCAACTACTACTATC ACCCAACCACCCACAACCCTTGACCTTATACCGCAACACAGCAACACAAAAACCACCAGT TGTGATTGCAAAACGT



consensusID : consensus_7552#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 965
fasta sequence
                              [CCGGGGATGGGCGGCTTTCTTCACCTGTCGTTGTGGATAGTTCCCCCCGACACTCTCCCACAAGTTTACCTTGATACTTATTAGAATACGAGAGACTCATGGATAGCCAGATTTAAGCATGTTAAGAAAGAATAAAAGACAACAAGACGCTTTCAAACCATACATATATGACTATATATAGATATACACACACACAAACACACACGCGCGCGCGCGTACAAAAAATACACACACTCACATACATTAGTATTTATATTTTTAGGGATTTATACTTAGGATCTGTGAATTTTATGGGAACTACACTCTAAATCTAAATCTAAATGTGTCGCGTGCGAAAGGACACCCGAAGGTGCTCAACCGTTGGGGCGCGCGGCGTGTGTAAGGCAAATGTATTCATAAAAGCAATCAATCGATGGAACAGTAGT---GGTGGTGTGGTGTCGTCGCAG-TACGTCGTATCTTGAAAGCTCTATACTTAATGGTTAGGATACTTAAACATTTTGTCGACCCGCTTGAGGACCTTGTCGAAAAAGGGCGTTGTGTTCGGCATGGGAGGAGCTCGTGTCCCGGTCGTGTGTTAAGAAATATACAAAAGCAATATATCATATACGCTACACACTACTACACC-ACATGG-TTTGTGTATCTCAGAAGAAGAAAAAAATAAAGAGAACATCCCCATCCTTACATTTCAGTGGGATGGAGATGAGCGTTGTTGGAACGTGTATAGGGGGGAGTGAGCAACTGGGAACAGGTTACTCGGTACAAGATGGCTATGAGCGGCATGCACATGGCCCCAGCAAGGGTGTCAAGATATCGTTAGTCAATCCTCCCAGACACATTGCTAACGTTCGCNAGAACCGGTAAGGGCACGACGCAACNACATATCGTGATACGCNCTCGCGTNGTACCGNGTGTCTCTGCATNCTACTAAAACACACGNTATACTACCCATTTCANACTTACTCGGC]

[+] EMBL BM608060             [CCGGGGATGGGCGGCTTTCTTCACCTGTCGTTGTGGATAGTTCCCCCCGACACTCTCCCACAAGTTTACCTTGATACTTATTAGAATACGAGAGACTCATGGATAGCCAGATTTAAGCATGTTAAGAAAGAATAAAAGACAACAAGACGCTTTCAAACCATACATATATGACTATATATAGATATACACACACACAAACACACACGCGCGCGCGCGTACAAAAAATACACACACTCACATACATTAGTATTTATATTTTTAGGGATTTATACTTAGGATCTGTGAATTTTATGGGAACTACACTCTAAATCTAAATCTAAATGTGTCGCGTGCGAAAGGACACCCGAAGGTGCTCAACCGTTGGGGCGCGCGGCGTGTGTAAGGCAAATGTATTCATAAAAGCAATCAATCGATGGAACAGTAGT   GGTGGTGTGGTGTCGTCGCAG TACGTCGTATCTTGAAAGCTCTATACTTAATGGTTAGGATACTTAAACATTTTGTCGACCCGCTTGAGGACCTTGTCGAAAAAGGGCGTTGTGTTCGGCATGGGAGGAGCTCGTGTCCCGGTCGTGTGTTAAGAAATATACAAAAGCAATATATCATATACGCTACACACTACTACACC ACATGG TTTGTGTATCTCAGAAG                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX466371             [                                                                                                                                                                                                                                                                                                                                                                                                                   caagAATCG  GCACCNGGAGTNTAGGTGGTGTGGTGTCGTCGCAGCTACGTCGTATCTTGAAAGCTCTATACTTAATGGTTAGGATACTTAAACATTTTGTCGACCCGCTTGAGGACCTTGTCGAAAAAGGGCGTTGTGTTCGGCATGGGAGGAGCTCGTGTCCCGGTCGTGTGTTAAGAAATATACAAAAGCAATATATCATATACGCTACACACTACTACACCGACACGGTTTTGTGTATCTCAGAAGAAGAAAAAAATAAAGAGAACATCCCCATCCTTACATTTCAGTGGGATGGAGATGAGCGTTGTTGGAACGTGTATAGGGGGGAGTGAGCAACTGGGAACAGGTTACTCGGTACAAGATGGCTATGAGCGGCATGCACATGGCCCCAGCAAGGGTGTCAAGATATCGTTAGTCAATCCTCCCAGACACATTGCTAACGTTCGCNAGAACCGGTAAGGGCACGACGCAACNACATATCGTGATACGCNCTCGCGTNGTACCGNGTGTCTCTGCATNCTACTAAAACACACGNTATACTACCCATTTCANACTTACTCGGC]


>consensus_7552#1 CCGGGGATGGGCGGCTTTCTTCACCTGTCGTTGTGGATAGTTCCCCCCGACACTCTCCCA CAAGTTTACCTTGATACTTATTAGAATACGAGAGACTCATGGATAGCCAGATTTAAGCAT GTTAAGAAAGAATAAAAGACAACAAGACGCTTTCAAACCATACATATATGACTATATATA GATATACACACACACAAACACACACGCGCGCGCGCGTACAAAAAATACACACACTCACAT ACATTAGTATTTATATTTTTAGGGATTTATACTTAGGATCTGTGAATTTTATGGGAACTA CACTCTAAATCTAAATCTAAATGTGTCGCGTGCGAAAGGACACCCGAAGGTGCTCAACCG TTGGGGCGCGCGGCGTGTGTAAGGCAAATGTATTCATAAAAGCAATCAATCGATGGAACA GTAGTGGTGGTGTGGTGTCGTCGCAGTACGTCGTATCTTGAAAGCTCTATACTTAATGGT TAGGATACTTAAACATTTTGTCGACCCGCTTGAGGACCTTGTCGAAAAAGGGCGTTGTGT TCGGCATGGGAGGAGCTCGTGTCCCGGTCGTGTGTTAAGAAATATACAAAAGCAATATAT CATATACGCTACACACTACTACACCACATGGTTTGTGTATCTCAGAAGAAGAAAAAAATA AAGAGAACATCCCCATCCTTACATTTCAGTGGGATGGAGATGAGCGTTGTTGGAACGTGT ATAGGGGGGAGTGAGCAACTGGGAACAGGTTACTCGGTACAAGATGGCTATGAGCGGCAT GCACATGGCCCCAGCAAGGGTGTCAAGATATCGTTAGTCAATCCTCCCAGACACATTGCT AACGTTCGCNAGAACCGGTAAGGGCACGACGCAACNACATATCGTGATACGCNCTCGCGT NGTACCGNGTGTCTCTGCATNCTACTAAAACACACGNTATACTACCCATTTCANACTTAC TCGGC



consensusID : consensus_7552#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 906
fasta sequence
                              [CAGATCCCCGAGGTTATGATGTTGGAGCTGGCGCAACATGCTGTNNTAATNTCNAAGTTTTGTGATTGTANGCGATTGACGGGGGGCCCGCCCGACAAAAAAGAAACTAGTTTACACAGAATACACTGTGACGAATATAGAACAAATGCATCANAAAGGAAGTGGCGGCGGAGTGAAACGAGCGACGATGCTCTTACACGTCTNACGTGAAACATGGACCTGATGTGGTGAACAATTANAGACCACAGAAAGGGAACGGGAGACACGTGACAGACACAGTGACGCTGTCAGGGGAGCACAAACACAGAAACCTGGATGTATATTCCATATATAGTTGTGCTATTGCTGTCNGCTGAGTAGTAGTGTACTATTCNAAATACGAAACTAATTATACTACCATACACACGGGACACGCTTGTGTGGTGTGTGTGGAAAGAGCTACCNANAACGACCAAACAACCAACACTNAGCCTGACTCTCTTACCGGTGCTACGCGCTGCACTGCGACACGCAGAAAACAGGGCGACTGTCACACGAAACTAGACNCGACGCGGGNGNGNCGCGACCGTGACGTAACTTTGCGAGACCTTACTCNCCACGCCCTCACACAGCCCAACAACAAAGCACNACACNCAACCGNCCCACCACCCACCNATNACAATACGCCAAAGCCACANCANCACNTCATTACANGCACANNACAACCTCACCACTTGAACNCGCTGCCAGCCCTACANCCCCCACCCCCNCCCCCNCNGCAGGCNATCACCAACGGNCACGACTGCNANCTACACGGTTCCAGCTGCNTCCATTCCGCAGCCCNNATNACTGCCCTACNTTGNCTTCNCCACCCGTCTCATACAGTCTCCCTGCNNNTACCCTCCACTTGCATGAGTTCNCTCANAC]

[+] EMBL AL932152             [CAGATCCCCGAGGTTATGATGTTGGAGCTGGCGCAACATGCTGTNNTAATNTCNAAGTTTTGTGATTGTANGCGATTGACGGGGGGCCCGCCCGACAAAAAAGAAACTAGTTTACACAGAATACACTGTGACGAATATAGAACAAATGCATCANAAAGGAAGTGGCGGCGGAGTGAAACGAGCGACGATGCTCTTACACGTCTNACGTGAAACATGGACCTGATGTGGTGAACAATTANAGACCACAGAAAGGGAACGGGAGACACGTGACAGACACAGTGACGCTGTCAGGGGAGCACAAACACAGAAACCTGGATGTATATTCCATATATAGTTGTGCTATTGCTGTCNGCTGAGTAGTAGTGTACTATTCNAAATACGAAACTAATTATACTACCATACACACGGGACACGCTTGTGTGGTGTGTGTGGAAAGAGCTACCNANAACGACCAAACAACCAACACTNAGCCTGACTCTCTTACCGGTGCTACGCGCTGCACTGCGACACGCAGAAAACAGGGCGACTGTCACACGAAACTAGACNCGACGCGGGNGNGNCGCGACCGTGACGTAACTTTGCGAGACCTTACTCNCCACGCCCTCACACAGCCCAACAACAAAGCACNACACNCAACCGNCCCACCACCCACCNATNACAATACGCCAAAGCCACANCANCACNTCATTACANGCACANNACAACCTCACCACTTGAACNCGCTGCCAGCCCTACANCCCCCACCCCCNCCCCCNCNGCAGGCNATCACCAACGGNCACGACTGCNANCTACACGGTTCCAGCTGCNTCCATTCCGCAGCCCNNATNACTGCCCTACNTTGNCTTCNCCACCCGTCTCATACAGTCTCCCTGCNNNTACCCTCCACTTGCATGAGTTCNCTCANAC]


>consensus_7552#2 CAGATCCCCGAGGTTATGATGTTGGAGCTGGCGCAACATGCTGTNNTAATNTCNAAGTTT TGTGATTGTANGCGATTGACGGGGGGCCCGCCCGACAAAAAAGAAACTAGTTTACACAGA ATACACTGTGACGAATATAGAACAAATGCATCANAAAGGAAGTGGCGGCGGAGTGAAACG AGCGACGATGCTCTTACACGTCTNACGTGAAACATGGACCTGATGTGGTGAACAATTANA GACCACAGAAAGGGAACGGGAGACACGTGACAGACACAGTGACGCTGTCAGGGGAGCACA AACACAGAAACCTGGATGTATATTCCATATATAGTTGTGCTATTGCTGTCNGCTGAGTAG TAGTGTACTATTCNAAATACGAAACTAATTATACTACCATACACACGGGACACGCTTGTG TGGTGTGTGTGGAAAGAGCTACCNANAACGACCAAACAACCAACACTNAGCCTGACTCTC TTACCGGTGCTACGCGCTGCACTGCGACACGCAGAAAACAGGGCGACTGTCACACGAAAC TAGACNCGACGCGGGNGNGNCGCGACCGTGACGTAACTTTGCGAGACCTTACTCNCCACG CCCTCACACAGCCCAACAACAAAGCACNACACNCAACCGNCCCACCACCCACCNATNACA ATACGCCAAAGCCACANCANCACNTCATTACANGCACANNACAACCTCACCACTTGAACN CGCTGCCAGCCCTACANCCCCCACCCCCNCCCCCNCNGCAGGCNATCACCAACGGNCACG ACTGCNANCTACACGGTTCCAGCTGCNTCCATTCCGCAGCCCNNATNACTGCCCTACNTT GNCTTCNCCACCCGTCTCATACAGTCTCCCTGCNNNTACCCTCCACTTGCATGAGTTCNC TCANAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7552#0      CCGCACTACTACACCACACGGTTTGTGTATCTCAGAAGAAGAAAAAAATAAAAAACATCC 60
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      CCATCCTTACATTTCAGTGGGATGGAGATGAGTTTTGGAACGTGTATAGGGGGGAGTGAG 120
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      CAACTGGGAACAGGTTACTCGGTAAAGATGGCTATGAGGGCATGACATGGCCCCAGCAAG 180
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      GGTGTCAAGATATCGTTAGTAATCCTCCCAGCACATTGCTAACGTTGGGAGAAGGGTAAG 240
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      GGCAGACGAAAAATATGTGTACGGTGGTGTACGGTGTTTGCTGCTACTAAACACAGTATA 300
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      CTACCCATTTAAACTTATGGCCAAATCAAACTCTCACCCACTAATCGCGCCATCGACACA 360
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ---------------------------------------------CCGGGGATGGGCGGC 15
                                                                                  

consensus_7552#0      CAAGAACACACGCTAGTACCACACACACCCAAACACACTTACAGTATATATTGAGGCGCA 420
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      TTTCTTCACCTGTCGTTGTGGATAGTTCCCCCCGACACTCTCC-CACAAGTTTACCTTGA 74
                                                                                  

consensus_7552#0      CGTATACTGAAATGCATCCAACACACACACACGTATATATACACACACTGCCGGCAAGCA 480
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      TACTTATTAGAATACGAGAGACTCATGGATAGCCAGATTTAAGCATGTTAAGAAAGAATA 134
                                                                                  

consensus_7552#0      AAGTGACAGAAAACAAAACTGAGTGTATAGAAGAAGAGGAAGAAAAAAAGGAGGACAAAG 540
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      AAAGACAACAAGACGCTTTCAAAC---CATACATATATGACTATATATAGATATACACA- 190
                                                                                  

consensus_7552#0      CAAGCATCCACTCAAACAGACAATACTACATATTAT---ATTTGTGTTCTTAATTTCGAA 597
consensus_7552#2      ----CAGATCCCCGAGGTTATGATGTTGGAGCTGGCGCAACATGCTGTNNTAATNTCNAA 56
consensus_7552#1      CACACAAACACACACGCGCGCGCGCGTACAAAAAAT---ACACACACTCACATACATTAG 247
                          **    * *             *  *         *       *   *      * 

consensus_7552#0      GTTTTGTGATTGT-TGCGATTG-ACGGGGGGCCCGC-----AAAAAAGAAACTAGTTTAA 650
consensus_7552#2      GTTTTGTGATTGTANGCGATTG-ACGGGGGGCCCGCCCGACAAAAAAGAAACTAGTTTAC 115
consensus_7552#1      TATTTATATTTTTAGGGATTTATACTTAGGATCTGT------------GAATT---TTAT 292
                        *** *  ** *  *   **  **   **  * *              ** *   *** 

consensus_7552#0      A-AGAATACACTGTGACGAATATAGAAC-AAATGCATCAAAAGGGAGG--GCGGCGGAG- 705
consensus_7552#2      ACAGAATACACTGTGACGAATATAGAAC-AAATGCATCANAAAGGAAGTGGCGGCGGAGT 174
consensus_7552#1      GGGAACTACACTCT---AAATCTAAATCTAAATGTGTCGCGTGCGAAAGGACACCCGAAG 349
                          * ****** *    *** ** * * *****  **      **     *  * **  

consensus_7552#0      G-GAACGAGCGACGATGCTTTAAG-----CTAAGTGAAA-ATGGACCTGATG-GGTGAA- 756
consensus_7552#2      G-AAACGAGCGACGATGCTCTTACACGTCTNACGTGAAACATGGACCTGATGTGGTGAAC 233
consensus_7552#1      GTGCTCAACCGTTGGGGCGCGCGGCGTGTGTAAGGCAAATGTATTCATAAAA--GCAATC 407
                      *    * * **  *  **             * *  ***  *   * * *    *  *  

consensus_7552#0      AATTAAAGAC-ACAGAAAGGGAAATGGAGACACGTGACAGACCCAGTGACGCTGTCAGGG 815
consensus_7552#2      AATTANAGACCACAGAAAGGGAACGGGAGACACGTGACAGACACAGTGACGCTGTCAGGG 293
consensus_7552#1      AATCGATGGA-ACAGTAGTGGTGGTGTGGTGTCGTCGCAGT----ACGTCG-TATCTTGA 461
                      ***    *   **** *  **    *  *   ***  ***       * ** * **  * 

consensus_7552#0      GAGCA--AAACACAGAAAC-TGCATGTATATTTCCATTATAGT-GTGCTATTGCTGT-TG 870
consensus_7552#2      GAGCAC-AAACACAGAAACCTGGATGTATATTCCATATATAGTTGTGCTATTGCTGTCNG 352
consensus_7552#1      AAGCTCTATACTTAATGGTTAGGATACTTAAACATTTTGTCGACCCGCTTGAGGACCTTG 521
                       ***   * **  *       * **   **       * * *    ***   *      *

consensus_7552#0      CTGAGTAGTAGTGTA-TATTTAA--TACGAAACTA-TTATACTAC-ATACACACGGG-CA 924
consensus_7552#2      CTGAGTAGTAGTGTACTATTCNAAATACGAAACTAATTATACTACCATACACACGGGACA 412
consensus_7552#1      TCGAAAAAGGGCGTTGTGTTCGG--CATGGGAGGA---------------GCTCGTGTCC 564
                        **  *   * **  * **      * *  *  *                * ** * * 

consensus_7552#0      CGCTTGTGTGGTGTGTGTGTGGAAATAGCTACAAAAGACAA--AAACAAATAAA--TGA- 979
consensus_7552#2      CGCTTGTGTGGTGTGTGTG--GAAAGAGCTACCNANAACGACCAAACAACCAACACTNAG 470
consensus_7552#1      CGGTCGTGTGTTA-------AGAAATA--TACAAAAG-CAATATATCATATACGCTACAC 614
                      ** * ***** *         **** *  ***  *   * *   * **   *      * 

consensus_7552#0      ------TCTCTTCCGTGTA----GCGCTGCA-TGCGAAGCAGAAAAAGGGCGATGTAAAG 1028
consensus_7552#2      CCTGACTCTCTTACCGGTGCTACGCGCTGCACTGCGACACGCAGAAAACAGGGCG-ACTG 529
consensus_7552#1      ACT---ACTACACCACATGG---TTTGTGTATCTCAGAAGAAGAAAAAAATAAAGAGAAC 668
                             **    *   *         ** *   *         ***       *     

consensus_7552#0      AAATAGAAAGATAGAGGGAGAGAGTGTGAGTAATTGCGAGAATTCAAAGCAAAAAGAGCA 1088
consensus_7552#2      TCACACGAAACTAGACNCGACGCGGGNGNGNCGCGACCGTGACGTAACTTTGCGAGACCT 589
consensus_7552#1      ATCCCCATCCTTACATTTCAGTGGGATGGAGATGAGCGTTGTTGGAACGTGTATAGGGGG 728
                                 ** *        *   *        *        **       **    

consensus_7552#0      AGAAGAAAAAACATAAATAGCAACAAAAATATAAGAAAAATACATGAAGTGAGCTAACAA 1148
consensus_7552#2      TACTCNCCACGCCCTCACACAGCCCAACAACAAAGCACNACACNC-AACCGNCCCACCAC 648
consensus_7552#1      GAGTGAGCAACTGGGAACAGGTTACTCGGTACAAGATGGCTATG---AGCGGCATGCACA 785
                              *       * *             ***      *     *  *         

consensus_7552#0      AAAACCAAGAGAAAACGGAAAAGCAATAACGTTA-GTTATTATTAA-ACAATATGA--TA 1204
consensus_7552#2      CCACCNATNACAATACGCCAAAGCCACANCANCACNTCATTACANGCACANNACAACCTC 708
consensus_7552#1      TGGCCCCAGCAAGGGTGTCAAGATATCGTTAGTCAATCCTCCCAGACACATTGCTAA-CG 844
                          *      *    *  **               *  *       ***     *    

consensus_7552#0      ATGATTAAAAATTATAATTA---TGATACTTATGATGATTATTATTACCAATTATTGT-C 1260
consensus_7552#2      ACCACTTGAACNCGCTGCCAGCCCTACANCCCCCACCCCCNCCCCCNCNGCAGGCNAT-C 767
consensus_7552#1      TTCGCNAGAACCGGTAAGGG----------CACGACG----CAACNACATATCGTGATAC 890
                              **                        *            *         * *

consensus_7552#0      GATCATGTGATGTACTGTTCCTCCCCCCTCCCCATTCAC-TAAACAAAAAGTAGCT-ACG 1318
consensus_7552#2      ACCAACGGNCACGACTGCNANCTACACGGTTCCAGCTGC-NTC-CATTCCGCAGCCCNNA 825
consensus_7552#1      GCNCTCGCGTNGTACCGNGTGTCTCTGCATNCTACTAAAACACACGNTATACTACCCATT 950
                            *      ** *       *      * *          *         *     

consensus_7552#0      CCGCCATTCTTCGTCATCGTGTGTCGCCACATCGCGCGATCATTCCACATCTGTGTTTCA 1378
consensus_7552#2      TNACTGCCCTACNTTGNCTTCNCCACCCGTCTCATACAGTCTCCCTGCNNNTACCCTCCA 885
consensus_7552#1      TCANACTTACTCGGC--------------------------------------------- 965
                                 *                                                

consensus_7552#0      GGAATATGGGGGGAGAAGGGGGAGGGAGGAAAAAGGACGAAATAGTAGCGAATAAGGGGG 1438
consensus_7552#2      CTTGCATGAGTTCNCTCANAC--------------------------------------- 906
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      GATTGTAACCCCAACGATTGACGAAGGCAAAAGAAAGTAAGCAAAAAGGGTAACTCCGCG 1498
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      AATCCGGAAACCCTGAACCTACAGGCAAATCCTTGTGCTAAAGCGTACCAACTACTACTA 1558
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      TCACCCAACCACCCACAACCCTTGACCTTATACCGCAACACAGCAACACAAAAACCACCA 1618
consensus_7552#2      ------------------------------------------------------------
consensus_7552#1      ------------------------------------------------------------
                                                                                  

consensus_7552#0      GTTGTGATTGCAAAACGT 1636
consensus_7552#2      ------------------
consensus_7552#1      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)