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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 960 fasta sequence
[CCGCCCGCTTCGAGTAAAAATCGATCGACCGCACTGTGGCGTAGTTAGTTTAAATTTTTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCAAGCGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCTAACCACTCCAGCGCAGTTTCGTTGTGTGTGCTTGCTTGCAATCACAGCAATCGGAGCATCGCAAACTGTACCGCCCGGAAGAACTGCTTGAAGGAGGAGCAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAC-AGCCCGTACGTCAA-TTCCTCCGACT-CGCAGTACGCCAGGGAGTTCGAGGAG-CAGATGCAAGCGCTGGTTATTAA-CTACGACA-TTGAGGAACCGTGCGCC-GAGGAGCAACATTCA--GCGCGCTAC-TCTTTCACGAGCACGCCCCAGCCTTCCGGAAGTGGACTGAGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCTGACGAAGCGGCACGAGGGGCAGAAGAAGAGGTGCCGAAGAAGAAAATAGCTATGAATTTTGACCAGTGCGGTCCCGAATCGTCCCAGGGTTCGTTCGAGTCGAGCGAAGGTATTTCGATGCGGTACGATTCCTGCAACTCGATCGACGACATACCGCATCTGGTTTCGTGTGATGAATTTGCCTGTGATGCGCCCACGATTCGCGGAGAGAAACGGAAGCTCGGCAGTCCCGTTCCGTTCGATGCACTGCAGGGAGAGGAAGATTCGATGCTGGAACCGGCCAAATATGATCTGTACCCGAGCGTATCGACGCCTGCTACGACCAAACTGCTTACTGTTCCTGCGAAACGAACGTATGACGAGGCTAATAGGTAGAAGTTAGGTTATGAAGTTTAAGCTTTATCTTAATAGCGTAGAATTTGCTGTGCACGTGAACTCCAGCTC]
[+] EMBL BM580642 [CCGCCCGCTTCGAGTAAAAATCGATCGACCGCACTGTGGCGTAGTTAGTTTAAGTTTTTATCGATAAGCTTTACTTTCTTGAGCAATGTACACCAAAGCAAGCGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCTAACCACTCCAGCGCAGTTTCGTTGTGTGTGCTTGCTTGCAATCACAGCAATCGGAGCATCGCAAACTGTACCGCCCGGAAGAACTGCTTGAAAGTGGAGTAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAC AGCCCGTACGTCAA TTCCTCCGACT CGCAGTACGCCAGGGAGTTCGAGGAG CAGATGCAAGCGCTGGTTATTAA CTACGACA TTGAGGAACCGTGCGCT GAGGAGCAACATTCA GCGCGCTAC TCTTTCACGAGTACGCCCCAGCCTTCCGGAAGTGAGCTGAGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCTGACGAAGCGGCACGAGGGGCAGAAGAAGAGGTGCCGAAGAAGAAAATAGCTATGAATTTTGACCAGTGCGGTCCCGAATCGTCCCAGGGTTCGTTCGAGTCGAGCGAAG ]
[+] EMBL BX621350 [ AAAAATCGATCGACCGCACTGTGGCGTAGTTAGTTTAAATTTTTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCAAGCGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCTAACCACTCCAGCGCAGTTTCGTTGTGTGTGCTTGCTTGCAATCACAGCAATCGGAGCATCGCAAACTGTACCGCCCGGAAGAACTGCTTGAAGGAGGAGCAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAC AGCCCGTACGTCAA TTCCTCCGACT CGCAGTACGCCAGGGAGTTCGAGGAG CAGATGCAAGCGCTGGTTATTAA CTACGACA TTGAGGAACCGTGCGCC GAGGAGCAACATTCA GCGCGCTAC TCTTTCACGAGCACGCCCCAGCCTTCCGGAAGTGGACTGAGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCTGACGAAGCGGCACGAGGGGCAGAAGAAGAGGTGCCGAAGAAGAAAATAGCTATGAATTTTGACCAGTGCGGTCCCGAATCGTCCCAGGGTTCGTTCGAGTCGAGCGAAGGTATTTCGATGCGGTACGATTCCTGCAACTCGATCGACGACATACCGCATCTGGTTTCGTGTGATGAATTTGCCTGTGATGCGCCCACGATTCGCGGAGAGAAACGGAAGCTCGGCAGTCCCGTTCCGTTCG ]
[+] EMBL AL695998 [ gcccnggaaTTTTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCAAGCGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCTAACCACTCCAGCGCAGTTTCGTTGTGTGTGCTTGCTTGCAATCACAGCAATCGGAGCATCGCAAACTGTACCGCCCGGAAGAACTGCTTGAAGGAGGAGCAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCACTAGCCCGTACGTCAAGTTCCTCCGACTCCGCAGTACGCCAGGGAGTTCGNCGAGCCAGATGCAAGCGCTGGTTATTAAGCTACGANACTTGAGGAACCGTGCGCCTGAGGAGCAACATTCACGGGGCGCTACATCTTTCACGA ]
[+] EMBL CNS09MIY [ CCAAAGCAAGCGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAG TGCTAACCACTCCAGCGCAGTTTCGTTGTGTGTGCTTGCTTGCAATCACAGCAATCGGAGCATCGCAAACTGTACCGCCCGGAAGAACTGCTTGAAGGAGGAGCAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAC AGCCCGTACGTCAA TTCCTCCGACT CGCAGTACGCCAGGGAGTTCGAGGAG CAGATGCAAGCGCTGGTTATTAA CTACGACA TTGAGGAACCGTGCGCC GAGGAGCAACATTCA GCGCGCTAC TCTTTCACGAGCACGCCCCAGCCTTCCGGAAGTGGACTGAGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCTGACGAAGCGGCACGAGGGGCAGAAGAAGAGGTGCCGAAGAAGAAAATAGCTATGAATTTTGACCAGTGCGGTCCCGAATCGTCCCAGGGTTCGTTCGAGTCGAGCGAAGGTATTTCGATGCGGTACGATTCCTGCAACTCGATCGACGACATACCGCATCTGGTTTCGTGTGATGAATTTGCCTGTGATGCGCCCACGATTCGCGGAGAGAAACGGAAGCTCGGCAGTCCCGTTCCGTTCGATGCACTGCAGGGAGAGGAAGATTCGATGCTGGAACCGGCCAAATATGATCTGTACCCGAGCGTATCGACGCCTGCTACGACCAAACTGCTTACTGTTCCTGCGAAACGAACGTATGACGAGGCTAATAGGTAGAAGTTAGGTTATGAAGTTTAAGCTTTATCTTAATAGCGTAGAATTTGCTGTGCACGTGAACTCCAGCTC]
[+] EMBL BX613952 [ AGGAGCAACATTCA CCGCGCTAC TCTTTCACGAGCACGCCCCAGCCTTCCGGAAGTGGACTGGGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCTGACGAAGCGGTACGAGGGGCAGAAGAAGAGGTGCCGAAGAAGAAAATAGCTATGAATTTTGACCAGTGCGGTCCCGAATCGTCCCAGGGTTCGTTCGAGTCGAGCGAAGGTATTTCGATGCGGTACGATTCCTGCAACTCGATCGACGACATACCGCATCTGGTTTCGTGTGATGAATTTG ]
[+] EMBL BX613953 [ ACATTCA CCGCGCTAC TCTTTCACGAGCACGCCCCAGCCTTCCGGAAGTGGACTGGGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCTGACGAAGCGGTACGAGGGGCAGAAGAAGAGGTGCCGAAGAAGAAAATAGCTATGAATTTTGACCAGTGCGGTCCCGAATCGTCCCAGGGTTCGTTCGAGTCGAGCGAAGGTATTTCGATGCGGTACGATTCCTGCAACTCGATCGACGACATACCGCATCTGGTTTCGTGTGATGAATTTGCCTGTGATGCGCCCACGATTCGCGGAGAGAAACGGAAGCTCGGCAGTCCCGTTCCGTTCGATGCACTGCAGGGAGAGGAATATTCGATGCTGGAACCGGCCAAATATGATCTGTACCCGAGCGTATCGACGCCTGCTACGACCAAACTGCTTACTGTTCCTGCGAAACGAACGTATGACGAGGCTAATAGGTAGAAGTTAGGTT ]
consensusID : consensus_7594#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[AATNGCCCGAGGTTAACAAATATCCCGCTTCGAGGTAAAATCGATCGACCGCACTGTGGCGTAGTTAGTTTAAGTTATTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCAAGTGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCTAACCACTCCAGCACAGTTTCGTTGTGTGTGCTATGCTTGCAATCACAGCAATCGGAGCATCTGCAAACTGTACCTGCCCGGAAGAACTGCTTGAAAGTGGAGTAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAGAGCCCGTACGTCAATTCCTCCGACTCGCAGTACGCCAGGGAGTTCGAGGAGCAGATGCAAGCGCTGGTTATTAACTACGACATTGAGGAACCGTGCGCTGAGTGAGCAACATTCAGCGCGCTACTCTTTCACGAGCACGCCCCAGNCTTCCGGAAGTGGGCTGAGGCTGGCGCGTACGAAGCCAACCAACACTGTAACGGCTGACGAGTGGCGGCAACGATGTGGCAGTACNGCAAGAGGTTGCCGCACGAAGNNAACAATAGCTATGAATTTNTGAGCCAGTGCNCGGTCCCGNAATCGGTCCCAGNGGTTCCGNCTCGCAGTCNNGCGCCGAGGTATTTCCGAAT]
[+] EMBL AL930087 [AATNGCCCGAGGTTAACAAATATCCCGCTTCGAGGTAAAATCGATCGACCGCACTGTGGCGTAGTTAGTTTAAGTTATTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCAAGTGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCTAACCACTCCAGCACAGTTTCGTTGTGTGTGCTATGCTTGCAATCACAGCAATCGGAGCATCTGCAAACTGTACCTGCCCGGAAGAACTGCTTGAAAGTGGAGTAGGAAGCAACATGGAGTACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAGAGCCCGTACGTCAATTCCTCCGACTCGCAGTACGCCAGGGAGTTCGAGGAGCAGATGCAAGCGCTGGTTATTAACTACGACATTGAGGAACCGTGCGCTGAGTGAGCAACATTCAGCGCGCTACTCTTTCACGAGCACGCCCCAGNCTTCCGGAAGTGGGCTGAGGCTGGCGCGTACGAAGCCAACCAACACTGTAACGGCTGACGAGTGGCGGCAACGATGTGGCAGTACNGCAAGAGGTTGCCGCACGAAGNNAACAATAGCTATGAATTTNTGAGCCAGTGCNCGGTCCCGNAATCGGTCCCAGNGGTTCCGNCTCGCAGTCNNGCGCCGAGGTATTTCCGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7594#0 --------------------CCGCCCGCTTCGAGTAAAAATCGATCGACCGCACTGTGGC 40
consensus_7594#1 AATNGCCCGAGGTTAACAAATATCCCGCTTCGAGGTAAAATCGATCGACCGCACTGTGGC 60
*********** ************************
consensus_7594#0 GTAGTTAGTTTAAATTTTTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCA 100
consensus_7594#1 GTAGTTAGTTTAAGTTATTATCGATTAGCTTTACTTTCTTGAGCAATGTACACCAAAGCA 120
************* ** *******************************************
consensus_7594#0 AGCGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCT 160
consensus_7594#1 AGTGTATATTCTGCATTAGTGCGCGTTGCCATAGTTACAAGATAGCGGCTGTAAGCTGCT 180
** *********************************************************
consensus_7594#0 AACCACTCCAGCGCAGTTTCGTTGTGTGTGCT-TGCTTGCAATCACAGCAATCGGAGCAT 219
consensus_7594#1 AACCACTCCAGCACAGTTTCGTTGTGTGTGCTATGCTTGCAATCACAGCAATCGGAGCAT 240
************ ******************* ***************************
consensus_7594#0 C-GCAAACTGTACC-GCCCGGAAGAACTGCTTGAAGGAGGAGCAGGAAGCAACATGGAGT 277
consensus_7594#1 CTGCAAACTGTACCTGCCCGGAAGAACTGCTTGAAAGTGGAGTAGGAAGCAACATGGAGT 300
* ************ ******************** * **** *****************
consensus_7594#0 ACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCACAGCCCGTACGTCAATTCCTCCG 337
consensus_7594#1 ACTCCAGTTTCGTTCGCGAGCTGCGCAGGGAATCCCAGAGCCCGTACGTCAATTCCTCCG 360
************************************* **********************
consensus_7594#0 ACTCGCAGTACGCCAGGGAGTTCGAGGAGCAGATGCAAGCGCTGGTTATTAACTACGACA 397
consensus_7594#1 ACTCGCAGTACGCCAGGGAGTTCGAGGAGCAGATGCAAGCGCTGGTTATTAACTACGACA 420
************************************************************
consensus_7594#0 TTGAGGAACCGTGCGCCGAG-GAGCAACATTCAGCGCGCTACTCTTTCACGAGCACGCCC 456
consensus_7594#1 TTGAGGAACCGTGCGCTGAGTGAGCAACATTCAGCGCGCTACTCTTTCACGAGCACGCCC 480
**************** *** ***************************************
consensus_7594#0 CAGCCTTCCGGAAGTGGACTGAGGCTGGCGCGTACGAAGCCAACCACCACTGTATCGGCT 516
consensus_7594#1 CAGNCTTCCGGAAGTGGGCTGAGGCTGGCGCGTACGAAGCCAACCAACACTGTAACGGCT 540
*** ************* **************************** ******* *****
consensus_7594#0 GACGAA--GCGGCA-CGAGG-GGCAG---AAGAAGAGGT-GCCG----AAGAAGAAAATA 564
consensus_7594#1 GACGAGTGGCGGCAACGATGTGGCAGTACNGCAAGAGGTTGCCGCACGAAGNNAACAATA 600
***** ****** *** * ***** ******* **** *** * ****
consensus_7594#0 GCTATGAATTTT--GACCAGTGCG--GTCCCGAATC--GTCCCAGGGTTC---GTTCG-A 614
consensus_7594#1 GCTATGAATTTNTGAGCCAGTGCNCGGTCCCGNAATCGGTCCCAGNGGTTCCGNCTCGCA 660
*********** ******* ****** * ******* * * *** *
consensus_7594#0 GTCGAGCG--AAGGTATTTCGATGCGGTACGATTCCTGCAACTCGATCGACGACATACCG 672
consensus_7594#1 GTCNNGCGCCGAGGTATTTCCGAAT----------------------------------- 685
*** *** *********
consensus_7594#0 CATCTGGTTTCGTGTGATGAATTTGCCTGTGATGCGCCCACGATTCGCGGAGAGAAACGG 732
consensus_7594#1 ------------------------------------------------------------
consensus_7594#0 AAGCTCGGCAGTCCCGTTCCGTTCGATGCACTGCAGGGAGAGGAAGATTCGATGCTGGAA 792
consensus_7594#1 ------------------------------------------------------------
consensus_7594#0 CCGGCCAAATATGATCTGTACCCGAGCGTATCGACGCCTGCTACGACCAAACTGCTTACT 852
consensus_7594#1 ------------------------------------------------------------
consensus_7594#0 GTTCCTGCGAAACGAACGTATGACGAGGCTAATAGGTAGAAGTTAGGTTATGAAGTTTAA 912
consensus_7594#1 ------------------------------------------------------------
consensus_7594#0 GCTTTATCTTAATAGCGTAGAATTTGCTGTGCACGTGAACTCCAGCTC 960
consensus_7594#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||