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Anopheles gambiae
cluster # 7730 cluster # 7730       Sequences # 8       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7730#0 length = 1210 sequences # 3  
consensus_7730#1 length = 910 sequences # 1  
consensus_7730#2 length = 575 sequences # 1  
consensus_7730#3 length = 544 sequences # 1  
consensus_7730#4 length = 339 sequences # 1  
consensus_7730#5 length = 123 sequences # 1  

consensusID : consensus_7730#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1210
fasta sequence
                              [CCGCCCACGCGTCCGCCTGCCTGCTGCGCCGAAGTGGTGGCAAACTGCCCGAAGGGTTCGTTGGCTGCGGTGGCGATGGGAAGGGTTCGTGCGACATCGAGGACGTACCGAACGGGTGCTTCCTGGCAGGAAACGGGGCCGGTGGTGATACGGCACGTGACGAAGCGGGCCACAAGAAGGTGGCCGGATATCTGAATCTGCTGGCCAATTCGATCGACAACTTTACGCACGGGCTGGCGGTGGCGGGTTCGTTCCTGGTCTCGCTACAGCACGGCCTACTGGCTACGTTTGCCATTTTGTTGCACGAAATTCCGCACGAAGTGGGCGACTTTGCGATCCTGCTCCGGTCCGGATTTAGCCGCTGGGATGCGGCCAAGGCGCAGCTTCTAACCGCCGGGGCCGGTTTGCTCGGTGCGCTGGTGGCGATCGGTGGTAGCGGTGCTACGACGGCGCTGGAAGCAAAAACCTCCTGGATTGCACCGTTCACTGCCGGTGGCTTTCTGCACATTGCACTCGTGACGGTGCTGCCGGATCTGCTGGACGAGTCGAGCCCGTGGGAATCGTTCAAGCAGTTTGCCGCCCTGCTGCTCGGCATCGGATTAATGGCGTTCATGACCATTTATCTAGAACATTAGGGTTTATGGTAATAGTGCAAGGTACATTTCAAGGCTGGCTGGTTTCCGGCGGCAAGTACACAGTACACGGTGTGCGTGGTTCGTTTGTTGCGTTGCGCATCGGAAACGGTACGTTTATTTTTGTATAGATATTTGTTAAACTGTCCCGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTACCTACAACTGGTAGGGGAAATTGACTACACCCTTTCCCTCCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAAGATAGGTAGAATGGCAGGCGTGATTGGAAATTATAGTTAATAGCTGTAAGGAACAAATGTAGGACTTCAACACACGTGCGTGCGTGCGTGCGTGCGTAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGAAGATGCCATATGTTAATATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCG]

[+] EMBL BM613772             [CCGCCCACGCGTCCGCCTGCCTGCTGCGCCGAAGTGGTGGCAAACTGCCCGAAGGGTTCGTTGGCTGCGGTGGCGATGGGAAGGGTTCGTGCGACATCGAGGACGTACCGAACGGGTGCTTCCTGGCAGGAAACGGGGCCGGTGGTGATACGGCACGTGACGAAGCGGGCCACAAGAAGGTGGCCGGATATCTGAATCTGCTGGCCAATTCGATCGACAACTTTACGCACGGGCTGGCGGTGGCGGGTTCGTTCCTGGTCTCGCTACAGCACGGCCTACTGGCTACGTTTGCCATTTTGTTGCACGAAATTCCGCACGAAGTGGGCGACTTTGCGATCCTGCTCCGGTCCGGATTTAGCCGCTGGGATGCGGCCAAGGCGCAGCTTCTAACCGCCGGGGCCGGTTTGCTCGGTGCGCTGGTGGCGATCGGTGGTAGCGGTGCTACGACGGCGCTGGAAGCAAAAACCTCCTGGATTGCACCGTTCACTGCCGGTGGCTTTCTGCACATTGCACTCGTGACGGTGCTGCCGGATCTGCTGGACGAGTCGAGCCCGTGGGAATCGTTCAAGCAGTTTGCCGCCCTGCTGCTCGGCATCGGATTAATGGCGTTCATGACCATTTATCTAGAACATTAGGGTTTATGGTAATAGTGCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM655112             [                                                                                                                                                                                                                                                                                                                                                                                       ccGCGCAGCTTCTAACCGCCGGGGCCGGTTTGCTCGGTGCGCTGGTGGCGATCGGTGGTAGCGGTGCTACGACGGCGCTGGAAGCAAAAACCTCCTGGATTGCACCGTTCACTGCCGGTGGCTTTCTGCACATTGCACTCGTGACGGTGCTGCCGGATCTGCTGGACGAGTCGAGCCCGTGGGAATCGTTCAAGCAGTTTGCCGCCCTGCTGCTCGGCATCGGATTAATGGCGTTCATGACCATTTATCTAGAACATTAGGGTTTATGGTAATAGTGCAAGGTACATTTCAAGGCTGGCTGGTTTCCGGCGGCAAGTACACAGTACACGGTGTGCGTGGTTCGTTTGTTGCGTTGCGCATCGGAAACGGTACGTTTATTTTTGTATAGATATTTGTTAAACTGTCCCGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTACCTACAACTGGTAGGGGAAATTGACTACACCCTTTCCCTCCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAAGATAG                                                                                                                                                                                             ]
[-] EMBL CNS08GVZ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACGATTACTACTTTCTACCTACAACTGGTAGGGGAAATAGACAACACCCTTTCCCTCCCACACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCTAGAGAGAACGATTCTGAACCGTCTTTCAAAATTAAGTTAGTTGATAATTGAGTAAGATACGTAGAATGGCAGGCGTGATTGGAAATTATAGTTAATAGCTGTAAGGAACAAATGTAGGACTTCAACACACGTGCGTGCGTGCGTGCGTGCGTAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGAAGATGCCATATGTTAATATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCG]


>consensus_7730#0 CCGCCCACGCGTCCGCCTGCCTGCTGCGCCGAAGTGGTGGCAAACTGCCCGAAGGGTTCG TTGGCTGCGGTGGCGATGGGAAGGGTTCGTGCGACATCGAGGACGTACCGAACGGGTGCT TCCTGGCAGGAAACGGGGCCGGTGGTGATACGGCACGTGACGAAGCGGGCCACAAGAAGG TGGCCGGATATCTGAATCTGCTGGCCAATTCGATCGACAACTTTACGCACGGGCTGGCGG TGGCGGGTTCGTTCCTGGTCTCGCTACAGCACGGCCTACTGGCTACGTTTGCCATTTTGT TGCACGAAATTCCGCACGAAGTGGGCGACTTTGCGATCCTGCTCCGGTCCGGATTTAGCC GCTGGGATGCGGCCAAGGCGCAGCTTCTAACCGCCGGGGCCGGTTTGCTCGGTGCGCTGG TGGCGATCGGTGGTAGCGGTGCTACGACGGCGCTGGAAGCAAAAACCTCCTGGATTGCAC CGTTCACTGCCGGTGGCTTTCTGCACATTGCACTCGTGACGGTGCTGCCGGATCTGCTGG ACGAGTCGAGCCCGTGGGAATCGTTCAAGCAGTTTGCCGCCCTGCTGCTCGGCATCGGAT TAATGGCGTTCATGACCATTTATCTAGAACATTAGGGTTTATGGTAATAGTGCAAGGTAC ATTTCAAGGCTGGCTGGTTTCCGGCGGCAAGTACACAGTACACGGTGTGCGTGGTTCGTT TGTTGCGTTGCGCATCGGAAACGGTACGTTTATTTTTGTATAGATATTTGTTAAACTGTC CCGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAG CTGACGATTACTACTATTTACCTACAACTGGTAGGGGAAATTGACTACACCCTTTCCCTC CCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCC AAGAGAGAACGATTCTGAACCGTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAAGATA GGTAGAATGGCAGGCGTGATTGGAAATTATAGTTAATAGCTGTAAGGAACAAATGTAGGA CTTCAACACACGTGCGTGCGTGCGTGCGTGCGTAGGCTAGCAGGGACACGGTGTGATCGA ATCACGAAGAAATTAGAAGATGCCATATGTTAATATATTATTGATGTTGTCTTCCGATTT CGGAGGAGCG



consensusID : consensus_7730#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 910
fasta sequence
                              [CAAGAATCCCCTGANGGTTATGTGATAGTGTTATGCTGACGATTACTACTGTCTACCTACAACTGGTAGTGGGAAATAGACAACACCCTTTCCCTACCCACACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATATGAAAGAGAGCCCTAAGAGAGAACGATTCTGAACTGTCTTTCACAAATTNAAGTTAGTTTGCTNATTTGCAGTAAAGATACGTAAGAATTGTGCAGTGCTGTGCATTTGGCAANTTCATANGTTAATNAGCAAGTAAAGTGAACAGGATATAGTGACTCCAACCCACTGTTGCGTGCGTGCGTTGCCATAGTCGCTAGCAGCCCAGGGAACCACGGGTTGTTGGAATACGAAATTACACACGGACACNGCAACATATCAAGAACAGAAATTGGACCNATAAATTGGTAANACCTAATAAATACACATANAGGAATAGGTAAGGTCCNTACAACCCGGCATACATCCNGANGAGGGACGGCNNGTTATTAACCNCCGCATNAAAAAAANGNTCAACCACACAAACATNAACCTCTCACAAGCAAACAACCTTNCTGGCCAAATAAAGCTTAATGACCATACANAAAGTTANACACANCAANCACANAACGCCACNCGTCCCGNACANTNCAAGCGGNCAGGNCCCAAAAGGACAAACANCACCAGGAAGGCNACCCAAAATNGGACAACTCGGGGCNACAAGCANACACAGNAAANAGGGGGCGGCTNAGGTATGGAAGGGTAGGGGTTAGNAACGCCCCAAAGCCGCTCAGCGCCACAAGAGGCACGNCAAAANAACACNGCCGAAAACCCNGNGAACNCNANCAGCCCCAANGGACGACCANCCCAACGACCNNATNGGAGAAANACGCANGAGCACAATCANNG]

[+] EMBL AL695263             [CAAGAATCCCCTGANGGTTATGTGATAGTGTTATGCTGACGATTACTACTGTCTACCTACAACTGGTAGTGGGAAATAGACAACACCCTTTCCCTACCCACACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATATGAAAGAGAGCCCTAAGAGAGAACGATTCTGAACTGTCTTTCACAAATTNAAGTTAGTTTGCTNATTTGCAGTAAAGATACGTAAGAATTGTGCAGTGCTGTGCATTTGGCAANTTCATANGTTAATNAGCAAGTAAAGTGAACAGGATATAGTGACTCCAACCCACTGTTGCGTGCGTGCGTTGCCATAGTCGCTAGCAGCCCAGGGAACCACGGGTTGTTGGAATACGAAATTACACACGGACACNGCAACATATCAAGAACAGAAATTGGACCNATAAATTGGTAANACCTAATAAATACACATANAGGAATAGGTAAGGTCCNTACAACCCGGCATACATCCNGANGAGGGACGGCNNGTTATTAACCNCCGCATNAAAAAAANGNTCAACCACACAAACATNAACCTCTCACAAGCAAACAACCTTNCTGGCCAAATAAAGCTTAATGACCATACANAAAGTTANACACANCAANCACANAACGCCACNCGTCCCGNACANTNCAAGCGGNCAGGNCCCAAAAGGACAAACANCACCAGGAAGGCNACCCAAAATNGGACAACTCGGGGCNACAAGCANACACAGNAAANAGGGGGCGGCTNAGGTATGGAAGGGTAGGGGTTAGNAACGCCCCAAAGCCGCTCAGCGCCACAAGAGGCACGNCAAAANAACACNGCCGAAAACCCNGNGAACNCNANCAGCCCCAANGGACGACCANCCCAACGACCNNATNGGAGAAANACGCANGAGCACAATCANNG]


>consensus_7730#1 CAAGAATCCCCTGANGGTTATGTGATAGTGTTATGCTGACGATTACTACTGTCTACCTAC AACTGGTAGTGGGAAATAGACAACACCCTTTCCCTACCCACACTGAACGGTAACAAGCGA TGTAAATATAAATCATGATGCATATGAAAGAGAGCCCTAAGAGAGAACGATTCTGAACTG TCTTTCACAAATTNAAGTTAGTTTGCTNATTTGCAGTAAAGATACGTAAGAATTGTGCAG TGCTGTGCATTTGGCAANTTCATANGTTAATNAGCAAGTAAAGTGAACAGGATATAGTGA CTCCAACCCACTGTTGCGTGCGTGCGTTGCCATAGTCGCTAGCAGCCCAGGGAACCACGG GTTGTTGGAATACGAAATTACACACGGACACNGCAACATATCAAGAACAGAAATTGGACC NATAAATTGGTAANACCTAATAAATACACATANAGGAATAGGTAAGGTCCNTACAACCCG GCATACATCCNGANGAGGGACGGCNNGTTATTAACCNCCGCATNAAAAAAANGNTCAACC ACACAAACATNAACCTCTCACAAGCAAACAACCTTNCTGGCCAAATAAAGCTTAATGACC ATACANAAAGTTANACACANCAANCACANAACGCCACNCGTCCCGNACANTNCAAGCGGN CAGGNCCCAAAAGGACAAACANCACCAGGAAGGCNACCCAAAATNGGACAACTCGGGGCN ACAAGCANACACAGNAAANAGGGGGCGGCTNAGGTATGGAAGGGTAGGGGTTAGNAACGC CCCAAAGCCGCTCAGCGCCACAAGAGGCACGNCAAAANAACACNGCCGAAAACCCNGNGA ACNCNANCAGCCCCAANGGACGACCANCCCAACGACCNNATNGGAGAAANACGCANGAGC ACAATCANNG



consensusID : consensus_7730#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence
                              [CAGAATCCCGAGGTTTTTGTATAGATATTTGTTAACTGTCCCGTAAGAAANAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTACCTACAACTGGTAGGGGAAATTGACTACACCTTTNCCTCCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAACGATAGTACGAATGGCAGGCGTGATTGGGAATTATAGTTCATAGCAGTAAGGAACACAATATAGGACTTCAACACACGTGCGTGCGTGCGTGCATAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGCCNTATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCGTTTTCCGATAAAAGTAAACAATTACTTCAGCAAACTTTGTNATACTTTGCAATTTATTCAAAAAACCACTCCTCTCACGCGCAACAAAACAGACTCNATGAATGGTAG]

[+] EMBL AL930812             [CAGAATCCCGAGGTTTTTGTATAGATATTTGTTAACTGTCCCGTAAGAAANAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTACCTACAACTGGTAGGGGAAATTGACTACACCTTTNCCTCCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAACGATAGTACGAATGGCAGGCGTGATTGGGAATTATAGTTCATAGCAGTAAGGAACACAATATAGGACTTCAACACACGTGCGTGCGTGCGTGCATAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGCCNTATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCGTTTTCCGATAAAAGTAAACAATTACTTCAGCAAACTTTGTNATACTTTGCAATTTATTCAAAAAACCACTCCTCTCACGCGCAACAAAACAGACTCNATGAATGGTAG]


>consensus_7730#2 CAGAATCCCGAGGTTTTTGTATAGATATTTGTTAACTGTCCCGTAAGAAANAACTTATAC GCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTA CCTACAACTGGTAGGGGAAATTGACTACACCTTTNCCTCCCATACTGAACGGTAACAAGC GATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACC GTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAACGATAGTACGAATGGCAGGCGTGAT TGGGAATTATAGTTCATAGCAGTAAGGAACACAATATAGGACTTCAACACACGTGCGTGC GTGCGTGCATAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGC CNTATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCGTTTTCCGATAAAA GTAAACAATTACTTCAGCAAACTTTGTNATACTTTGCAATTTATTCAAAAAACCACTCCT CTCACGCGCAACAAAACAGACTCNATGAATGGTAG



consensusID : consensus_7730#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence
                              [GATCGCCCCGAGGTNTAAACGGTACGTTTATTTTTGTACTAGATATTTGTTAAACTGTCCCGGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTACCTACAACTGGGTAGGGGAAATTGACTACACCCTTTCCCTCCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTCAAGTTAGTTGCTAATTGAGTAAGATAGTAGAATGGCAGGCGTGATTGGAAATTATCAGTTAATAGCCAGTAAGGAACAAATATCAGGACTCTCAACACACGTGCGTGCGTAGCGTAGCATAGGCTCAGCCCAGGGACAACCGNGGGTCGGTTTGCAAATTCCCCGGAAGAAATTTCCCAACCGGGGAAACACGGGANACAAGCACGTTTCTCAAAGGAAACTCGGNAAATTTGGTCCCCCACATTCACATTCAGGCTTCGCTNAACCT]

[+] EMBL AL929731             [GATCGCCCCGAGGTNTAAACGGTACGTTTATTTTTGTACTAGATATTTGTTAAACTGTCCCGGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTACCTACAACTGGGTAGGGGAAATTGACTACACCCTTTCCCTCCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTCAAGTTAGTTGCTAATTGAGTAAGATAGTAGAATGGCAGGCGTGATTGGAAATTATCAGTTAATAGCCAGTAAGGAACAAATATCAGGACTCTCAACACACGTGCGTGCGTAGCGTAGCATAGGCTCAGCCCAGGGACAACCGNGGGTCGGTTTGCAAATTCCCCGGAAGAAATTTCCCAACCGGGGAAACACGGGANACAAGCACGTTTCTCAAAGGAAACTCGGNAAATTTGGTCCCCCACATTCACATTCAGGCTTCGCTNAACCT]


>consensus_7730#3 GATCGCCCCGAGGTNTAAACGGTACGTTTATTTTTGTACTAGATATTTGTTAAACTGTCC CGGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGATAGGTTTAG CTGACGATTACTACTATTTACCTACAACTGGGTAGGGGAAATTGACTACACCCTTTCCCT CCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGATGCATTGAAAGAGAGCGC CAAGAGAGAACGATTCTGAACCGTCTTTCAAAATTCAAGTTAGTTGCTAATTGAGTAAGA TAGTAGAATGGCAGGCGTGATTGGAAATTATCAGTTAATAGCCAGTAAGGAACAAATATC AGGACTCTCAACACACGTGCGTGCGTAGCGTAGCATAGGCTCAGCCCAGGGACAACCGNG GGTCGGTTTGCAAATTCCCCGGAAGAAATTTCCCAACCGGGGAAACACGGGANACAAGCA CGTTTCTCAAAGGAAACTCGGNAAATTTGGTCCCCCACATTCACATTCAGGCTTCGCTNA ACCT



consensusID : consensus_7730#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 339
fasta sequence
                              [CGACCCACGCGTCCGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGCCATATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCGTTTTCCGATAAAAGTAAACAATTACTTCAGCAAACTTTGTAATACTTTGCAATTTATTCAAAAAACCACTCCTCTCACGCGCAACAAAACAGACTCAATGAATGGTAGTTAGACGGTGTGTGTGTGTGTCTAGCAAACTAGTCGGATTGAATTTTTACCGAACTACCAATCCTCCCCTTCTGTGAAGCAATTATTACTGTAACGTGTATCTGTAAATTCCAACATTTCTCAATTTGTA]

[+] EMBL BM638483             [CGACCCACGCGTCCGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGCCATATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCGTTTTCCGATAAAAGTAAACAATTACTTCAGCAAACTTTGTAATACTTTGCAATTTATTCAAAAAACCACTCCTCTCACGCGCAACAAAACAGACTCAATGAATGGTAGTTAGACGGTGTGTGTGTGTGTCTAGCAAACTAGTCGGATTGAATTTTTACCGAACTACCAATCCTCCCCTTCTGTGAAGCAATTATTACTGTAACGTGTATCTGTAAATTCCAACATTTCTCAATTTGTA]


>consensus_7730#4 CGACCCACGCGTCCGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGCCATATG TTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCGTTTTCCGATAAAAGTAAAC AATTACTTCAGCAAACTTTGTAATACTTTGCAATTTATTCAAAAAACCACTCCTCTCACG CGCAACAAAACAGACTCAATGAATGGTAGTTAGACGGTGTGTGTGTGTGTCTAGCAAACT AGTCGGATTGAATTTTTACCGAACTACCAATCCTCCCCTTCTGTGAAGCAATTATTACTG TAACGTGTATCTGTAAATTCCAACATTTCTCAATTTGTA



consensusID : consensus_7730#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 123
fasta sequence
                              [GAAGGCAACGGTTCTCTGCGGGAAACGGGGCTGTGATACGCGCGTACGAACGGGCACAGAAGTGCGGATATCTAATCTGCTGGCATTCGATCGACACTTTACGCACGGGCTGCGGTGGCGGGT]

[+] EMBL AL932329             [GAAGGCAACGGTTCTCTGCGGGAAACGGGGCTGTGATACGCGCGTACGAACGGGCACAGAAGTGCGGATATCTAATCTGCTGGCATTCGATCGACACTTTACGCACGGGCTGCGGTGGCGGGT]


>consensus_7730#5 GAAGGCAACGGTTCTCTGCGGGAAACGGGGCTGTGATACGCGCGTACGAACGGGCACAGA AGTGCGGATATCTAATCTGCTGGCATTCGATCGACACTTTACGCACGGGCTGCGGTGGCG GGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7730#0      ------------------------------------------------------------
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      CAGAATCCCGAGGTTTTTGTATAGATATTTGTTAACTGTCCCGTAAGAAANAACTTATAC 60
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      ------------------------------------------------------------
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      GCTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTA 120
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      ------------------------------------------------------------
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      CCTACAACTGGTAGGGGAAATTGACTACACCTTTNCCTCCCATACTGAACGGTAACAAGC 180
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      ------------------------------------------------------------
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      GATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACC 240
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      ------------------------------------------------------------
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      --------GATCGCCCCGAGGTNTAAACGGTACGTTTATTTTTGTACTAGATATTTGTTA 52
consensus_7730#2      GTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAACGATAGTACGAATGGCAGGCGTGAT 300
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      ---------------------------------CCGCCCACGCGTCCGCCTGCCTGCTGC 27
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      --------------------------------CAAGAATCCCCTGANGGT--TATGTGAT 26
consensus_7730#3      AACTGTCCCGGTAAGAAACAACTTATACGCTACAAAATCACACGCACGATATAATGTGAT 112
consensus_7730#2      TGGGAATTATAGTTCATAGCAGTAAGGAACACAATATAGGACTTCAACACACGTGCGTGC 360
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      GCCGAAGTGGTGGCAAACTGCCCGAAGGGTTCGTTGGCTGCGGTGGCGATGGGAAGGGTT 87
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      AGTGTTATGCTGACGATTACTACTGTCTACCTACAACTGGTAGTGGGAAATAGACAACAC 86
consensus_7730#3      AGGTTTA-GCTGACGATTACTACTATTTACCTACAACTGGGTAGGGGAAATTGACTACAC 171
consensus_7730#2      GTGCGTGCATAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGC 420
consensus_7730#4      ------CGACCCACGCGTCCGGACACGGTGTGATCGAATCACGAAGAAATTAGACGATGC 54
                                                                                  

consensus_7730#0      CGTGCGACATCGAGGACGTACCGAACG-GGTGCTTCCTGGCAGGAAACGGGGCCGGTGGT 146
consensus_7730#5      ----------------------GAAGGCAACGGTTCTCTGCGGGAAACGGGGCTG----T 34
consensus_7730#1      CCTTTCCCTACCCACACTGAACGGTAACAAGCGATGTAAATATAAATCATGA-TGCATAT 145
consensus_7730#3      CCTTTCCCT-CCCATACTGAACGGTAACAAGCGATGTAAATATAAATCATGA-TGCAT-T 228
consensus_7730#2      CNTATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGA----GCGTTTTCCGAT 476
consensus_7730#4      CATATGTTACTATATTATTGATGTTGTCTTCCGATTTCGGAGGA----GCGTTTTCCGAT 110
                                            *           *               *        *

consensus_7730#0      GATACGGCACGTGACGAAGCGGGCCACAAGAAGGTGGC---CGGATATCTGAATCTGCTG 203
consensus_7730#5      GATACG-CGCGT-ACGAA-CGGGC---ACAGAAGTG-----CGGATATCT-AATCTGCTG 82
consensus_7730#1      GAAAGAGAGCCCTAAGAG-AGAACGATTCTGAACTGTCTTTCACAAATTNAAGTTAGTTT 204
consensus_7730#3      GAAAGAGAGCGCCAAGAG-AGAACGATTCTGAACCGTCTTTCA-AAATTCAAGTTAGTT- 285
consensus_7730#2      AAAAGTAAACAATTACTTCAGCAA-ACTTTGTNATACTTTGCAATTTATTCAAAAAACC- 534
consensus_7730#4      AAAAGTAAACAATTACTTCAGCAA-ACTTTGTAATACTTTGCAATTTATTCAAAAAACC- 168
                       * *     *          *                    *         *        

consensus_7730#0      GCCAATTCGATCGACAACTTTACGCACGGGCTG-GCGGTGGCGGGTTCGTTCCTGGTCTC 262
consensus_7730#5      GC--ATTCGATCGACA-CTTTACGCACGGGCTG--CGGTGGCGGGT-------------- 123
consensus_7730#1      GCTNATTTG--CAGTAAAGATACGTAAGAATTGTGCAGTGCTGTGCATTTGGCAANTTCA 262
consensus_7730#3      GCTAATTG----AGTAA-GATA-GTAGAA--TG-GCAG----GCGTGATTGGAAATT--A 330
consensus_7730#2      ACTCCTCTCACGCGCAACAAAACAGACTCNATG---AATGGTAG---------------- 575
consensus_7730#4      ACTCCTCTCACGCGCAACAAAACAGACTCAATG---AATGGTAGTTAGACGGTGTGTGTG 225
                       *   *         *     *   *     **                           

consensus_7730#0      GCTAC-AGCACGGCCTACTGGCTACGTTTGCCATTTTGTTGCACGAAATTCCGCACGAAG 321
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      TANGT-TAATNAGCAAGTAAAGTGAACAGGATATAGTGACTC-CAACCCACTGTTGCGTG 320
consensus_7730#3      TCAGT-TAATA-GCCAGTAAGG--AACAA-ATATCAGGACTCTCAACACACG--TGCGTG 383
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      TGTGTCTAGCAAACTAGTCGGATTGAATTTTTACCGAACTACCAATCCTCCCCTTCTGTG 285
                                                                                  

consensus_7730#0      TGGGCGACTTTGCGATCCTGCTCCGGTCCGGATTTAGCCGCTGGGATGCGGCCAAGGCGC 381
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CGTGCGTTGCCATAGTCGCTAGCAGCCCAGGGAACCACGGGTTGTTGGAATACGAAATTA 380
consensus_7730#3      CGTAGCGTAGCATAG--GCT--CAGCCCAGGGA-CAACCGNGGGTCGGTTTGCAAATTCC 438
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      AAGCAATTATTACTGTAACGTGTATCTGTAAATTCCAACATTTCTCAATTTGTA------ 339
                                                                                  

consensus_7730#0      AGCTTCTAACCGCCGGGGCCGGTTTGCTCGGTGCGCTGGTGGCGATCGGTGGTAGCGGTG 441
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CACACGGACACNGCAACATATCAAGAACAGAAATTGGACCNATAAATTGGTAANACCTAA 440
consensus_7730#3      C---CGGA---AGAAATTTCCCAACCGGGGAAACACGGGANACAAGC-----ACGTTTCT 487
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      CTACGACGGCGCTGGAAGCAAAAACCTCCTGGATTGCACCGTTCACTGCCGGTGGCTTTC 501
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      TAAATACACATANAGGAATAGGTAAGGTCCNTACAACCCGGCATACATCCNGANGAGGGA 500
consensus_7730#3      CAAAGGAAACTCGGNAAAT---TTGGTCCCCCACATTC------ACATTCAGGCTTCGCT 538
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      TGCACATTGCACTCGTGACGGTGCTGCCGGATCTGCTGGACGAGTCGAGCCCGTGGGAAT 561
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CGGCNNGTTATTAACCNCCGCATNAAAAAAANGNTCAACCACACAAACATNAACCTCTCA 560
consensus_7730#3      NAACCT------------------------------------------------------ 544
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      CGTTCAAGCAGTTTGCCGCCCTGCTGCTCGGCATCGGATTAATGGCGTTCATGACCATTT 621
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CAAGCAAACAACCTTNCTGGCCAAATAAAGCTTAATGACCATACANAAAGTTANACACAN 620
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      ATCTAGAACATTAGGGTTTATGGTAATAGTGCAAGGTACATTTCAAGGCTGGCTGGTTTC 681
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CAANCACANAACGCCACNCGTCCCGNACANTNCAAGCGGNCAGGNCCCAAAAGGACAAAC 680
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      CGGCGGCAAGTACACAGTACACGGTGTGCGTGGTTCGTTTGTTGCGTTGCGCATCGGAAA 741
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ANCACCAGGAAGGCNACCCAAAATNGGACAACTCGGGGCNACAAGCANACACAGNAAANA 740
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      CGGTACGTTTATTTTTGTATAGATATTTGTTAAACTGTCCCGTAAGAAACAACTTATACG 801
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      GGGGGCGGCTNAGGTATGGAAGGGTAGGGGTTAGNAACGCCCCAAAGCCGCTCAGCGCCA 800
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      CTACAAAATCACACGCACGATATAATGTGATAGGTTTAGCTGACGATTACTACTATTTAC 861
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CAAGAGGCACGNCAAAANAACACNGCCGAAAACCCNGNGAACNCNANCAGCCCCAANGGA 860
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      CTACAACTGGTAGGGGAAATTGACTACACCCTTTCCCTCCCATACTGAACGGTAACAAGC 921
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      CGACCANCCCAACGACCNNATNGGAGAAANACGCANGAGCACAATCANNG---------- 910
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      GATGTAAATATAAATCATGATGCATTGAAAGAGAGCGCCAAGAGAGAACGATTCTGAACC 981
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      GTCTTTCAAAATTAAGTTAGTTGCTAATTGAGTAAGATAGGTAGAATGGCAGGCGTGATT 1041
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      GGAAATTATAGTTAATAGCTGTAAGGAACAAATGTAGGACTTCAACACACGTGCGTGCGT 1101
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      GCGTGCGTGCGTAGGCTAGCAGGGACACGGTGTGATCGAATCACGAAGAAATTAGAAGAT 1161
consensus_7730#5      ------------------------------------------------------------
consensus_7730#1      ------------------------------------------------------------
consensus_7730#3      ------------------------------------------------------------
consensus_7730#2      ------------------------------------------------------------
consensus_7730#4      ------------------------------------------------------------
                                                                                  

consensus_7730#0      GCCATATGTTAATATATTATTGATGTTGTCTTCCGATTTCGGAGGAGCG 1210
consensus_7730#5      -------------------------------------------------
consensus_7730#1      -------------------------------------------------
consensus_7730#3      -------------------------------------------------
consensus_7730#2      -------------------------------------------------
consensus_7730#4      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)