cluster # 7607

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Anopheles gambiae
cluster # 7607 cluster # 7607 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7607#0 length = 701 sequences # 1

consensus_7607#1 length = 613 sequences # 1
consensus_7607#2 length = 607 sequences # 5

consensusID : consensus_7607#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 701
fasta sequence

                              [AAGGATCTGATTCTGCTCTAAAACAACCTGCGACTATATTCGATTTGGTTTCACAGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCCAACCCGCAGTACAGCTACAGTTACGCGGTATCGGTAAGTATGCACGTCCAGCAACACCAGCGATCCATCATGGAATCACTGTTTACATTTTCCACCTGTCCCTCCGAAATTGCTAGGATGCTCTGACCGGTGATAACAAGAGCCAGCAGGAATCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGCACCCAGCGTGTCGTTGAGTACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTACCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATACTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAAATAAAGTGCAAG]

[+] EMBL BX622444             [AAGGATCTGATTCTGCTCTAAAACAACCTGCGACTATATTCGATTTGGTTTCACAGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCCAACCCGCAGTACAGCTACAGTTACGCGGTATCGGTAAGTATGCACGTCCAGCAACACCAGCGATCCATCATGGAATCACTGTTTACATTTTCCACCTGTCCCTCCGAAATTGCTAGGATGCTCTGACCGGTGATAACAAGAGCCAGCAGGAATCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGCACCCAGCGTGTCGTTGAGTACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTACCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATACTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAAATAAAGTGCAAG]




>consensus_7607#0
AAGGATCTGATTCTGCTCTAAAACAACCTGCGACTATATTCGATTTGGTTTCACAGTTTG
CCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCT
ACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCCAACC
CGCAGTACAGCTACAGTTACGCGGTATCGGTAAGTATGCACGTCCAGCAACACCAGCGAT
CCATCATGGAATCACTGTTTACATTTTCCACCTGTCCCTCCGAAATTGCTAGGATGCTCT
GACCGGTGATAACAAGAGCCAGCAGGAATCCCGCTCGGGAGATGTCGTCAGCGGATCGTA
CTCGCTCATCGAGCCCGATGGCACCCAGCGTGTCGTTGAGTACACTGCCGACCCGGTCAA
CGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGC
CAAGTTCGCTGCTCCGCTGGCCTACCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGG
TTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGT
TTACCCCAAAATACTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGT
AGTTATTTTTGTTTGACTGTGTGACTGAAATAAAGTGCAAG

consensusID : consensus_7607#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 613
fasta sequence

                              [AATNGCCCGAGTTNCCTCCGGTTTGCGTTCTTGCCGCGTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAAGCTTCACGAAACATGTAGTTATAGTACAGACCTGTGTGACTGAATAAAGTGCAAGATGGTTATAAAAATCATAAACAAACAAAGACAAAA]

[+] EMBL AL932537             [AATNGCCCGAGTTNCCTCCGGTTTGCGTTCTTGCCGCGTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAAGCTTCACGAAACATGTAGTTATAGTACAGACCTGTGTGACTGAATAAAGTGCAAGATGGTTATAAAAATCATAAACAAACAAAGACAAAA]




>consensus_7607#1
AATNGCCCGAGTTNCCTCCGGTTTGCGTTCTTGCCGCGTCGTCGCTACCGCCAGTGCCGT
CGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCC
GTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCT
CACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTA
CTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAA
CGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGC
CAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGG
TTAAATCATGCCTCACGGATATCCCCCACCTGTCTAGATATTTATTAGTCGTCCCATGTT
TACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAAGCTTCACGAAACATGTA
GTTATAGTACAGACCTGTGTGACTGAATAAAGTGCAAGATGGTTATAAAAATCATAAACA
AACAAAGACAAAA

consensusID : consensus_7607#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 607
fasta sequence

                              [AGGACCCAACACAGCACAAGAGAAAATGGCCCTCCGGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCAAGATGGTTATA]

[+] EMBL BX622702             [AGGACCCAACACAGCACAAGAGAAAATGGCCCTCCGGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCAAGATGGTTATA]
[+] EMBL BX626143             [               ACAAGAGAAAATGGCCCTCCGGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCAAGATG      ]
[+] EMBL BX626727             [                         ATGGCCCTCCGGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTACGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCAAGATGGTTA  ]
[+] EMBL BX621845             [                          TGGCCCTCCGGTTTGCCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCCAACCCGCAGTACAGCTAC GTTACGCGGTATCGGATGCTCTGACCGGTGATAACAAGAGCCAGCAGGAATCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGCACCCAGCGTGTCGTTGAGTACACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTACCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATACTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCAAGATGGTTAT ]
[+] EMBL BX627660             [                                                                ACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCCAACCCGCAGTACAGCTACAGTTACGCGGTATCGGATGCTCTGACCGGTGATAACAAGAGCCAGCAGGAATCCCGCTCGGGAGATGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGCACCCAGCGTGTCGTTGAGTACACTGCCGACCCGGTCAATGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTACCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGTTTACCCCAAAATACTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCA           ]




>consensus_7607#2
AGGACCCAACACAGCACAAGAGAAAATGGCCCTCCGGTTTGCCGTTCTTGCCGCGTTCGT
CGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCTACGGGGCATACCCGGCGGT
GGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACCCACAGTACAGCTACAGTTA
CGCAGTATCGGATGCTCTCACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGA
TGTCGTCAGCGGATCGTACTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATA
CACTGCCGACCCGGTCAACGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAA
GGCTGTGGCCCCAGTAGCCAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGT
TGCGGCTCCGCTGTACGGTTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATAT
TTATTAGTCGTCCCATGTTTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATG
AGAGCTTCACGAAAATGTAGTTATTTTTGTTTGACTGTGTGACTGAATAAAGTGCAAGAT
GGTTATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7607#1      ----------------------------------AATNGCCCGAGTTNCC-TCCGGTTTG 25
consensus_7607#2      -------------------AGGACCCAACACAGCACAAGAGAAAATGGCCCTCCGGTTTG 41
consensus_7607#0      AAGGATCTGATTCTGCTCTAAAACAACCTGCGACTATATTCGATTTGGTTTCACAGTTTG 60
                                                                   *       * *****

consensus_7607#1      C-GTTCTTGCCGCGT-CGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCT 83
consensus_7607#2      CCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCT 101
consensus_7607#0      CCGTTCTTGCCGCGTTCGTCGCTACCGCCAGTGCCGTCGCCATTGGATATCCGGCTCCCT 120
                      * ************* ********************************************

consensus_7607#1      ACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACC 143
consensus_7607#2      ACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCTAACC 161
consensus_7607#0      ACGGGGCATACCCGGCGGTGGCCAAGGTTGCTGCTCCGTTGGCCGACTACGACCCCAACC 180
                      ******************************************************* ****

consensus_7607#1      CACAGTACAGCTACAGTTACGCAGTATCGG------------------------------ 173
consensus_7607#2      CACAGTACAGCTACAGTTACGCAGTATCGG------------------------------ 191
consensus_7607#0      CGCAGTACAGCTACAGTTACGCGGTATCGGTAAGTATGCACGTCCAGCAACACCAGCGAT 240
                      * ******************** *******                              

consensus_7607#1      -----------------------------------------------------ATGCTCT 180
consensus_7607#2      -----------------------------------------------------ATGCTCT 198
consensus_7607#0      CCATCATGGAATCACTGTTTACATTTTCCACCTGTCCCTCCGAAATTGCTAGGATGCTCT 300
                                                                           *******

consensus_7607#1      CACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTA 240
consensus_7607#2      CACCGGTGACAACAAGAGCCAGCAGGAGTCCCGCTCGGGAGATGTCGTCAGCGGATCGTA 258
consensus_7607#0      GACCGGTGATAACAAGAGCCAGCAGGAATCCCGCTCGGGAGATGTCGTCAGCGGATCGTA 360
                       ******** ***************** ********************************

consensus_7607#1      CTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAA 300
consensus_7607#2      CTCGCTCATCGAGCCCGATGGTACCCAGCGTGTCGTTGAATACACTGCCGACCCGGTCAA 318
consensus_7607#0      CTCGCTCATCGAGCCCGATGGCACCCAGCGTGTCGTTGAGTACACTGCCGACCCGGTCAA 420
                      ********************* ***************** ********************

consensus_7607#1      CGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGC 360
consensus_7607#2      CGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGC 378
consensus_7607#0      CGGATTCAACGCCGTCGTCCACCGTGGAGCTGGTGTGGTAAAGGCTGTGGCCCCAGTAGC 480
                      ************************************************************

consensus_7607#1      CAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGG 420
consensus_7607#2      CAAGTTCGCTGCTCCGCTGGCCTATCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGG 438
consensus_7607#0      CAAGTTCGCTGCTCCGCTGGCCTACCCCGCCGTCGCCAAGGTTGCGGCTCCGCTGTACGG 540
                      ************************ ***********************************

consensus_7607#1      TTAAATCATGCCTCACGGATATCCCCCACC-TGTCTAGATATTTATTAGTCGTCCCATGT 479
consensus_7607#2      TTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGT 498
consensus_7607#0      TTAAATCATGCCTCACGGATATCCCCCACCCTGTCTAGATATTTATTAGTCGTCCCATGT 600
                      ****************************** *****************************

consensus_7607#1      TTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGA-AGCTTCACGAAACATG 538
consensus_7607#2      TTACCCCAAAATCCTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAA-ATG 557
consensus_7607#0      TTACCCCAAAATACTCCCATCCCTTCACATCCTTTGCAAATGAGAGCTTCACGAAA-ATG 659
                      ************ ****************************** ************ ***

consensus_7607#1      TAGTTATAGT-ACAGACCTGTGTGACTGAA-TAAAGTGCAAGATGGTTATAAAAATCATA 596
consensus_7607#2      TAGTTATTTTTGTTTGACTGTGTGACTGAA-TAAAGTGCAAGATGGTTATA--------- 607
consensus_7607#0      TAGTTATTTTTGTTTGACTGTGTGACTGAAATAAAGTGCAAG------------------ 701
                      *******  *       ************* ***********                  

consensus_7607#1      AACAAACAAAGACAAAA 613
consensus_7607#2      -----------------
consensus_7607#0      -----------------