These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_766#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence [CGAGGTAAAGCTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGACGTGCAGCCGCGGGCGTTCATCGAGGAGCTGCTGCGCAGCTCCGCTAATGGGCTTCCGGTGCTGTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTACTTAATCGGGTGGAAAACTGTTCCGGCTTGCGGGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTGGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGATAAGCAGAGTCTCAACGCAAGCCTGGTCGGCACGGTGGAGTACATTGCGCCGGATCTCATCTACTGTGATCGATACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCAGGATTGGTGACGGGCGTGCGGCCCTTTATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAGAAATCGGCCGACATTGCGATCACGGAGGACAATCGGGAAAACTACACCTACCACACGGAGATATTTGCGGAAAACCATATTTCCACCTGCTTGCGCAAGCAGCTGGAA] [+] EMBL BM631479 [CGAGGTAAAGCTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGACGTGCAGCCGCGGGCGTTCATCGAGGAGCTGCTGCGCAGCTCCGCTAATGGGCTTCCGGTGCTGTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTACTTAATCGGGTGGAAAACTGTTCCGGCTTGCGGGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTGGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGATAAGCAGAGTCTCAACGCAAGCCTGGTCGGCACGGTGGAGTACATTGCGCCGGATCTCATCTACTGTGATCGATACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCAGGATTGGTGACGGGCGTGCGGCCCTTTATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAGAAATCGGCCGACATTGCGATCACGGAGGACAATCGGGAAAACTACACCTACCACACGGAGATATTTGCGGAAAACCATATTTCCACCTGCTTGCGCAAGCAGCTGGAA] consensusID : consensus_766#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence [CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGTAGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGCAAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATATAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGCACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCGAGATTGTGACGGGCGTGCGGCCCTTCATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT] [+] EMBL BM618262 [CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGTAGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGCAAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATATAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGACGTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGGGATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTAACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGCACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGACTACTGGTCGATGGGCGTGATCGGGTTCGAGATTGTGACGGGCGTGCGGCCCTTCATACCGCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_766#0 -CGAGGTAAAG--CTGATGACGGAAACGGTCCAGAACGATCACATCGTGCGCACGGTGGA 57 consensus_766#1 CCGGGGAAAAATACCATTCGCTTTATTTATAGAACGCAATAAAAAGCTTTGCCTGAGGGT 60 ** ** *** * * * * * * * ** * * * ** * ** consensus_766#0 CGTGCAG-------CCGCGGGCGTTCATCGAGGAGCTGC-TGC-GCAGCTCCGCTAATGG 108 consensus_766#1 AGTGTGTACCATTTCCGCTCACAATCGCTGCAAACTCGTGTGCTGCAGCAACGCGAACGC 120 *** **** * ** * * * *** ***** *** ** * consensus_766#0 GCTTCCGGTGCTGTGCATGGAGTACTGTGAGGTGGTGATCTGCGGCGCGTA--CTTAATC 166 consensus_766#1 AAGATCGCCCGCCCGATCGGTAGACAGTGTAAAGGGGATGTACGGTGAATAGGTTAAATA 180 ** * ** ** *** ** *** * *** * ** * *** consensus_766#0 GGGTGGAAA-------ACTGTTCCGGCTTGC---------GGGAGCAGGACGTGCGGGAC 210 consensus_766#1 TAGCTAATGCGGCTGCATTCCTCCGGCAAATTAGAACACAGTGAGCAGGACGTGCGGGAC 240 * * * * ****** * ****************** consensus_766#0 GTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGG 270 consensus_766#1 GTGTTGCGCTCGCTGCGTAGTGCCATTGCGTACCTGCACAGTCTAAAAATAACGCACCGG 300 ************************************************************ consensus_766#0 GATATAAAGCCGGAAAATTTGGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTA 330 consensus_766#1 GATATAAAGCCGGAAAATTTAGTGCTGAAGCAGCACGGGGATCGGTTTATCTATAAGCTA 360 ******************** *************************************** consensus_766#0 ACAGATCTCGGTTACGCCAAAGCGCTGGATAAGCAGAGTCTCAACGCAAGCCTGGTCGGC 390 consensus_766#1 ACAGATCTCGGTTACGCCAAAGCGCTGGACAAGCAGAGTCTCAACGCAAGTCTGGTCGGC 420 ***************************** ******************** ********* consensus_766#0 ACGGTGGAGTACATTGCGCCGGATCTCATCTACTGTGATCGATACAACTGCTCGGTCGAC 450 consensus_766#1 ACGGTGGAGTACATTGCGCCGGACCTCATCTACTGTGATCGGTACAACTGCTCGGTCGAC 480 *********************** ***************** ****************** consensus_766#0 TACTGGTCGATGGGCGTGATCGGGTTCAGGATTGGTGACGGGCGTGCGGCCCTTTATACC 510 consensus_766#1 TACTGGTCGATGGGCGTGATCGGGTTCGAGATTG-TGACGGGCGTGCGGCCCTTCATACC 539 *************************** ***** ******************* ***** consensus_766#0 GCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAGAAA-TCGGCCGACATTG 569 consensus_766#1 GCACGCACCGATCACGCGCTGGATGATGCACGTGCAGCAGAAAAAAATCGGCCGACATT- 598 ****************************************** *** ************ consensus_766#0 CGATCACGGAGGACAATCGGGAAAACTACACCTACCACACGGAGATATTTGCGGAAAACC 629 consensus_766#1 ------------------------------------------------------------ consensus_766#0 ATATTTCCACCTGCTTGCGCAAGCAGCTGGAA 661 consensus_766#1 -------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||