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Anopheles gambiae
cluster # 7569 cluster # 7569       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7569#0 length = 1346 sequences # 6  
consensus_7569#1 length = 380 sequences # 1  

consensusID : consensus_7569#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1346
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAATGCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAACTGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTACGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTTTAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGAGCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCGATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCGATTGAAGGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGAGCGTAATGCTTCNCGCAACCTGATGATTTACT]

[+] EMBL BM605954             [CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAATGCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAACTGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTACGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTTTAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGAGCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCGATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM577141             [                                                                                                                                                                                                                                                                                            ccgCGCTCTTCGGCGAGCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCGATTGCGCACAAGCATTTTTAAATCGCGCGGCGTGTTTAAAGGTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGCATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACACGAACGTTCCGAACACCCGCAAATGGAACGTGCTTA                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX621903             [                                                                                                                                                                                                                                                                                                                                                                                                                 GTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCA                                                                                                                                 ]
[+] EMBL BX618897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCGATTGAAGGAGGTAAAGTCGAATAACC                                                                  ]
[+] EMBL BX620660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACNAACGTTGTCACGCGATTGAAGGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGAGCGTAATGCTTCNCGCAACCTGATGATTTACT]
[+] EMBL BX617983             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCC                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_7569#0 CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAAT GCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAAC TGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTA CGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTT TAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGA GCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCG ATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCC AATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCT TCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGT GAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGG AGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGT AGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGT GTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGC ACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGC GATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCAC TGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTG CCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCT GTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTAC ACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCG TATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGAT CGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCGATTGAA GGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGAGCGTAA TGCTTCNCGCAACCTGATGATTTACT



consensusID : consensus_7569#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 380
fasta sequence
                              [AGGCAAGAATCGCCACGAGGTTGTAGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGCAGGTATAGTTTCTCAAACAG]

[+] EMBL BX466591             [AGGCAAGAATCGCCACGAGGTTGTAGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGCAGGTATAGTTTCTCAAACAG]


>consensus_7569#1 AGGCAAGAATCGCCACGAGGTTGTAGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCA GACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTA GAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCG GCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGT TCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGG AACGTGCTTAGCCATTGCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGC AGGTATAGTTTCTCAAACAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7569#0      CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAAT 60
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      GCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAAC 120
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      TGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTA 180
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      CGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTT 240
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      TAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGA 300
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      GCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCG 360
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      ATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCC 420
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      AATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCT 480
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      TCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGT 540
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      GAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGG 600
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      AGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGT 660
consensus_7569#1      ---------------------------------------AGGCAAGAATCGCCACGAGGT 21
                                                             *  * * *  *  * * * **

consensus_7569#0      AGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCT-GGCAGACACGCTTAGCACGG 719
consensus_7569#1      TGT-----AGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCAGACACGCTTAGCACGG 76
                       **     ******************************* ********************

consensus_7569#0      TGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATG 779
consensus_7569#1      TGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATG 136
                      ************************************************************

consensus_7569#0      CACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTG 839
consensus_7569#1      CACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTG 196
                      ************************************************************

consensus_7569#0      CGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCA 899
consensus_7569#1      CGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCA 256
                      ************************************************************

consensus_7569#0      CTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATT 959
consensus_7569#1      CTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATT 316
                      ********************** *************************************

consensus_7569#0      GCCGTACGCTGATAT-GCCGGGACGGTGCAGCCAAGCTGG-AGCAG---TATGTTTTCAA 1014
consensus_7569#1      GCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGCAGGTATAGTTTCTCAA 376
                      *************** ************************ *****   **  ** ****

consensus_7569#0      ACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGC 1074
consensus_7569#1      ACAG-------------------------------------------------------- 380
                      ****                                                        

consensus_7569#0      CTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACAC 1134
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      TTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCA 1194
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      GTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCG 1254
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      ATTGAAGGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGA 1314
consensus_7569#1      ------------------------------------------------------------
                                                                                  

consensus_7569#0      GCGTAATGCTTCNCGCAACCTGATGATTTACT 1346
consensus_7569#1      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)