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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7722#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1289 fasta sequence
[ACTCAACACCGATCGGAAGTTAAGTAGGCGAGCTTGGTTGGGGCAGCGTCGATCCACAATAGCACCACAACACGTGGCGGAGGAGTTCGAACGTTCCACCAGTTTTTGTTTTATATGTACTTTGTTGTTCTGTTGTGTTGTGGCTTAAATGCTTCCTCTGTGCTATTTTTGTTTGAGTTATAATTTTAACAACTATTGTTAGAGGTTTAGTCCGTAATCGTGGGAAAACGGCACCACCGTGGGAGTGTGTGTGTGTCTGCGACGAACGATAAAATCAAAGCCCAGATGGGGGCAGTGGGGAAAGTCGTTTTCCACACTCGAGTTCTGGTAGAAGTGTTAGGAGTAAGTTACTTAAGCATAAGTTAATAAATTGATCGATTTACCGATCTCTCTTCCAGAAACTAGTTAAGATTTTGCGTTCGTCTCGTTCACCCCTTTCCACTACATTTCCTTCGGCAGTTCCTTGTTCCTACAGCCTGAACCATTTCGGTTAAGAATTTCGTGATTGGGACTACAAAAAATGGAGAAAATATGAATGTATGAATAATAACGGAATGGTGTATAAAGAAAAGTTTAACGAAAGATGTAACATAACGGATGAATGGAGCTTTCTGTAACAAATCCTTTGGCTAGTAACCAAAAAACAGTTTGTTGGATGAAAAGAAATATGAGAAACGATGAAACCTTCCGGCGATCCAGAGCTTTCGTTTACCACCGGAAGGAACTGGCTACAATCACAGGTAAGTGCAGCGTGTGGCAGCCGC------CTCTCTCTCTCTCTCCATACACACCACCCACCGTACCTGCACTGCTTCCTCACACTCCCCGCACTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCCTGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCACCAGTCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCACGCCGGCCGCTTCCCGTCCACCGGCAAACTTGACCCGTATCGTCTTCTCCAGATATTTGCTCAGATCGAGGATGGATTCCTTTCGTCGCTTTTCTTTATTGTCGCCTCCGCCGCCG---CCACCACCACTTCCACCACCACCAGTCGAATTGCCGGATGCCGCTGGCTTCTTATCCGACATGATGCCAATCGAATGTAAAATACACCAGAACTTCTATCAGCGCTGAAACTGCAACGATTCGAAGGGGTTTGTTTACAACAGGCG]
[+] EMBL CNS09IZQ [ACTCAACACCGATCGGAAGTTAAGTAGGCGAGCTTGGTTGGGGCAGCGTCGATCCACAATAGCACCACAACACGTGGCGGAGGAGTTCGAACGTTCCACCAGTTTTTGTTTTATATGTACTTTGTTGTTCTGTTGTGTTGTGGCTTAAATGCTTCCTCTGTGCTATTTTTGTTTGAGTTATAATTTTAACAACTATTGTTAGAGGTTTAGTCCGTAATCGTGGGAAAACGGCACCACCGTGGGAGTGTGTGTGTGTCTGCGACGAACGATAAAATCAAAGCCCAGATGGGGGCAGTGGGGAAAGTCGTTTTCCACACTCGAGTTCTGGTAGAAGTGTTAGGAGTAAGTTACTTAAGCATAAGTTAATAAATTGATCGATTTACCGATCTCTCTTCCAGAAACTAGTTAAGATTTTGCGTTCGTCTCGTTCACCCCTTTCCACTACATTTCCTTCGGCAGTTCCTTGTTCCTACAGCCTGAACCATTTCGGTTAAGAATTTCGTGATTGGGACTACAAAAAATGGAGAAAATATGAATGTATGAATAATAACGGAATGGTGTATAAAGAAAAGTTTAACGAAAGATGTAACATAACGGATGAATGGAGCTTTCTGTAACAAATCCTTTGGCTAGTAACCAAAAAACAGTTTGTTGGATGAAAAGAAATATGAGAAACGATGAAACCTTCCGGCGATCCAGAGCTTTCGTTTACCACCGGAAGGAACTGACTACAATCACAGGTAAGTGCAGCGTGTGGCAGCCGC CTCTCTCTCTCTCTCCATACACACCACCCACCGTACCTGCACTGCTTCCTCACACTCCCCGCACTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCCTGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCA ]
[-] EMBL BX610390 [ TGTGTGTG GTCTGCGACGAACGATAAAATCAAAGCCAAGACGGGGGCAGTGTGGATAGTCGTTTGCCACACTCGAGTTCTGGTAGAAGTGTTAGGAGTAAGTTACTTAAGCATAAGTTAATAAATTGATCGATTTACCGATCTCTCTTCCAGAAACTAGTTAAGATTTTGCGTTCGTCTCGTTCACCCCTTTCCACTACATTTCCTTTGGCAGTTCCTTGTTCCTACAACCTGGACCATTTCGGTTAAGAATTTCGTGATTGGGACTACAAAAAATGCAGAAAATATGAATGTATGAATAATAACGGAATGGTGTATAAAGAAAAGTGTAACGAAAGATGTAACATAACGGATGAATGGAGCTTTCTGTAACAAATCCTTTGGCTAGTAACCAAAAAACAGTTTGTTGGATGAAAAGAACGATGAGAAACGATGAAACCTTCCGGCGATCCAGAGCTTTCGTTTACCACCGGAAGGAACTGGCTACAATCACAGGTAAGTGCAGCGAGTGGCAGCCGC CTCTCTCCATACACACCACCCACCGTACCCGCACTGCTTCCTCACACTCCCCGCACTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCCTGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCACCAGTCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGC ]
[-] EMBL CNS09IZP [ CGATTTACCGATCTCTCTTCCAGAAACTAGTTAAGATTTTGCGTTCGTCTCGTTCACCCCTTTCCACTACATTTCCTTCGGCAGTTCCTTGTTCCTACAGCCTGAACCATTTCGGTTAAGAATTTCGTGATTGGGACTACAAAAAATGGAGAAAATATGAATGTATGAATAATAACGGAATGGTGTATAAAGAAAAGTTTAACGAAAGATGTAACATAACGGATGAATGGAGCTTTCTGTAACAAATCCTTTGGCTAGTAACCAAAAAACAGTTTGTTGGATGAAAAGAAATATGAGAAACGATGAAACCTTCCGGCGATCCAGAGCTTTCGTTTACCACCGGAAGGAACTGACTACAATCACAGGTAAGTGCAGCGTGTGGCAGCCGC CTCTCTCTCTCTCTCCATACACACCACCCACCGTACCTGCACTGCTTCCTCACACTCCCCGCACTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCAT CTGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCACCAGCCCCAGGCGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCACGCCGGCCGCTTCCCGTCCACCGGCAAACTTGACCCGTATCGTCTTCTCCAGATATTTGCTCAGATCGAGGATGGATTCCTTTCGTCGCTTTTCTTTATTGTCGCCTCCGCCGCCG CCGCCACCACTTCCTCCACCACCAGTCGAATTGCCGGATGCCGCTGGCTTCTTATCCGACATGATGCCGATCGAATGTAAAATACACCAGAACTTCTATCAGCGCTGAAACTGCAACGATTCGAAGGGGTTTGTTTA ]
[-] EMBL BX604865 [ GTATAAAGAAAAGTTTAACGAAAGATGTAACATAACGGATGAATGGAGCTTTCTGTAACAAATCCTTTGGCTAGTAACCAAAAAACAGTTTGTTGGATGAAAAGAACGATGAGAAACGATGAAACCTTCCGGCGATCCAGAGCTTTCGTTTACCACCGGAAGGAACTGGCTACAATCACAGGTAAGTGCAGCGTGTGGCAGCCGC CTCTCTCCATACACACCACCCACCGTACCTGCACTGCTTCCTCAAACTCCCCGCACTAGCGTTTATGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCATGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCACCAGTCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCACGCCGGCCGCTTCCCGTCCACCGGCAAACTTGAC ]
[-] EMBL BX606655 [ TTTACCACCGGAAGGAACTGGCTACAATCACAGGTAAGTGCAGCGAGTGGCAGCCGC CTCTCTCCATACACACCACCCACCGTACCCGCACTGCTTCCTCACACTCCCCGCACTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCCTGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCACCAGTCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCACGCCGGCCGCTTCCCGTCCACCGGCAAACTTGACCCGTATCGTCTTCTCCAGATATTTGCTCAGATCGAGGATGGATTCCTTTCGTCGCTTTTCTTTATTGTCGCCTCCGCCGCCGCCACCACCACCACTTCCACCACCACCAGTCGAATTGCCGGATGCCGCTGGCTTCTTATCCGACATGATGCCAATCGAATGTAAAATACACCAGAACTTCTATCAGCGCTGAAACTGCAACGATTCGAAGGGGTTTGTTTACAACAGGCG]
[-] EMBL BX603087 [ CAGCGTGTGGCAGCCGCCTCACTCTCTCTCTCTCTCTCCATACACACCACCCACCGTACCTGCACTGCTTCCTCAAACTGCCCGCACTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCCTGCGGACAGATCAACACCACCGACGTGCCCCGGCACACCACCAGCCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCACGCCGGCCGCTTCCCGTCCACCGGCAAACTTGACCCGTATCGTCTTCTCCAGATATTTGCTCAGATCGAGGATGGATTCCTTTCGTCGCTTTTCTTTATTGTCG ]
[-] EMBL AGA282443 [ TCCCCGCANTAGCCTTCCTGGGCGATGAAGGGGTTCTGTATCGATTCCATGCCATCCTGCGGGCAGATCAACACCACCGACGTGCCCCGGCACACCACCAGTCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCGCAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCACGCCGGCCGCTTCCCGTCCACCGGCAAACTTGACCCGTATCGTCTTCTCCAGATATTTGCTCAGATCGAGGATGGATTCCTTTCGTCGCTTTTCTTTATTGTCGCCTCCGCCGCCGCCACCACCACCACTTCCACCACCACCAGTCGAATTGCCGGATGCCGCTGGCTTCTTATCCGACATGATGCCAATCGAATGTAAAATACACCAGAAC ]
consensusID : consensus_7722#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence
[TTTTTTGTGTTTCGAGTAGGTTGGAATTTATTTACACGAAGAATCAACTCAACACCGATTAGAAGTTAAGTAGGCGAGCTTGGTTGGGGCAACGTCGATCCACAATTGCACCACAACACGTGGCGGAGGAGTTCGAACGTTCCACCATTTTTGTTTTATATGTACTTTGTTGTTCTGTTGTGTTGTGGCTTAAATGCTTCCTCTGTGCTATTTTTGTTTGAGTTATAATTTTATTGTTAGAGGTTTGGCCCGTGACCGCGGGAAAAAGGCACCACCGTGGGAGTGTGTGTGTGTGTGTGTCTGCGACGAACGATAAAATCAAAGCCCAGACGGGGGCAGTGTGGATAGTCGTTTGCCACACTCGAGTTCTGGTAAAAGTGTTAGGA]
[+] EMBL AGA280817 [TTTTTTGTGTTTCGAGTAGGTTGGAATTTATTTACACGAAGAATCAACTCAACACCGATTAGAAGTTAAGTAGGCGAGCTTGGTTGGGGCAACGTCGATCCACAATTGCACCACAACACGTGGCGGAGGAGTTCGAACGTTCCACCATTTTTGTTTTATATGTACTTTGTTGTTCTGTTGTGTTGTGGCTTAAATGCTTCCTCTGTGCTATTTTTGTTTGAGTTATAATTTTATTGTTAGAGGTTTGGCCCGTGACCGCGGGAAAAAGGCACCACCGTGGGAGTGTGTGTGTGTGTGTGTCTGCGACGAACGATAAAATCAAAGCCCAGACGGGGGCAGTGTGGATAGTCGTTTGCCACACTCGAGTTCTGGTAAAAGTGTTAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7722#0 ----------------------------------------------ACTCAACACCGATC 14
consensus_7722#1 TTTTTTGTGTTTCGAGTAGGTTGGAATTTATTTACACGAAGAATCAACTCAACACCGATT 60
*************
consensus_7722#0 GGAAGTTAAGTAGGCGAGCTTGGTTGGGGCAGCGTCGATCCACAATAGCACCACAACACG 74
consensus_7722#1 AGAAGTTAAGTAGGCGAGCTTGGTTGGGGCAACGTCGATCCACAATTGCACCACAACACG 120
****************************** ************** *************
consensus_7722#0 TGGCGGAGGAGTTCGAACGTTCCACCAGTTTTTGTTTTATATGTACTTTGTTGTTCTGTT 134
consensus_7722#1 TGGCGGAGGAGTTCGAACGTTCCACCA-TTTTTGTTTTATATGTACTTTGTTGTTCTGTT 179
*************************** ********************************
consensus_7722#0 GTGTTGTGGCTTAAATGCTTCCTCTGTGCTATTTTTGTTTGAGTTATAATTTTAACAACT 194
consensus_7722#1 GTGTTGTGGCTTAAATGCTTCCTCTGTGCTATTTTTGTTTGAGTTATAATTTTA------ 233
******************************************************
consensus_7722#0 ATTGTTAGAGGTTTAGTCCGTAATCGTGGGAAAACGGCACCACCGTGGGAGTGTGTGTGT 254
consensus_7722#1 -TTGTTAGAGGTTTGGCCCGTGACCGCGGGAAAAAGGCACCACCGTGGGAGTGTGTGTGT 292
************* * **** * ** ******* *************************
consensus_7722#0 GT------CTGCGACGAACGATAAAATCAAAGCCCAGATGGGGGCAGTGGGGAAAGTCGT 308
consensus_7722#1 GTGTGTGTCTGCGACGAACGATAAAATCAAAGCCCAGACGGGGGCAGTGTGGATAGTCGT 352
** ****************************** ********** *** ******
consensus_7722#0 TTTCCACACTCGAGTTCTGGTAGAAGTGTTAGGAGTAAGTTACTTAAGCATAAGTTAATA 368
consensus_7722#1 TTGCCACACTCGAGTTCTGGTAAAAGTGTTAGGA-------------------------- 386
** ******************* ***********
consensus_7722#0 AATTGATCGATTTACCGATCTCTCTTCCAGAAACTAGTTAAGATTTTGCGTTCGTCTCGT 428
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 TCACCCCTTTCCACTACATTTCCTTCGGCAGTTCCTTGTTCCTACAGCCTGAACCATTTC 488
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 GGTTAAGAATTTCGTGATTGGGACTACAAAAAATGGAGAAAATATGAATGTATGAATAAT 548
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 AACGGAATGGTGTATAAAGAAAAGTTTAACGAAAGATGTAACATAACGGATGAATGGAGC 608
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 TTTCTGTAACAAATCCTTTGGCTAGTAACCAAAAAACAGTTTGTTGGATGAAAAGAAATA 668
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 TGAGAAACGATGAAACCTTCCGGCGATCCAGAGCTTTCGTTTACCACCGGAAGGAACTGG 728
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 CTACAATCACAGGTAAGTGCAGCGTGTGGCAGCCGCCTCTCTCTCTCTCTCCATACACAC 788
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 CACCCACCGTACCTGCACTGCTTCCTCACACTCCCCGCACTAGCCTTCCTGGGCGATGAA 848
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 GGGGTTCTGTATCGATTCCATGCCATCCTGCGGGCAGATCAACACCACCGACGTGCCCCG 908
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 GCACACCACCAGTCCCAGGTGCCGCGTATCGTCCGCCAGCTTGTAATCGTCCGGATCGCG 968
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 CAAAAACTCTATCGTATTGTCCAGCACCAGGTTCAGCAGCGGATCGTAACCCTTCAGCAC 1028
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 GCCGGCCGCTTCCCGTCCACCGGCAAACTTGACCCGTATCGTCTTCTCCAGATATTTGCT 1088
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 CAGATCGAGGATGGATTCCTTTCGTCGCTTTTCTTTATTGTCGCCTCCGCCGCCGCCACC 1148
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 ACCACTTCCACCACCACCAGTCGAATTGCCGGATGCCGCTGGCTTCTTATCCGACATGAT 1208
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 GCCAATCGAATGTAAAATACACCAGAACTTCTATCAGCGCTGAAACTGCAACGATTCGAA 1268
consensus_7722#1 ------------------------------------------------------------
consensus_7722#0 GGGGTTTGTTTACAACAGGCG 1289
consensus_7722#1 ---------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||