These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_761#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGAAGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAGAGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCGGCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGCCCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACACCATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATGCGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGGGGCGATGGGAGCGAAAACAAAGCAACCTTCCCATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCAT] [+] EMBL BM579852 [CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGAAGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAGAGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCGGCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGCCCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACACCATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATGCGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGGGGCGATGGGAGCGAAAACAAAGCAACCTTCCCATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCAT] consensusID : consensus_761#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence [AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGGAGGGCGATGGGAGCGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTTGTAGTACGCAGTGTTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGAACNAGAGTAAATGCTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA] [+] EMBL BX469240 [AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCTCACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATCTTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGGAGGGCGATGGGAGCGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATAGAAGCATTTGTGCATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTTGTAGTACGCAGTGTTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGAACNAGAGTAAATGCTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_761#0 CCGGTAGTTTTTGCCTGCGAGGTGGGGTGCAACCGGTGAGAGCAGATATGAACAGTAGGA 60 consensus_761#1 ------------------------------------------------------------ consensus_761#0 AGGAGGAAGTAGAGGGAAGCCATGAGAGAGAGAGAGAGAAAATGATAGAGAAAGAGAGAG 120 consensus_761#1 ------------------------------------------------------------ consensus_761#0 AGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGTGAGAGAGAGAGCGAGAGAGCGCCAG 180 consensus_761#1 ------------------------------------------------------------ consensus_761#0 AGGGGGAAGGTGGTTACATCAACAATGTGATTTTTATACTCTGTAGTAATTAGGTAGTCG 240 consensus_761#1 ------------------------------------------------------------ consensus_761#0 GCTTTTAATTTCAGAATATTATTTTTTGTTTTTTATTTTAAATGTTAGTTTCGTAAGCGC 300 consensus_761#1 ------------------------------------------------------------ consensus_761#0 CCGCCGAACAACAAACAAAACAAGAAGAACAGAATGGTGTGTGTGTGTGCTCTCTCACAC 360 consensus_761#1 ------------------------------------------------------------ consensus_761#0 CATCCCCTGTGCGCCTTCGGGTGGTCGGGCGCGCCACATCAGTGACCAGTGATTGCAATG 420 consensus_761#1 ------------------------------------------------------------ consensus_761#0 CGCCCCCAAGGGTTATCCCCCAGGACCCACATCGGTGTTTGTTGGCTTTTTTTTTTTGCT 480 consensus_761#1 -------------AATCGCACGAGGTGTACATGCCTGTTGGCTTTTTTTCCCTTTGTGCT 47 *** * * * **** **** * * *** *** **** consensus_761#0 CACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATC 540 consensus_761#1 CACACGCTCACAATGCTGTGTCGATGAGTTTTCTGGCGCGTTCGAACAGCGCCCGACATC 107 ************************************************************ consensus_761#0 TTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCCCAGAGAGGGG 600 consensus_761#1 TTGGAGAGGGGAGAAAAGTGAAATCGGGAAGAAGACAACAACCAATCCCACAGAGAGGGG 167 ************************************************* ********** consensus_761#0 --GGCGATGGGAGCGAA-AACAAAGCAACCTTCCC-ATTTGCGCATTTTCGTTGTGTATA 656 consensus_761#1 AGGGCGATGGGAGCGAAGAACAAAGCAACCTTCCCGATTTGCGCATTTTCGTTGTGTATA 227 *************** ***************** ************************ consensus_761#0 GAAGCATTTGTGCAT--------------------------------------------- 671 consensus_761#1 GAAGCATTTGTGCATGGTAGTTTTAACATCCCTTGTGTGGTGTAAACCTGGTAGTTTGTT 287 *************** consensus_761#0 ------------------------------------------------------------ consensus_761#1 GTAGTACGCAGTGTTNAAGAGTAGTGAATAGTAGTGGTACGAGTGTCCAAAGGCGAAAGA 347 consensus_761#0 ------------------------------------------------------------ consensus_761#1 ACNAGAGTAAATGCTGGCCACTGACGCGGAGAAGTAAGCGGGGGAAGGGACGACGATCNA 407 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||