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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7737#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1411 fasta sequence
[CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTGACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCTTCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGCAGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACCCCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAACATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAAACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGCTATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAATGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTAAACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAACACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCCAACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAACGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGATTGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTTCCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACTATATGCTTTAAGTTTAAAACAATCTATATCT]
[+] EMBL BX622197 [CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTGACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCTTCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGCAGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACCCCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAACATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAAACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGCTATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAATGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTAAACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGNGTAGCGTTTAAGCGTTAAGTGGGG AAATTAAGCAAACAAACCCGGTA ]
[+] EMBL BX610611 [ CACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAACACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCCAACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAAACAACCGAAAACGAGA ]
[+] EMBL BX610612 [ AACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAA ]
[+] EMBL BX610610 [ AACCACACGACAACAGAGTACGTGTTTATTATAGTAAAATTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAACACACCTACATAAACA ]
[+] EMBL BX614233 [ TAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGC ]
[+] EMBL BX613518 [ GCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCAAAACACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCCAACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAACGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGATTGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTTCCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACTATATGCTTTAAGTTTAAAACAATCTATATCT]
[+] EMBL BX614923 [ CAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGGTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAACGAGAGCAGAAAAACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGATTGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGGGCGAACAGCCGAACAACTATGTTCCATTTAATTTACCTGTACTTTTTTTT AATATTACAAACTGTCGTCTCCCCT ]
consensusID : consensus_7737#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 181 fasta sequence
[AGAGCGAAAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGCCATTCATGGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTATTTTCATTTTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCTC]
[+] EMBL BX615749 [AGAGCGAAAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGCCATTCATGGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTATTTTCATTTTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7737#0 CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTC 60
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 TCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTG 120
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 ACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCT 180
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 TCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGC 240
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 AGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACC 300
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 CCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAAC 360
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 ATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAA 420
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 ACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGC 480
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 TATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAA 540
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 TGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTA 600
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 AACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTT 660
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 TCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACC 720
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 CGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGT 780
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 ACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGA 840
consensus_7737#1 -----------------------------------------------------AGAGCGA 7
*******
consensus_7737#0 AAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCAT 900
consensus_7737#1 AAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGCCATTCAT 67
************** ****************************** ********* ****
consensus_7737#0 GGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATT 960
consensus_7737#1 GGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTATTTTCATT 127
********************** ************** ********* *** *******
consensus_7737#0 TTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAAC 1020
consensus_7737#1 TTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCTC------ 181
*** ********* ************* ******** ***************
consensus_7737#0 ACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCC 1080
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 AACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGA 1140
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 AGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAA 1200
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 CGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGAT 1260
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 TGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTT 1320
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 CCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACT 1380
consensus_7737#1 ------------------------------------------------------------
consensus_7737#0 ATATGCTTTAAGTTTAAAACAATCTATATCT 1411
consensus_7737#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||