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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7723#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 740 fasta sequence
[CCGCCCACGCGGGAGCGCAACCAGTTCGCAGCGTGCTAACGATGATTCGAACGTGCAAGGTGATGCGATTTTGTGCACAAACTAGTGTCCGTGTACCGTGCTATCGACAGTTTGGTGTGGTGAGTTGTGTGCAGCAGAAACTTGCTTCCTCCCTTTGCGCACCGCGTGGCACGCGCGTGAGTGAAATAGTGCCGGAAGCATCGTCCACTACGCCCGGCGACCCGGCGGGAAAGAAACAATCCGCCGTACCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACAATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGTCCAAGCTGCGGCCGGACCGTAAATCGGCAGA--CGCG-TCGCGGGAAGCAGCGAAACCGCCAGCCCCGCCCGTGCACA-GGAAAACTGCAATCGAGAAAGACACACTCCAGATACTGCAGCACCGCTACCA-GGATCCG-AACGAGTCGG-AGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACAATACTA-CA-GTCGAACGATGCCCGGTACC-GGGATTTGATGATGCTGATTGGAT-CGCG-CAAAAACC--GGG-AGCGCCAAACGGGA-TGC-TGG-TGC-TGG-AGGG--CCGGC-GGTTGATATTGGAATGGGCTACCAAGGCCCGGGTTTTTACGGGCTGGGAATCGCTGATTGGTTACCAATCGGATGGTGGAAACTTGCCTGGGCGGCGAA]
[+] EMBL BM610470 [CCGCCCACGCGTCCGCGCAAGCAGTTCGCAGCGTGCTAACGATGATTCGAACGTGGAAGGTGATGCGATTTTGTGCACAAACTAGTGTCCGTGTACCGTGCTATCGACAGTTTGGTGTGGTGAGTTGTGTGCAGCAGAAACTTGCTTCCTCCCTTTGCGCACCGCGTGGCACGCGCGTGAGTGAAATAGTGCCGGAAGCATCGTCCACTACGCCCGGCGACCCGGCGGGAAAGAAACAATCCGCCGTACCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACAATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGTCCAAGCTGCGGCCGGACCGTAAATCGGCAGA CGCG TCGCGGGAAGCAGCGAAACCGCCAGCCCCGCCCGTGCACA GGAAAACTGCAATCGAGAAAGACACACTCCAGATACTGCAGCACCGCTACCA GGATCCG AACGAGTCGG AGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACAATACTA CA GTCGAACGATGCCCGGTACC GGGATTTGATGATGCTGATTGGAT ]
[+] EMBL BM657706 [ GGGAGCGCAACCAGTTCGCAGCGTGCTAACGATGATTCGAACGTGCAAGGTGATGCGATTTTGTGCACAAACTAGTGTCCGTGTACCGTTTTATCGACAGTTTGGTGTGGTGAGTTGTGTGCAGCAGAAACTTGCTTCCTCCCTTTGCGCACCGCGTGGCACGCGCGTGAGTGAAATAGTGCCGGAAGCATCGTCCGCTACGCCCGGCGACCCGGCGGGAAAGAAACAATCCGCCGTACCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACAATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGTCCAAGCTGCGGCCGGACCGTAAATCGGCAGA CGCG TCGCGGGAAGCAGCGAAACCGCCAGCCCCGCCCGTGCACAGGGAAAACTGCAATCGAGAAAGACACACTCCAGATACTGCAGCACCGCTACCAGGGATCCGAAACGAGTCGGAAGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACCCAATACTACCAGGTCGAACGATGCCCGGTACCGGGGATTTGATGATGCTGATTGGATCCCCGCCAAAAACCCGGGGAAGCGCCAAACGGGATTGCTTGGTTGCTTGGAAGGGCCCCGGCGGGTTGATATTGGAATGGGCTACCAAGGCCCGGGTTTTTACGGGCTGGGAATCGCTGATTGGTTACCAATCGGATGGTGGAAACTTGCCTGGGCGGCGAA]
[+] EMBL BM601868 [ ccGAGCGCAACCAGTTCGCAGCGTGCTAACGATGATTCGAACGTGCAAGGTGATGCGATTTTGTGCACAAACTAGTGTCCGTGTACCGTTTTATCGACAGTTTGGTGTGGTGAGTTGTGTGCAGCAGAAACTTGCTTCCTCCCTTTGCGCACCGCGTGGCACGCGCGTGAGTGAAATAGTGCCGGAAGCATCGTCCGCTACGCCCGGCGACCCGGCGGGAAAGAAACAATCCGCCGTACCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACAATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGTCCAAGCTGCGGCCGGACCGTAAATCGG AGAACCCCGTTCGCGGGAAGCAGCGAAACCGCCAGCCCCGCCCGTGCACA GGAAAACTGCAATCGAGAAAGACACACTCCAGATACTGCAGCACCGCTACCA GGATCCG AACGAGTCGG AGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACTATACTA CA GTCGAACGATGCCCGGTACC GGGATTTGATGATGCTGATTGGAT CGCG CAAAAACC GGG AGCG CGAGC GGA TGC TGG TGC TGG AGGG CCGGC GGTTGAT ]
[+] EMBL BX603543 [ AGTGTCCGTGTACCGTGCTATCGACAGTTTGGTGTGGTGAGTTGTGTGCAGCAGAAACTTGCTTCCTCCCTTTGCGCACCGCGTGGCACGCGCGTGAGTGAAATAGTGCCGGAAGCATCGTCCACTACGCCCGGCGACCCGGCGGGAAAGAAACAATCCGCCGTACCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACAATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGTCCAAGCTGCGGCCGGACCGTAAATCGGCAGA CGCG TCGCGGGAAGCAGCGAAACCGCCAGCCCCGCCCGTGCACA GGAAAACTGCAATCGAGAAA ]
[+] EMBL CNS08ZM1 [ GCGCGTGAGTGAAATAGTGCCGGAAGCATCGTCCACTACGCCCGGCGACCCGGCGGGAAAGAAACAATCCGCCGTAGCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACAATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGCCCAAGCTGCGGCCGGACCGTAAATCCCCAGA CGCG TCG GGGAAGCAGCGAAACCGCCAGCCCCGCCCGTGCACA GGAAAACTGCAATCGAGAAAGACACACTCCAGATACTGCAGCACCGCTACCA GGATCCG AACGAGTCGG AGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACAATACTA CA GTCGAACGATGCCCGGTACC GGGATTTGATGATGCTGATTGGAT CGCG CAAAAACC GGG AGCGC GAGGGCA TGC TGG TGC TGG AGGG CCGGC GGTTGATAATGG AT GGCTACC AGGCC GGTTTac ]
consensusID : consensus_7723#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 595 fasta sequence
[AGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACAATACTACAGTCGAACGATGCCCGGTACCGGGATTTGATGATGCTGATTGGATCGCGCAAAAACCGGGAGCGCGAGCGGATGCTGGTACTGGAGGGCCGGCGGTTGATAATGGATGGCTACCAGGCCGGCTTACGGCTGGAAGCAATTGTGACGAGTGATGTGAAGCTGCTGGCGGATCTAACTTTCAGGGCAAAGCTGAAAGCCTGCCCCATTTTTCTCGTTAAACGGCAAACCATGATGGAGTGGTCATCGTTAACAACGAGCCCGGGCTTGATAGGGATCTTCGGCGAACCGTCTAATATGAGCGAGCTAGTTACCCGGAACGCGACCGGCAGCAAACGGCTTCCGGTGACGGTGGTTTGTGACAACATCCGCGAGCCGAACAATTTGGGCAGCATTGTGCGGAGCTGCGCCGCGG-TATCCGTACGGGAAGTAATTCTGCTGAAAGGTTGCGCCCCATCCGTGGGATCTGAAGTGCCTGCGGGGCGGGGCCGGCGCACACTTCCGCGTGCCGATTTACGGTCCGATCGAAGCGTACCAGCTGCCCGAGCACGTGC]
[+] EMBL BX610519 [AGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACAATACTACAGTCGAACGATGCCCGGTACCGGGATTTGATGATGCTGATTGGATCGCGCAAAAACCGGGAGCGCGAGCGGATGCTGGTACTGGAGGGCCGGCGGTTGATAATGGATGGCTACCAGGCCGGCTTACGGCTGGAAGCAATTGTGACGAGTGATGTGAAGCTGCTGGCGGATCTAACTTTCAGGGCAAAGCTGAAAGCCTGCCCCATTTTTCTCGTTAAACGGCAAACCATGATGGAGTGGTCATCGTTAACAACGAGCCCGGGCTTGATAGGGATCTTCGGCGAACCGTCTAATATGAGCGAGCTAGTTACCCGGAACGCGACCGGCAGCAAACGGCTTCCGGTGACGGTGGTTTGTGACAACATCCGCGAGCCGAACAATTTGGGCAGCATTGTGCGGAGCTGCGCCGCGG TATCCGTACGGGAAGTAATTCTGCTGAAAGGTTGCGCCCCATCCGTGGGATCTGAAGTGCCTGCGGGGCGGGGCCGGCGCACACTTCCGCGTGCCGATTTACGGTCCGATCGAAGCGTACCAGCTGCCCGAGCACGTGC]
[+] EMBL BX610518 [ ACGACAAGGAGTTGAAACTGCGCTACACAATACTACAGTCGAACGATGCCCGGTACCGGGATTTGATGATGCTGATTGGATCGCGCAAAAACCGGGAGCGCGAGCGGATGCTGGTACTGGAGGGCCGGCGGTTGATAATGGATGGCTACCAGGCCGGCTTACGGCTGGAAGCAATTGTGACGAGTGATGTGAAGCTGCTGGCGGATCTAACTTTCAGGGCAAAGCTGAAAGCCTGCCCCATTTTTCTCGTTAAACGGCAAACCATGATGGAGTGGTCATCGTTAACAACGAGCCCGGGCTTGATAGGGATCTTCGGCGAACCGTCTAATATGAGCGAGCTAGTTACCCGGAACGCGACCGGCAGCAAACGGCTTCCGGTGACGGTGGTTTGTGACAACATCCGCGAGCCGAACAATTTGGGCAGCATTGTGCGGAGCTGCGCCGCGGTTATCCGTACCGGAAGTAATTC ]
[+] EMBL BX610520 [ ATAGGATCGCGCAAAAACCGGGAGCGCGAGCGGATGCTGGTACTGGAGGGCCGGCGGTTGATAAAGGAGGGCAACCAGGCCGGCTCACGGCTGGAAGCAATTGTGACGAGTGAAGTGAAGCTGCTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7723#0 CCGCCCACGCGGGAGCGCAACCAGTTCGCAGCGTGCTAACGATGATTCGAACGTGCAAGG 60
consensus_7723#1 --------------------------AGGAGCGGTACGACAAGGAGTTGAAACTGC---G 31
* **** ** * ** * *** *** *
consensus_7723#0 TGATGCGATTTTGTGCACAAACTAGTGTCCGTGTACCGTGCTATCGACAGTTTGGTGTGG 120
consensus_7723#1 CTACACAATACTACAGTCGAAC-GATGCCCG-GTACCGGG---------ATTTGATGATG 80
* * ** * * *** ** *** ****** * **** ** *
consensus_7723#0 TGAGTTGTGTGCAGCAGAAACTTGCTTCCTCCCTTTGCGCACCGCGTGGCACGCGCGTGA 180
consensus_7723#1 CTGATTGGATCGCGCAAAAACCGG------------GAGCGCGAGCGGATGCTGGTACTG 128
*** * *** **** * * ** * * * *
consensus_7723#0 GTGAAATAGTGCCGGAAGCATCGTCCACTACGCCCGGCGACCCGGCGGGAAAGAAACAAT 240
consensus_7723#1 GAGGGCCGGCGGTTGATA-ATGGATGGCTAC--CAGGCCGGCTTACGGCTGGAAGCAATT 185
* * * * ** ** * **** * *** * *** * * *
consensus_7723#0 CCGCCGTACCGAGTGAACACACCGACGACGGCTGGGGTGCTGAAGATGAGCTGCTAAACA 300
consensus_7723#1 GTGACGAGTGATGTGAA---GCTGCTGGCGGATCTAACTTTCAGGGCAAA--GCTGAAAG 240
* ** ***** * * * *** * * * * * *** **
consensus_7723#0 ATCGCAAAAGTATTCCCAACCTAAAGGTTTCGGAGCTGCTGAAAGATGTGCCACGGTCCA 360
consensus_7723#1 CCTGCCCCATTTTTCTCG--TTAAACG----GCAAACCATGATGGAGTGGTCATCGTTAA 294
** * * *** * **** * * * *** ** * ** ** *
consensus_7723#0 AGCTGCGGCCGGACCGTAAATCGGCAGACGCGTCGCGGGAAGCAGCGAAACCGCCAGCCC 420
consensus_7723#1 CAACGAGCCCGGGC------TTGATAGGGATCTTCGGCGAACCGTCTAATATG---AGCG 345
* * **** * * * ** * * *** * * ** * *
consensus_7723#0 CGCCCGTGCACAGGAAAACTGCAATCGAGAAAGACACACTCCAGATACTGCAGCACCGCT 480
consensus_7723#1 AGCTAGTTACCCGGAA---CGCGACCGGCAGCAAACGGCTTCCGGTGACGGTGGTTTG-T 401
** ** * **** ** * ** * * ** * * * * * * *
consensus_7723#0 ACCAGGATCCGAACGAGTCGGAGGAGCGGTACGACAAGGAGTTGAAACTGCGCTACACAA 540
consensus_7723#1 GACAACATCCG--CGAGCCGAACAATTTGGGCAGCATTGTGC-GGAGCTGCGCCGC---- 454
** ***** **** ** * * * * ** * * * * ****** *
consensus_7723#0 TACTACAGTCGAACGATGCCCGGTACCGGGATTTGATGATGCTGATTGGATCGCGCAAAA 600
consensus_7723#1 --------------GGTATCCG-TAC-GGGAAGTAATTCTGCTGAA-AGGTTGCGCCCCA 497
* * *** *** **** * ** ****** * * **** *
consensus_7723#0 ACCGGGAGCGCCAAACGGGATGCTGGTGCTGGAGGGCCGGCGGTTGATATTGGAATGGGC 660
consensus_7723#1 TCCGTGGGATCTGAA----GTGCCTGCGGGGCGGGGCCGGCG-------------CACAC 540
*** * * * ** *** * * * ********* *
consensus_7723#0 TACCAAGGCCCGGGTTTTTACGGGCTGGGAATCGCTGATTGGTTACC-AATCGGATGGTG 719
consensus_7723#1 TTCCGCGTGCCGA---TTTACGGTCCGATCGAAGCGTACCAGCTGCCCGAGCACGTGC-- 595
* ** * *** ******* * * ** * * * ** * * **
consensus_7723#0 GAAACTTGCCTGGGCGGCGAA 740
consensus_7723#1 ---------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||