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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7625#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1498 fasta sequence
[CCGGCTCGATCATTGCATAGTATGTCCCTGCCGAGAAGACTGTCCAGTGCTTTCACACCGCTGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCATTTCAATAAAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAACTCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGCAACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGTTCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAGGACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCCTTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCGCAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGGTTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCGCGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTCCAGAACAAGGGCGGCAAGGAGGTGAGCTATGACGATTTGGCCGTTTTAATGCGCAAAATGCGCGAAGAGTGGAACGTTGCATCGATTTGTGACATTGTGCTGAACCACACGGCCAACGAGTCGATCTGGATTCGGGAGTATCCGGAGTGCAGCTACAATTGCTTCACCTGTCCGCATCTGCGGCCGGCCTTCCTGCTCGACGCAATGCTGGCCCGTGTCGGAGAGGACGTGAAGGACGGTATGCTGGCGCACGTTGGCGTGCCGGAGGTGGTCGAAACGGAGGATCATCTGCAGGCCATTCGTTGGCAGATCCATTCGAACTACTTGCCGCAGGTGAAGCTGTACGAGCTGTACCAGTGCGATGTGGACAAGTACGTGTCGCGGTTCAACGACGAGTGCAGCAAACGCAGCCCCAGCCGTGCGCAGGATATTCCCGAGGGCGATATAAAGCTGCGGATGGACCCGGAGCATCGCCGACTGGGTGCAGAGATCGACTTCGAACGTGCCATGAGCATCTACAACGTGTTCCGGCAGGACTGTTTCGATGAGGACAGTCGTAAGCGCAAGTGCACCGAGGTGTTCCGCGCTCGGTTGCAGTTCCTGAATGAAGAGGTGCGCCGGGAAATACAGGAACATCTGGACTACGCCATCGACAACTGTCTGGCCGGCACACGCTATGAACGTGTGCAGGGCGATGGACCCCAGGTGAAGGGCATATCGGTGAAGTACCCGCTGTTCATGAAGTACTTTACGCACTACGGAACGCAGGGTAAATCGCTCAAGGACATCG]
[+] EMBL BM630907 [CCGGCTCGATCATTGCATAGTATGTCCCTGCCGAGAAGACTGTCCAGTGCTTTCACACCGCTGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCATTTCAATAAAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAACTCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGCAACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGTTCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAGGACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCCTTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCGCAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGGTTCACTTTAC ]
[+] EMBL BM639639 [ ccgCTGTCCAGTGCTTTCACACCGCTGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCATTTCAATAAAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAACTCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGCAACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGTTCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAGGACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCCTTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCGCAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGGTTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCGCGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTCCAGAACAAGG ]
[+] EMBL BM631284 [ ccgGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGATTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCGCGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTCCAGAGCAAGGGCGGCAAGGAGGTGAGCTATGACGATTTGGCCGTTTTAATGCGCAAAATGCGCGAAGAGTGGAACGTTGCATCGATTTGTGACATTGTGCTGAACCACACGGCCAACGAGTCGATCTGGATTCGGGAGTATCCGGAGTGCAGCTACAATTGCTTCACCTGTCCGCATCTGCGGCCGGCCTTCCTGCTCGACGCAATGCTGGCCCGTGTCGGAGAGGACGTGAAGGACGGTATGCTGGCGCACGTTGGCGTG ]
[+] EMBL BM643467 [ ccgCTGGATTCGGGAGTATCCGGAGTGCAGCTACAATTGCTTCACCTGTCCGCATCTGCGGCCGGCCTTCCTGCTCGACGCAATGCTGGCCCGTGTCGGAGAGGACGTGAAGGACGGCATGTTGGCGCACGTTGGCGTGCCGGAGGTGGTCGAAACGGAGGATCATCTGCAGGCCATTCGTTGGCAGATCCATTCGAACTACTTGCCGCAGGTGAAGCTGTACGAGCTGTACCAGTGCGATGTGGACAAGTACGTGTCGCGGTTCAACGACGAGTGCAGCAAACGCAGCCCCAGCCGTGCGCAGGATATTCCCGAGGGCGATATAAAGCTGCGGATGGACCCGGAGCATCGCCGACTGGGTGCAGAGATCGACTTCGAACGTGCCATGAGCATCTACAACGTGTTCCGGCAGGACTGTTTCGATGAGGACAGTCGTAAGCGCAAGTGCACCGAGGTGTTCCGCGCTCGGTTGCAGTTCCTGAATGAAGAGGTGCGCCGGGAAATACAGGAACATCTGGACTACGCCATCGACAACTGTCTGGCCGGCACACGCTATGAACGTGTGCAGGGCGATGGACCCCAGGTGAAGGGCATATCGGTGAAGTACCCGCTGTTCATGAAGTACTTTACGCACTACGGAACGCAGGGTAAATCGCTCAAGGACATCG]
consensusID : consensus_7625#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 691 fasta sequence
[CCGAACAAAACTGATCAACAGCGGTCGGTTAAAGTTGTGGAAAAAGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCA-TTTCAATAAAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAACTCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGCAACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGTTCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAGGACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCCTTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCGCAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGGTTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCGCGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTC]
[+] EMBL BM656011 [CCGAACAAAACTGATCAACAGCGGTCGGTTAAAGTTGTGGAAAAAGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCA TTTCAATAAAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAACTCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGCAACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGTTCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAGGACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCCTTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCGCAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGGTTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCGCGCTCCGCCTACTCGCTGCGC ]
[+] EMBL BM631051 [ ccgGCGGTCGGTTAAAGTTGTGGAAAAAGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCA TTTCAATAAAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGGCTGAAGAAAAACTCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGCAACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGACTGGAATGGTGTTCGGCAGCGGGGTCACCGTTGGAAACGAGCGCGAGCGGATCCGATTACACCTCCATCAAGGATGTGGATTATTATTGCAATGTCCACTTTACCAAATCGGGAGCGTATCACTTTTATGCCTTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCGCAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGTCAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTGGGCAAGGAGTCGGGCTACAACATGATTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCGCGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTC]
[+] EMBL BM598256 [ cCGGTCGGTTAAAGTTGTGGAAAAAGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCATTTTCAATAAAGCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7625#0 CCGGCTCGATCATTGCATAGTATGTCCCTGCCGAGAAGACTGTCCAGTGCTTTCACACCG 60
consensus_7625#1 ---------------CCGAACAAAACTGATCAACAGCGGTCGGTTAAAGTTGTGGAAAAA 45
* * * * * * * * * * * *
consensus_7625#0 CTGAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCATTTCAATA 120
consensus_7625#1 --GAGTGCCATCGAAGAAGTCATCGAGTCAAGCGCCATGGCTGATGGGGTCATTTCAATA 103
**********************************************************
consensus_7625#0 AAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAAC 180
consensus_7625#1 AAGCTAGCCATACATGACAGCAACCAAGGGGATGGAGCTCTCTATCGACTGAAGAAAAAC 163
************************************************************
consensus_7625#0 TCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGC 240
consensus_7625#1 TCGCTGGTGCATGTGCATCCGGGTGCATCGCTTCTGGGACGCCGGGTTGCGCTTTACTGC 223
************************************************************
consensus_7625#0 AACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGT 300
consensus_7625#1 AACTACCCAGCGGATGATAAGGAGTTTTGCCGAAAGACCTACAGACGCCTAGAATGGTGT 283
************************************************************
consensus_7625#0 TCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAG 360
consensus_7625#1 TCGGCAGCGGGATCACCGTTGGAAACGAGCGCGAGCGGATCCGAATACACCTCCATCAAG 343
************************************************************
consensus_7625#0 GACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCC 420
consensus_7625#1 GACGTGGATTATTATTGCAATGTTCACTTTACCAAATCGGGAGCGTATCACTTTTATGCC 403
************************************************************
consensus_7625#0 TTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCG 480
consensus_7625#1 TTGTACGAAGAGTGTCCCGAGGCGGGGGCACAGGCTGGCCTGTACGTACAAATTGAGCCG 463
************************************************************
consensus_7625#0 CAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGT 540
consensus_7625#1 CAGCTGTCGGTTGGATCGGGAGAGGCCGCCACAACGCTGCCCCTCGATGCCATCCGCTGT 523
************************************************************
consensus_7625#0 CAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTG 600
consensus_7625#1 CAGACGGTGATTTCGAAGCTGCTCGGACCGTTGGACACGTGGGAGGCAAAGTTGCGCGTG 583
************************************************************
consensus_7625#0 GGCAAGGAGTCGGGCTACAACATGGTTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCG 660
consensus_7625#1 GGCAAGGAGTCGGGCTACAACATGGTTCACTTTACGCCCGTGCAAGAGCTGGGCGGATCG 643
************************************************************
consensus_7625#0 CGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTCCAGAACAAGGGC 720
consensus_7625#1 CGCTCCGCCTACTCGCTGCGCAACCAGCTCAAGGTGAATCCGGACTTC------------ 691
************************************************
consensus_7625#0 GGCAAGGAGGTGAGCTATGACGATTTGGCCGTTTTAATGCGCAAAATGCGCGAAGAGTGG 780
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 AACGTTGCATCGATTTGTGACATTGTGCTGAACCACACGGCCAACGAGTCGATCTGGATT 840
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 CGGGAGTATCCGGAGTGCAGCTACAATTGCTTCACCTGTCCGCATCTGCGGCCGGCCTTC 900
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 CTGCTCGACGCAATGCTGGCCCGTGTCGGAGAGGACGTGAAGGACGGTATGCTGGCGCAC 960
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 GTTGGCGTGCCGGAGGTGGTCGAAACGGAGGATCATCTGCAGGCCATTCGTTGGCAGATC 1020
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 CATTCGAACTACTTGCCGCAGGTGAAGCTGTACGAGCTGTACCAGTGCGATGTGGACAAG 1080
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 TACGTGTCGCGGTTCAACGACGAGTGCAGCAAACGCAGCCCCAGCCGTGCGCAGGATATT 1140
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 CCCGAGGGCGATATAAAGCTGCGGATGGACCCGGAGCATCGCCGACTGGGTGCAGAGATC 1200
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 GACTTCGAACGTGCCATGAGCATCTACAACGTGTTCCGGCAGGACTGTTTCGATGAGGAC 1260
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 AGTCGTAAGCGCAAGTGCACCGAGGTGTTCCGCGCTCGGTTGCAGTTCCTGAATGAAGAG 1320
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 GTGCGCCGGGAAATACAGGAACATCTGGACTACGCCATCGACAACTGTCTGGCCGGCACA 1380
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 CGCTATGAACGTGTGCAGGGCGATGGACCCCAGGTGAAGGGCATATCGGTGAAGTACCCG 1440
consensus_7625#1 ------------------------------------------------------------
consensus_7625#0 CTGTTCATGAAGTACTTTACGCACTACGGAACGCAGGGTAAATCGCTCAAGGACATCG 1498
consensus_7625#1 ----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||