These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 260 fasta sequence [GTTTTTCAGAGCTTGGATCTGTAACGGCGCAGAACAGAAAACGAAACAAAGACGTAGA-GTTGAGCAAGCAGGGTCAGGCAA-AGCGTGGAGAGCCGGCTGAGTCTAGG-TAGGCTCCAAGGGAGC-GCCGGACAAAGGCCCGGTCTCGACCTG-AGCTTTAAACTTACCTAGACGGCGGACGCAGTTCAGGAGGCACCACAGG-CGGGAGGCGGCAGAACGCGACTCAACCGGCGT-GGATGGCGGCCTCAGGTAGGGCGGCGGGC] [+] EMBL CNS09JRY [GTTTTTCAGAGCTTGGATCTGTAACGGCGCAGAACAGAAAACGAAACAAAGACGTAGA GTTGAGCAAGCAGGGTCAGGCAA AGCGTGGAGAGCCGGCTGAGTCTAGG TAGGCTCCAAGGGAGC GCCGGACAAAGGCCCGGTCTCGACCTG AGCTTTAAACTTACCTAGACGGCGGACGCAGTTCAGGAGGCACCACAGG CGGGAGGCGGCAGAACGCGACTCAACCGGCGT GGATGGCGGCCTCAGGTAGG ] [+] EMBL CNS09NLO [ TCTGTAACGGCGCAGAACAGAAAACGAAACAAAGACGTAGATGTTGAGCAAGCAGGGTCAGGCAA AGCGTGGAGAGCCGGCTGAGTCTAGG TAGGCTCCAAGGGAGCGGCCGGACAAAGGCCCGGTCTCGACCTG AGCTTTAAACTTACCTAGACGGCGGACGCAGTTCAGGAGGCACCACAGG CGGGA ] [+] EMBL CNS08QES [ TCTGTAACGGCGCAGAACAGAAAACGAAAAAAAGACGTAGA GTTGAGCAAGCAGGGTCAGGCAA AACGTGGAGAGCCGGCTGAGTCTAG ] [+] EMBL CNS0902X [ GACGTAGA GTTGAGCAAGCAGGGTCAGGCAATAGCGTGGAGAGCCGGCTGAGTCTAGGTTAGGCTCCAAGGGAGC GCCGGACAAAt ] [+] EMBL CNS08DDG [ A GTTGAGCAAGCAGGGTCAGGCAA AGCGTGGAGAGCCGGCTGAGTCTAGG TAGGCTCCAAGGGAGC GCCGGACAAAGGCCCGGTCTCGACCTG AGCTTTAAACTTACCTAGACGGCGGACGCAGTTCAGGAGGCACCACAGGACGGGAGGCGGCAGAAC ] [+] EMBL CNS08KRH [ AGTCTAGG TAGGCTCCAAGGGAGC GCCGGACAAAGGCCCGGTCTCGACCTGTAGCTTTAAACTTACCTAGACGGCGGACGCAGTTCAGGAGGTATCACAGG CGGGAGGCGGCAGAACGCGACTCAACCGGCGTGGGATGGCGGCCTCAGGTAGGGCGGCGGGC] consensusID : consensus_7621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 99 fasta sequence [TAGGGAGGCCCCAAGGGAGCGCCGGACAAAGGCCCGGGCCCGACCTGAGCCAAAAACAAACCAAGACGGCGGACGCAGTTCAGGAGGCACCACAGGCGG] [+] EMBL CNS08X0R [TAGGGAGGCCCCAAGGGAGCGCCGGACAAAGGCCCGGGCCCGACCTGAGCCAAAAACAAACCAAGACGGCGGACGCAGTTCAGGAGGCACCACAGGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7621#0 GTTTTTCAGAGCTTGGATCTGTAACGGCGCAGAACAGAAAACGAAACAAAGACGTAGAGT 60 consensus_7621#1 ------------------------------------------------------------ consensus_7621#0 TGAGCAAGCAGGGTCAGGCAAAGCGTGGAGAGCCGGCTGAGTCTAGGTAGGCTCCAAGGG 120 consensus_7621#1 -------------------------------------------TAGGGAGGCCCCAAGGG 17 **** **** ******* consensus_7621#0 AGCGCCGGACAAAGGCCCGGTCTCGACCTGAGCTTTAAACTTACCTAGACGGCGGACGCA 180 consensus_7621#1 AGCGCCGGACAAAGGCCCGGGCCCGACCTGAGCCAAAAACAAACCAAGACGGCGGACGCA 77 ******************** * ********** **** *** ************** consensus_7621#0 GTTCAGGAGGCACCACAGGCGGGAGGCGGCAGAACGCGACTCAACCGGCGTGGATGGCGG 240 consensus_7621#1 GTTCAGGAGGCACCACAGGCGG-------------------------------------- 99 ********************** consensus_7621#0 CCTCAGGTAGGGCGGCGGGC 260 consensus_7621#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||