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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7700#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1134 fasta sequence
[TTTTTGTTAGATACGCTGCGAATATACGTTTTTTTTTATTATTGCATTTCTGTTATGAGTATGCGTTGCGTTCCTTTGAAAAAGTGTTGAAGTCCAAAACGAAAATAAAAACAAAAATAAGCTAGAACAAGTTTATATGGGTGTGTATGGATGCTTCGATATAAATGTGCTGTGTCCTGTGCTACTGAAACTGAATGCACAACAACCTCAACTCACTAGGCAAAAAGCCGAGCTGATTTCTGACCGACTTTTGCTGCAGTTGCTACAGTTCCCCCGTTCTCTCGCTACACGTTTGCGTTAGTCCTACCGAAAGCACCGCTGATTTGTTTGAACAGGTTGGCATTATTATCAAGCCACAACAATCATTCAGGAAGGCACACGTTTTCTTCTTTTCAACGCTTCGTTTATATCGCCTTGCCGCCCGGCCCGCTGGCCCCCTGGTTCTATCCACCCCTTCGTTCACGCACCGTGCCGGATGATGAGCATCAACATTTACTAAAAGGCTAGGCATTGCAATCGTGGTTTTGTTTACCGAGAGAGACTCCCTCCCCCTGTTC-T-CCCTCTGGTGATGGTGGTGGTGCTGGTGTGTACAGCACACTTTTCCACCCCGATGTAACAAGGTGTCAAAACCGGTGCGCGCGCGAGGGGTGAAAATTCACAATCATCTCCAACGCGGCACCGACGGACACGCAACTCCTCCCCTCTTCTAGGCCACCTTTTCTCCAACACCGAGTGAATTCATAACTACACTGCACACGGACATTAAGGTTAGTTAGCATACAAAGGCAAGCGGGTCGACGAGAATCATCACCATCATTTTGAGTTTTAACGGGATTTTAGTTTTTTGTCTTGTTTTGTTGCTTTATGCTTTCTTTTTCTTTTTCTTGGGCAAACGCAATGACCACCATCCCCCCATTGAAACATTCCGACACCCGGGGGATCGTCGTGTCCAGCTACTAAAGTAAGCTACCTTTATCCACGGTACACAATCACTTTCTTAGCGCTTCCATCATCATCGTGGAAAATGGTTTTTATTTAAACGGAAAAAATAACTCACAATGCGAAAAATGTTTTCTCCCAAAGACAGGCGGCGACCACCATTTTTAGCCGAACAGTTCATTTACCTCGGGCGAT]
[+] EMBL AGA284411 [TTTTTGTTAGATACGCTGCGAATATACGTTTTTTTTTATTATTGCATTTCTGTTATGAGTATGCGTTGCGTTCCTTTGAAAAAGTGTTGAAGTCCAAAACGAAAATAAAAACAAAAATAAGCTAGAACAAGTTTATATGGGTGTGTATGGATGCTTCGATATAAATGTGCTGTGTCCTGTGCTACTGAAACTGAATGCACAACAACCTCAACTCACTAGGCAAAAAGCCGAGCTGATTTCTGACCGACTTTTGCTGCAGTTGCTACAGTTCCCCCGTTCTCTCGCTACACGTTTGCGTTAGTCCTACCGAAAGCACCGCTGATTTGTTT ]
[-] EMBL BX621365 [ ATTTCTGACCGACTTTTGCTGCAGTTGCTACAGTTCTCCCGTTCTCTCGCTACACGTTTGCGTTAGTCCTACCGAAAGCACCGCTGATTTGTTTGAACAGGTTGGCATTATTATCAAGCCACAACAATCATTCAGGAAGGCACACGTTTTCTTCTTTTCAACGCTTCGTTTATATCGCCTTGCCGCCCGGCCCGCTGGCCCCCTGGTTCTATCCACCCCTTCGTTCACGCACCGTGCCGGATGATGAGCATCAACATTTACTAAAAGGCTAGGCATTGCAATCGTGGTTTTGTTTACCGAGAGAGACTCCCTCCCCCTGTTC T CCCTCTGGTGATGGTGGTGGTGCTGGTGTGTACAGCACACTTTTCCACCCCGATGTAACAAGGTGTCAAAACCGGTGCGCGCGCGAGGGGTGAAAATTCACAATCATCTCCAACGCGGCACCGACGGACACGCAACTCCTCCCCTCTTCTAGGCCACCTTTTCTCCAACACCGAGTGAATTCATAACTACACTGCACACGGACATTAAGGTTAGTTAGCATACAAAGGCAAGCGGGTCGACGAGAATCATCACCATCATTTTGAGTTTTAACGGGATTTTAGTTTTTTGTCTTGTTTTGTTGCTTTATGCTTTCTTTTTCTTTTTCTTGGGCAAA ]
[-] EMBL AL931887 [ TGATGAGCA CAACATTTACTAAAAGGCTAGGCATTGCAATCGTGGTTTTGTTTACCGAGAGAGACTCCCTCCCCCTGTTCGTGCCCTCTGGTGATGGTGGTGGTGCTGGTGTGTACAGCACACTTTTCCACCCCGATGTAACAAGGTGTCAAAACCGGTGCGCGCGCGAGGGGTGAAAATTCACAATCATCTCCAACGCGGCACCGACGGACACGCAACTCCTCCCCTCTTCTAGGCCACCTTTTCTCCAACACCGAGTGAATTCATAACTACACTGCACACGGACATTAAGGTTAGTTAGCATACAAAGGCAAGCGGGTCGACGAGAATCATCACCATCATTTTGAGTTTTAACGGGATTTTAGTTTTTTGTCTTGTTTTGTTGCTTTATGCTTTCTTTTTCTTTTTCTTGGGCAAACGCAATGACCACCATCCCCCCATTGAAACATTCCGACACCCGGGGGATCGTCGTGTCCAGCTACTAAAGTAAGCTACCTTTATCCACGGTACACAATCACTTTCTTAGCGCTTCCATCATCATCGTGGAAAATGGTTTTTATTTAAACGGAAAAAATAACTCACAATGCGAAAAATGTTTTCTCCCAAAGACAGGCGGCGACCACCATTTTTAGCCGAACAGTTCATTTACCTCGGGCGAT]
[-] EMBL AGA285717 [ ACACCGAGTGAATTCATAANTACACTGCACACGGACATTAAGGTTAGTTAGCATACAAAGGCAAGCGGGTCGACGAGAATCATCACCATCATTTTGAGTTTTAACGGGATTTTAGTTTTTTGTCTTGTTTTGTTGCTTTATGCTTTCTTTTTCTTTTTCTTGGGCAAACGCAATGACCACCATCCCCCCATTGAAACATTCCGACACCCGGGGGATCGTCGTGTCCAGCTACTAAAGTAAGCTACCTTTATCCACGGTACACAATCACTTTCTTAGCGCTTCCATCATCATCGTGGAAAAa ]
consensusID : consensus_7700#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1082 fasta sequence
[CCGGAAAGATAGGAGCGAGGCAAAAACATCCGTGGAACGAGCTCCTTCGAGAAAAAGGGAACAAGAACCCAACTGGAAGGGACACTTCGTTCTCCACGATAGACTGTGTGTGTGTGTGCGAGTATGTGCTTGTATGATTGTATGTGGATTGAGTGTGGCACAAAAAAAATGTGAGGAAAAACGAAACCGAACCGAACCACATTGTGCATTGGAAAGGGAGAGGGGAGAATGAACGGTCAAAGGGTCCAGAACTGGCAGCGAAAGGAAACAGAAAAGAGGATAGGAAGGATAGAGTCGATAAAAGGGGCATGATGGTGAAGCATGGGGGTATTACTACACTACTAACACATTGCTGCAGCCACACTTGGAGCTGGTTACGCTGGAGAGAGGACAAGAACAACAACAACAAAAACTATCAAGATCTTGTTTTCGTTTTTACATTAAACTATTCTTTTCTCGGCCCATGAGTCATAACATCTTGCACTTGTCTCCGGCGAACCAGTTCTCTCCTCGGTGCTAGAGAGTTCTGGTAGCGAATGTCGAGAATCATCATCACGTATCCAGGGGCTCGTACAGGAGTGTGCGAGAGTGTGTTTTTTTAAATCGTTCTACAATACATCACAAACAAGAAATTAAAAAAAAAGAATGACGAAACATTGTATGTCACGTAGGCACACATGTATGAGCTGGTAAATACTGATGCAACACTAACGTCCGGCAGCGCCTAAATTGATCACCCCAAAATAATAGCTAGAATTAAAAGTTTACTCAGAACCTCTGTTCTTGCCACCCTTATCATTTGTTTCTCTTATCAAGAGTCTTCCAACAAACAAATTATGTATCGAATTTCGAGGACAGAGTCTCCAAAGCTCTCCGTCGGCCTACATCTTGCCAAAATTGATGAATATGAAAAGAAAGAGTAGATCTTTAACGACCAAGTCCGTCAAGTCCCATTTATTATGTTTCTTTTGTAAAGCGGTGCGGTTTTCGCTCACGCAACAATGTGAACTATCCGGCTAAAAATGGTGGTTCGCCGCCTGTCTTTGTGAGAAAACATTTTTCGCATTGTGAGTTATTTTTTT]
[+] EMBL BM623860 [CCGGAAAGATAGGAGCGAGGCAAAAACATCCGTGGAACGAGCTCCTTCGAGAAAAAGGGAACAAGAACCCAACTGGAAGGGACACTTCGTTCTCCACGATAGACTGTGTGTGTGTGTGCGAGTATGTGCTTGTATGATTGTATGTGGATTGAGTGTGGCAC AAAAAAATGTGAGGAAAAACGAAACCGAACCGAACCACATTGTGCATTGGAAAGGGAGAGGGGAGAATGAACGGTCAAAGGGTCCAGAACTGGCAGCGAAAGGAAACAGAAAAGAGGATAGGAAGGATAGAGTCGATAAAAGGGGCATGATGGTGAAGCATGGGGGTATTACTACACTACTAACACATTGCTGCAGCCACACTTGGAGCTGGTTACGCTGGAGAGAGGACAAGAACAACAACAACAAAAACTATCAAGATCTTGTTTTCGTTTTTACATTAAACTATTCTTTTCTCGGCCCATGAGTCATAACATCTTGCACTTGTCTCCGGCGAACCAGTTCTCTCCTCGGTGCTAGAGAGTTCTGGTAGCGAATGTCGAGAATCATCATCACGTATCCAGGGGCTCGTACAGGAGTGTGCGAGAGTGTGTTTTTTTAAATCGTTCTACAATACATCA ]
[+] EMBL BM654754 [ ccgTAGGAGCGAGGCAAAAACATCCGTGGAACGAGCTCCTTCGAGAAAAAGGGAACAAGAACCCAACTGGAAGGGACACTTCGTTCTCCACGATAGACTGTGTGTGTGTGTGCGAGTATGTGCTTGTATGATTGTATGTGGATTGAGTGTGGCACAAAAAAAATGTGAGGAAAAACGAAACCGAACCGAACCACATTGTGCATTGGAAAGGGAGAGGGGAGAATGAACGGTCAAAGGGTCCAGAACTGGCAGCGAAAGGAAACAGAAAAGAGGATAGGAAGGATAGAGTCGATAAAAGGGGCATGATGGTGAAGCATGGGGGTATTACTACACTACTAACACATTGCTGCAGCCACACTTGGAGCTGGTTACGCTGGAGAGAGGACAAGAACAACAACAACAAAAACTATCAAGATCTTGTTTTCGTTTTTACATTAAACTATTCTTTTCTCGGCCCATGAGTCATAACATCTTGCACTTGTCTCCGGCGAACCAGTTCTCTCCTCGGTGCTAGAGAGTTCTGGTAGCGAATGTCGAGAATCATCATCACGTATCCAGGGGCTCGTACAGGAGTGTGCGAGAGTGTGTTTTTTTAAATCGTTCTACAATACATCACAAACAAGAAATTAAAAAAAAAGAATGACGAAACATTGTATGTCACGTAGGCACACATGTA ]
[+] EMBL BX628392 [ AGCGAGGCAAAAACATCCGTGGAACGAGCTCCTTCGAGAAAAAGGGAACAAGAACCCAACTGGAAGGGACACTTCGTTCTCCACGATAGACTGTGTGTGTGTGTGCGAGTATGTGCTTGTATGATTGTATGTGGATTGAGTGTGGCACAAAAAAAATGTGAGGAAAAACGAAACCGAACCGAACCACATTGTGCATTGGAAAGGGAGAGGGGAGAATGAACGGTCAAAGGGTCCAGAACTGGCAGCAAAAGGAAACAGAAAAGAGGATAGGAAGGATAGAGTCGATAAAAGGGGCATGATGGTGAAGCATGGGGGTATTACTACACTACTAACACATTGCTGCAGCCACACTTGGAGCTGGTTACGCTGGAGAGAGGACAAGAACAACAACAACAAAAACTATCAAGATCTTGTTTTCGTTTTTACATTAAACTATTCTTTTCTCGGCCCATGAGTCATAACATCTTGCACTTGTCTCCGGCGAACCAGTTCTCTCCTCGGTGCTAGAGAGTTCTGGTAGCGAATGTCGAGAATCATCATCACGTATCCAGGGGCTCGTACAGGAGTGTGCGAGAGTGTGTTTTTTTAAATCGTTCTACAATACA ]
[+] EMBL BM580494 [ ccgCCAGTTCTCTCCTCGGTGCTAGAGAGTGCTGGTAGCGAATGTCGAGAATCATCATCACGTATCCAGGGGCTTGTACAGGAGTGTGCGAGAGTGTGTTTTATTAAATCGTTCTA AATACATCACAAACGAGAAATTAAAAAAAAAGAATGACGAAACA TGTATGTCACGTAGGCACACATGTATGAGCTGGTAAATACTGATGCAACACTAACGTCCGGCAGCGCCTAAATTGATCACCCCAAAATAATAGCTAGAATTAAAAGTTTACTCAGAACCTCTGTTCTTGCCACCCTTATCATTTGTTTCTCTTATCAAGAGTCTTCCAACAAACAAATTATGTATCGAATTTCGAGGACAGAGTCTCCAAAGCTCTCCGTCGGCCTACATCTTGCCAAAATTGATGAATATGAAAAGAAAGAGTAGATCTTTAACGACCAAGTCCGTCAAGTCCCATTTATTATGTTTCTTTTGTAAAGCGGTGCGGTTTTCGCTCACGCAACAATGTGAACTATCCGGCTAAAAATGGTGGTTCGCCGCCTGTCTTTGTGAGAAAACATTTTTCGCATTGTGAGTTATTTTTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7700#0 TTTTTGTTAGATACGCTGCGAATATACGTTTTTTTTTATTATTGCATTTCTGTTATGAGT 60
consensus_7700#1 --CCGGAAAGATAGGAGCGAGGCAAAAACATCCGTGGAACGAGCTCCTTCGAGAAAAAGG 58
* ***** * * * * * * *** * **
consensus_7700#0 ATGCGTTGCGTTCCTTTGAAAAAGTGTTGAAGTCCAAAACGAAAATAAAAACAAAAATAA 120
consensus_7700#1 GAACAA-GAACCCAACTGGAAGGGACACTTCGTTCTCCACGATAGACTGTGTGTGTGTGT 117
* * * ** ** * ** * **** * *
consensus_7700#0 GCTAGAACAAGTTTATATGGGTGTGTATGGAT--GCTTCGATATAAATGTGCTGTGTCCT 178
consensus_7700#1 GCGAGTATGTGCTTGTATGATTGTATGTGGATTGAGTGTGGCACAAAAAAAATGTGA--- 174
** ** * * ** **** *** * ***** * * * *** ****
consensus_7700#0 GTGCTACTGAAACTGAATGCACAACAACCTCAACTCACTAGGCAAAAAGCCGAGCTGATT 238
consensus_7700#1 GGAAAAACGAAACCGAA--CCGAACCACATTG-TGCATTGGAAAGGGAGAGGGGAGAATG 231
* * ***** *** * *** ** * ** * * * ** * * **
consensus_7700#0 TCTGACCGACTTTTGCTGCAGTTGCTACAGTTCCCCCGTTCTCTCGCTACACGTTTGCGT 298
consensus_7700#1 AACGGTCAAAGGGTCCAGAACTGGCAGCGAA-----AGGAAACAGAAAAGAGGATAGGAA 286
* * * * * * * * ** * * * * * * * *
consensus_7700#0 TAGTCCTACCGAAAGCACCGCTGATTTGTTTGAACAGGTTGGCATTATTATCAAGCCACA 358
consensus_7700#1 GGATAGAGTCGATAAAAGGGGCATGATGGTGAAGCATGGGGGTATTACTACACTACT--A 344
* *** * * * ** * * ** * ** **** ** * *
consensus_7700#0 ACAATCATTCAGGAAGGCACACGTTTTCTTCTTTTCAACGCTTCGTTTATATCGCCTTGC 418
consensus_7700#1 ACA--CATTGCTGCAGCCACAC------------TTGGAGCT--GGTTACGCTGGAGAGA 388
*** **** * ** ***** * *** * *** * *
consensus_7700#0 CGCCCGGCCCGCTGGCCCCCTGGTTCTATCCACCCCTTCGTTCACGCACCGTGCCGGATG 478
consensus_7700#1 GGACAAGAACAACAACAACAAAAA-CTATCAAGATCTT-GTTTTCGT----TTTTACATT 442
* * * * * * ***** * *** *** ** * **
consensus_7700#0 ATGAGCATCAACATTTACTAAAAGGCTAGGCATTGCAATCGTGGTTTTGTTTACCGAGAG 538
consensus_7700#1 A-AACTATT--CTTTTCTCGGCCCATGAGTCATAACA-TCTTGCACTTGTCTCCGGCGAA 498
* * ** * *** ** *** ** ** ** **** * * * **
consensus_7700#0 AGACTCCCTCCCCCTGTTCTCCCTCTGGTGATGGTGGTGG-TGCTGGTGTGTA-CAGCAC 596
consensus_7700#1 CCAGTTCTCTCCTCGGTGCTAGAG--AGTTCTGGTAGCGAATGTCGAGAATCATCATCAC 556
* * * ** * ** ** ** **** * * ** * * ** ***
consensus_7700#0 ACTTTTCCACCCCGATGTAACAAGGTGTCAAAACCGGTGCGCGCGCGAGGGGTGAAAATT 656
consensus_7700#1 GTATCCAGGGGCTCGTACAGGAGTGTGCGAGAGTGTGTTTTTTTAAATCGTTCTACAATA 616
* * * * * *** * * ** * * ***
consensus_7700#0 CACAATCATCTCCAACGCGGCACCGACGGAC-ACGCAACTCCTCCCCTCTTCTAGGCCAC 715
consensus_7700#1 CATCACAAACAAGAAATTAAAAAAAAAGAATGACGAAACATTGTATGTCACGTAGGCACA 676
** * * * ** * * * * *** *** ** *****
consensus_7700#0 CTTTTCTCCAACACCGAGTGAATTCATAACTACACTGCACACGGACATTAAGGTTAGTTA 775
consensus_7700#1 CATGTATGAGCTGGTAAATACTGATGCAACACTAACGTCCGGCAGCGCCTAAATTGATCA 736
* * * * * * *** * * * * * ** * *
consensus_7700#0 GCATACAAAGGCAAGCGGGTCGACGAGAATCATCACCATCATTTTGAGTTTTAACGGGAT 835
consensus_7700#1 CCCCAAAATAATAGCTAG---AATTAAAAGTTTACTCAGAACCTCTGTTCTTGCCACCCT 793
* * ** * * * * ** * ** * * * ** * *
consensus_7700#0 TTTAGTTT-TTTGTCTTGTTTTGTTGCTTTATGCTTTCTTTTTCTTTTTC---TTGGGCA 891
consensus_7700#1 TATCATTTGTTTCTCTTATCAAGAGTCTTCCAACAAACAAATTATGTATCGAATTTCGAG 853
* * *** *** **** * * *** * * ** * * ** ** *
consensus_7700#0 AACGCAATGACCACCATCCCCCCATTGAAACATTCCGACACCCGGGGGATCGTCGTGTCC 951
consensus_7700#1 GACAGAGTCTCCAA-AGCTCTCCGTCGG------CCTACATCTTGCCAAAATTGATGAAT 906
** * * *** * * * ** * * ** *** * * * * **
consensus_7700#0 AGCTACTAAAGTAAGCTACCTTTATCCAC--GGTACAC--AATCACTTTCTTAGCGCTTC 1007
consensus_7700#1 ATGAAAAGAAAGAGTAGATCTTTAACGACCAAGTCCGTCAAGTCCCATTTATTATGTTTC 966
* * ** * * ***** * ** ** * * ** * ** * * ***
consensus_7700#0 CATCATCATCGTGGAAAATGGTTTTTATTTAAACGGAAAAAATAACTCACAATGCGAAAA 1067
consensus_7700#1 TTTTGTAA---AGCGGTGCGGTTTTCGCTCACGCAACAATGTGAACTATCCGGCTAAAAA 1023
* * * * ****** * * * ** **** * ****
consensus_7700#0 ATGTTTTCTCCCAAAGACAGGCGGCGACCACCATTTTTAGCCGAACAGTTCATTTACCTC 1127
consensus_7700#1 TGGTGGTTCGCCGCCTGTCTTTGTGAGAAAACATTTTTCGCATTGTGAGTTATTTTTTT- 1082
** * ** * * ******* ** * **** *
consensus_7700#0 GGGCGAT 1134
consensus_7700#1 -------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||