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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_774#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence
[CCGCCCACGCGTCCGCGACTCGTCAAAATTACCCATTTCGGCCCCCCAGTGCGTGCGTGTGTGTGTGTGTGCGTGCACGTGTATCTATTTCCCGGTCTCGAACCCCGTAGTCCCGAGTCGTTACGATATTTCTGTGTCTGCAAGTCCTCGCGATCTCCAAAAAGGCCAGGCCAGTGTTTGGTGAATCACGCACGTGTCTCTTCGGAAGAATTCATTTTGGAAACGAGCCACTGATAAAGTAGACTACCGAGCGGGCTGCTTCAGTGTTGGTGTACTGTGTGTGTGTGTGCGTTTATTTGTTCGTTTGTGCGCGCGTTTATATGTGTGCTGTAGTTGTACCGGTGTGCCTCCCGTGGTTCCGTGCATTCCGTGTGTCGTACTGGTGGACCAGTTTCTAAGCCCCTTGTCCGAGCGAAGGATTAAGTCTCGATCTCGAGATCCAGAAGCGCCTTGGAATTGTTCAGCATCACTGACAACAGCGACCCCTGCAGAGCAACAGCAGCGAGCTACACATTTAGTAGACAAATCGAGATCAGATAGTAAAAGATGGCGTCAAATTTGGAGCAGTTTTCGGAGCTGGAGCTGTCGAAGGAGGATCGTGAGCAAATCTTCGACCCGCCGTTGGATGCGCCCAAAACACAGAATGGTGCCAGTACAACGGCCAAAATCGTCATCAGTGGTATA]
[+] EMBL BM595816 [CCGCCCACGCGTCCGCGACTCGTCAAAATTACCCATTTCGGCCCCCCAGTGCGTGCGTGTGTGTGTGTGTGCGTGCACGTGTATCTATTTCCCGGTCTCGAACCCCGTAGTCCCGAGTCGTTACGATATTTCTGTGTCTGCAAGTCCTCGCGATCTCCAAAAAGGCCAGGCCAGTGTTTGGTGAATCACGCACGTGTCTCTTCGGAAGAATTCATTTTGGAAACGAGCCACTGATAAAGTAGACTACCGAGCGGGCTGCTTCAGTGTTGGTGTACTGTGTGTGTGTGTGCGTTTATTTGTTCGTTTGTGCGCGCGTTTATATGTGTGCTGTAGTTGTACCGGTGTGCCTCCCGTGGTTCCGTGCATTCCGTGTGTCGTACTGGTGGACCAGTTTCTAAGCCCCTTGTCCGAGCGAAGGATTAAGTCTCGATCTCGAGATCCAGAAGCGCCTTGGAATTGTTCAGCATCACTGACAACAGCGACCCCTGCAGAGCAACAGCAGCGAGCTACACATTTAGTAGACAAATCGAGATCAGATAGTAAAAGATGGCGTCAAATTTGGAGCAGTTTTCGGAGCTGGAGCTGTCGAAGGAGGATCGTGAGCAAATCTTCGACCCGCCGTTGGATGCGCCCAAAACACAGAATGGTGCCAGTACAACGGCCAAAATCGTCATCAGTGGTATA]
consensusID : consensus_774#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence
[CCGGCGAAGGATTAAACTACGGATTCGTTTCGACTCGTCAAAATTACCCATTTCGGCCCCCCAGTGCGTGCGTTTGTGTGTGTGTGTGTGCGTGCACGTGTATCTATTTCCCGGTCTCGAACCCCGTAGTCCCGAGTCGTTACGATATTTTTGTGTCTGCAAGTCCTCGCGATCTCCAAAAAGGCCAGGCCAGTGTTTGGTGAATCACGCACGTGTCTCTTCGGAAGAATTCATTTTGGAAACGAGCCACTGATAAAGTAGACTACCGAGCGGGCTGCTTCAGTGTTGGTGTACTGTGTGTGTGTGCGTTTGTTTGTTCGTTTGTGCGCGCGTTTATATGTGTGCTGTAGTTGTACCGGTGTGCCTCCCGTGGTTCCGTGCATTCCGTGTGTCGTACTGGTGGACCAGTTTCTAAGCCCTTGTCCGAGCGAAGGATTAAGTCTCGATCTCGAGATCCAGAAGCACCTTGGAATTGTTCAGCATCACTGACAACAGCGACCTCCGCAGAGCAACAGCAGCGAGCTACACATTTAGTAGACAAATCGAGATCAGATAGTAAAAGATGGCGTCAAATTTGGAGCAGTT]
[+] EMBL BM579860 [CCGGCGAAGGATTAAACTACGGATTCGTTTCGACTCGTCAAAATTACCCATTTCGGCCCCCCAGTGCGTGCGTTTGTGTGTGTGTGTGTGCGTGCACGTGTATCTATTTCCCGGTCTCGAACCCCGTAGTCCCGAGTCGTTACGATATTTTTGTGTCTGCAAGTCCTCGCGATCTCCAAAAAGGCCAGGCCAGTGTTTGGTGAATCACGCACGTGTCTCTTCGGAAGAATTCATTTTGGAAACGAGCCACTGATAAAGTAGACTACCGAGCGGGCTGCTTCAGTGTTGGTGTACTGTGTGTGTGTGCGTTTGTTTGTTCGTTTGTGCGCGCGTTTATATGTGTGCTGTAGTTGTACCGGTGTGCCTCCCGTGGTTCCGTGCATTCCGTGTGTCGTACTGGTGGACCAGTTTCTAAGCCCTTGTCCGAGCGAAGGATTAAGTCTCGATCTCGAGATCCAGAAGCACCTTGGAATTGTTCAGCATCACTGACAACAGCGACCTCCGCAGAGCAACAGCAGCGAGCTACACATTTAGTAGACAAATCGAGATCAGATAGTAAAAGATGGCGTCAAATTTGGAGCAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_774#0 ------------CCGCCCACGCGTCCG---CGACTCGTCAAAATTACCCATTTCGGCCCC 45
consensus_774#1 CCGGCGAAGGATTAAACTACGGATTCGTTTCGACTCGTCAAAATTACCCATTTCGGCCCC 60
* *** * ** ******************************
consensus_774#0 CCAGTGCGTGCGT----GTGTGTGTGTGTGCGTGCACGTGTATCTATTTCCCGGTCTCGA 101
consensus_774#1 CCAGTGCGTGCGTTTGTGTGTGTGTGTGTGCGTGCACGTGTATCTATTTCCCGGTCTCGA 120
************* *******************************************
consensus_774#0 ACCCCGTAGTCCCGAGTCGTTACGATATTTCTGTGTCTGCAAGTCCTCGCGATCTCCAAA 161
consensus_774#1 ACCCCGTAGTCCCGAGTCGTTACGATATTTTTGTGTCTGCAAGTCCTCGCGATCTCCAAA 180
****************************** *****************************
consensus_774#0 AAGGCCAGGCCAGTGTTTGGTGAATCACGCACGTGTCTCTTCGGAAGAATTCATTTTGGA 221
consensus_774#1 AAGGCCAGGCCAGTGTTTGGTGAATCACGCACGTGTCTCTTCGGAAGAATTCATTTTGGA 240
************************************************************
consensus_774#0 AACGAGCCACTGATAAAGTAGACTACCGAGCGGGCTGCTTCAGTGTTGGTGTACTGTGTG 281
consensus_774#1 AACGAGCCACTGATAAAGTAGACTACCGAGCGGGCTGCTTCAGTGTTGGTGTACTGTGTG 300
************************************************************
consensus_774#0 TGTGTGTGCGTTTATTTGTTCGTTTGTGCGCGCGTTTATATGTGTGCTGTAGTTGTACCG 341
consensus_774#1 TGTGT--GCGTTTGTTTGTTCGTTTGTGCGCGCGTTTATATGTGTGCTGTAGTTGTACCG 358
***** ****** **********************************************
consensus_774#0 GTGTGCCTCCCGTGGTTCCGTGCATTCCGTGTGTCGTACTGGTGGACCAGTTTCTAAGCC 401
consensus_774#1 GTGTGCCTCCCGTGGTTCCGTGCATTCCGTGTGTCGTACTGGTGGACCAGTTTCTAAGCC 418
************************************************************
consensus_774#0 CCTTGTCCGAGCGAAGGATTAAGTCTCGATCTCGAGATCCAGAAGCGCCTTGGAATTGTT 461
consensus_774#1 C-TTGTCCGAGCGAAGGATTAAGTCTCGATCTCGAGATCCAGAAGCACCTTGGAATTGTT 477
* ******************************************** *************
consensus_774#0 CAGCATCACTGACAACAGCGACCCCTGCAGAGCAACAGCAGCGAGCTACACATTTAGTAG 521
consensus_774#1 CAGCATCACTGACAACAGCGACCTCCGCAGAGCAACAGCAGCGAGCTACACATTTAGTAG 537
*********************** * **********************************
consensus_774#0 ACAAATCGAGATCAGATAGTAAAAGATGGCGTCAAATTTGGAGCAGTTTTCGGAGCTGGA 581
consensus_774#1 ACAAATCGAGATCAGATAGTAAAAGATGGCGTCAAATTTGGAGCAGTT------------ 585
************************************************
consensus_774#0 GCTGTCGAAGGAGGATCGTGAGCAAATCTTCGACCCGCCGTTGGATGCGCCCAAAACACA 641
consensus_774#1 ------------------------------------------------------------
consensus_774#0 GAATGGTGCCAGTACAACGGCCAAAATCGTCATCAGTGGTATA 684
consensus_774#1 -------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||