These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7579#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 725 fasta sequence [GAATTCCCCGAGGTATGGACAGATATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGCATCAGCCGCAGGCCAACATAGCGGTGTTTATGTTTCTGTTTATGCTGTGCGCGGCGGAGGTTGTGTTTATCAAGCTGCTCGGCGCTGACGTCGCTCGGAAGTGGTGATATATTCGGCACTGCANCCGGCAGCACCAACTGGCGCATCAAACGAATATATACA] [+] EMBL AL932313 [GAATTCCCCGAGGTATGGACAGATATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGCATCAGCCGCAGGCCAACATAGCGGTGTTTATGTTTCTGTTTATGCTGTGCGCGGCGGAGGTTGTGTTTATCAAGCTGCTCGGCGCTGACGTCGCTCGGAAGTGGTGATATATTCGGCACTGCANCCGGCAGCACCAACTGGCGCATCAAACGAATATATACA] consensusID : consensus_7579#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 709 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCG------CGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC---GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT-AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA-ACCA----AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAAACCCC-GCCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGC] [+] EMBL BM621821 [CCGCCCACGCGTCCGCCCACGCGTCCG CGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA ACCA AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAAACCCC GCCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAA ] [+] EMBL BM635445 [CCGCCCACGCGTCCGCCCACGCGTCCGGCGCCACGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA ACCA AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGAT ] [+] EMBL BM576407 [ ccgaGCG CCA CGAAACATCGCTGACGTTGACGTTACTGTTCCTGGCGGTGATCATAGCCATAGGAGGAGTAGCAGCAGGAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGCACAGCCGAAAAGAGCGAAGAAGAAAAAAAAAACTGGACAAGATTATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGG ] [+] EMBL BM622614 [ CCG CGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA ACCA AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAAACCCC TCCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGC ] [+] EMBL BX627164 [ GTTCCTGGCGGTGATCATAGCCATAGGAGGAGTAGCAGCAGGAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGCACAGCCGAAAAGAGCGAAGAAGAAAAAAAAAACTGGACAAGATTATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGC] [+] EMBL BM590346 [ TCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAACAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7579#0 ------------------------------------------------------------ consensus_7579#1 CCGCCCACGCGTCCGCCCACGCGTCCGCGAAACATCGCTGACGTTGACGTTACCGTTACT 60 consensus_7579#0 ------------------------------------------------------------ consensus_7579#1 GGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCT 120 consensus_7579#0 -------------------------------GAATTCCCCGAGGTATGGACAGA--TATT 27 consensus_7579#1 CATCGATCGTGCGAGTACAACCGAAAAGAGCGAAGAAAACAAAAACTGGAAGAGATTATT 180 *** * * **** **** consensus_7579#0 TTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTG 87 consensus_7579#1 TTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTG 240 *************** ********* **************************** **** consensus_7579#0 TCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTG 147 consensus_7579#1 TCTGTGTTAAGGGGACACCTACTTTAGC-CCTTCTTGAAAGACAATCGTTCGTGCGCGTG 299 ************************** ******* ******* ******* ******* consensus_7579#0 TTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTT 207 consensus_7579#1 TTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTT 359 ***************************** ****************************** consensus_7579#0 GTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCC 267 consensus_7579#1 GTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTC 419 ************************************************* ******** * consensus_7579#0 CCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAG 327 consensus_7579#1 CCA-ACCA----AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAG 474 *** **** **** ****************** ************************ consensus_7579#0 CGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAA 387 consensus_7579#1 CGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAA 534 ************************************** ********************* consensus_7579#0 ACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAG 447 consensus_7579#1 ACCCCG-CCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAG 593 ****** ************************** ********* * * ************ consensus_7579#0 CTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCT 507 consensus_7579#1 CTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCT 653 ************************************************************ consensus_7579#0 AGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGCATCA 567 consensus_7579#1 AGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGC---- 709 ******************************************************** consensus_7579#0 GCCGCAGGCCAACATAGCGGTGTTTATGTTTCTGTTTATGCTGTGCGCGGCGGAGGTTGT 627 consensus_7579#1 ------------------------------------------------------------ consensus_7579#0 GTTTATCAAGCTGCTCGGCGCTGACGTCGCTCGGAAGTGGTGATATATTCGGCACTGCAN 687 consensus_7579#1 ------------------------------------------------------------ consensus_7579#0 CCGGCAGCACCAACTGGCGCATCAAACGAATATATACA 725 consensus_7579#1 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||