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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7743#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1017 fasta sequence
[GACCCACGCGTCCGCCCACGCGTCCG---------AGCAAACTTTGGACTGGAAACGCTGTGAATATTAGCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAAAAAAAAAACAGCCCACAGTGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTG-TTGTTTTCCGTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCG-TTGTTATTTAGTTGCGTAGTACCAGTATAGTGCGTGTTCACGTGAGGCAGCAGGATGTTGGACCTATTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTAAGAGCGTCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTGGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGCAA-CTACGGGGC-GGACTTTGAGTTTGGGGCCGACTTCCGGCGCATCCTCGAGCGGGCGG-AAAAGTGGGGCCGGCAGCAGGCCACCATGCCGAAGCAGATGCGCAGCTACGAGGATTCGGCCAAATCGAAGAAAACGGTCGCCTCGATGATTGAGCGCAAGGGCGAGGAGAAGCCACCGGCCGGGGCGGGCAGTGGCAGCAAGAAGTCGGTCAAGATAGCGGAGAAGAAGAAGGCGGCGAGCGAGCTGCTGGCGGACAGTGACGGGATGGAGGCGCCCCGTTCACCCCGCTCCAACGGGAGCCCGCCCGAGCTGGGCGAGGATCTAATTATGGAGAGCCGCAAAAAGTTTGCGGAAAAGATGAAGGGTGGCAGCGGTGGCGGCGGCAAGGGTAGCAAGCTGGAGAAGCAAAAGTCGC]
[+] EMBL BM632219 [GACCCACGCGTCCGCCCACGCGTCCGCGCCAACACAGCAAACTTTGGACTGGAAACGCTGTGAATATTAGCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACC AAAAAAAACAGCCCACAGTGCAAAAGTATTCGCACGCACGATACCGCACGCCATTGTTGCCATTTGTTG TTGTTTTCCGTTTTCCATTTGATATTACGTAGTATTTTACGGTGCTTTGTTTTGCCCAGACCCAGACCGAGGCG TTGTTATTTACTTGCGTAGGACCAGTATAGTGCGTGTTCACGTGAGGCAACATGATGTTGGACCTATTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCATCACCAACCAGCTCTTTGCCCCGCCAATAAATGCGCTTATTAAAAGCGTCATCCTACAGGAACGTTCCGGCGAGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTGGTGTTTGTGGTCACGTTCCAGAACATACTGCAGCTCTC ]
[+] EMBL BM593736 [ CCGCCCACGCGTCCG AGCAAACTTTGGACTGGAAACGCTGTGAATATTAGCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAAAAAAAAAACAGCCCACAGTGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTG TTGTTTTCCGTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCG TTGTTATTTAGTTGCGTAGTACCAGTATAGTGCGTGTTCACGTGAGGCAGCAGGATGTTGGACCTATTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTAAGAGCGTCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTGGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGCAA CTACGGGGC GGACTTTGAGTTTGGGGCCGACTTCCGGCGCATCCTCGAGCGGGCGG AAAAGTGGGGt ]
[+] EMBL BM631762 [ ccgGCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAAAAAAAAAACAGCCCACAGTGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTG TTGTTTTCCGTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCG TTGTTATTTAGTTGCGTAGTACCAGTATAGTGCGTGTTCACGTGAGGCAGCAGGATGTTGGACCTATTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCCCCGTCAGTAAATGTGCTTATTAAGAGCGTCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTGGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGCAA CTACGGGGC GGACTTTGAGTTTGGGGCCGACTTCCGGCGCATCCTCGAGCGGGCGG AAAAGTGGGGCCGGCAGCAGGCCACCATGCCGAAGCAGATGCGCAGCTACGAGGATTCGGCCAAATCGAAGAAAACGG ]
[+] EMBL BM612513 [ ccgCGCCATTGTTGCCATTTGTTGTTTGTTTTCCGTTTTGCATTTGTTATTAGGTAGGGTTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCGTTTGTTATTTAGTTGCGTAGTACCAGTATAGTGCGTGTTCACGTGAGGCAGCAGGATGTTGGACCTGTTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCACCGTCAGTAAATGCGCTAATTAAGAGCGTCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTGGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCGTACATCGACAAGTTTCTGAGCGATGTGCATCTGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTCGACAATCGCAACCTACGGGGCGGGACTTTGAGTTCGGGGCCGACTTCCGGCGCATCCTCGAGCGGGCGGAAAAAGTGGGGCCGGCAGCAGGCCACCATGCCGAAGCAGATGCGCAGCTACGAGGATTCGGCCAAATCGAAGAAAACG ]
[+] EMBL BM617129 [ ccgCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTGGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGCAA CTACGGGGC GGACTTTGAGTTTGGGGCCGACTTCCGGCGCATCCTCGAGCGGGCGG AAAAGTGGGGCCGGCAGCAGGCCACCATGCCGAAGCAGATGCGCAGCTACGAGGATTCGGCCAAATCGAAGAAAACGGTCGCCTCGATGATTGAGCGCAAGGGCGAGGAGAAGCCACCGGCCGGGGCGGGCAGTGGCAGCAAGAAGTCGGTCAAGATAGCGGAGAAGAAGAAGGCGGCGAGCGAGCTGCTGGCGGACAGTGACGGGATGGAGGCGCCCCGTTCACCCCGCTCCAACGGGAGCCCGCCCGAGCTGGGCGAGGATCTAATTATGGAGAGCCGCAAAAAGTTTGCGGAAAAGATGAAGGGTGGCAGCGGTGGCGGCGGCAAGGGTAGCAAGCTGGAGAAGCAAAAGTCGC]
[+] EMBL AL692946 [ CGAGCTAGTGTTTGTGGTCGCGT CAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGCAA CTACGGGGC GGACTTTG ]
consensusID : consensus_7743#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 598 fasta sequence
[CCGCAATGTTATCGCCAACACAGCAAACTTTGGACTGGAAACGCTGTGAATATTAGCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAACAAAAAAACAGCCCACAGTGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTGTTGTTTTCCGTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCGTTGTTATTTAGTTGCGTAGTACCAGTATTGTGCGTGTTCACGTGAGGCAGCAGGATGTTGGACCTGTTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTAAGAGCGTCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTAGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGC]
[+] EMBL BM634491 [CCGCAATGTTATCGCCAACACAGCAAACTTTGGACTGGAAACGCTGTGAATATTAGCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAACAAAAAAACAGCCCACAGTGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTGTTGTTTTCCGTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCGTTGTTATTTAGTTGCGTAGTACCAGTATTGTGCGTGTTCACGTGAGGCAGCAGGATGTTGGACCTGTTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTAAGAGCGTCATCCTACAGGAACGTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCGAGCTAGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTCTGAGCGATGTGCATCTGGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAATCGC]
[+] EMBL AGA282439 [ ATTGTTGCCATTTGTTGCTGTTTTCCGTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCGAGGCGTTGTTATTTAGTTGCGTATTACCAGTATTGTGCGTGTTCACGTGAGGCAGCACGATGTTGGACCTGTTCACGATCTTCACCAATGGTGGCATCGTGCTGTGGTGCTTCCGCAGCACCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTATCAGCGTCATCCTACAGGAACGTTCCGGCGTGTACTATCACCATGGCCTGTCGCTCCAGTAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7743#0 GACCCACGCGTCCGCCCACGCGTCCGAGCAAACTTTGGACTGGAAACGCTGTGAATATTA 60
consensus_7743#1 CCGCAATGTTATCGCCAACAC-----AGCAAACTTTGGACTGGAAACGCTGTGAATATTA 55
* * * **** ** * **********************************
consensus_7743#0 GCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAAAAAAAAAACAGCCCACAG 120
consensus_7743#1 GCTGAGAAAAGGGTCGTGTTTTTTCTTTCCCAGCAGGACCAACAAAAAAACAGCCCACAG 115
****************************************** *****************
consensus_7743#0 TGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTGTTGTTTTCC 180
consensus_7743#1 TGCAAAAGTATTCGCACGCACGAGACCGCACGCCATTGTTGCCATTTGTTGTTGTTTTCC 175
************************************************************
consensus_7743#0 GTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCG 240
consensus_7743#1 GTTTTCCATTTGTTATTAGGTAGTATTTTACGTTGTTTTGTTTTGCCCAGACCCAGACCG 235
************************************************************
consensus_7743#0 AGGCGTTGTTATTTAGTTGCGTAGTACCAGTATAGTGCGTGTTCACGTGAGGCAGCAGGA 300
consensus_7743#1 AGGCGTTGTTATTTAGTTGCGTAGTACCAGTATTGTGCGTGTTCACGTGAGGCAGCAGGA 295
********************************* **************************
consensus_7743#0 TGTTGGACCTATTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCA 360
consensus_7743#1 TGTTGGACCTGTTCACGATCTTCACCAAGGGTGGCATCGTGCTGTGGTGCTTCCGCAGCA 355
********** *************************************************
consensus_7743#0 CCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTAAGAGCGTCATCCTACAGGAAC 420
consensus_7743#1 CCAACCAGCTCTTTGCCCCGTCAGTAAATGCGCTTATTAAGAGCGTCATCCTACAGGAAC 415
************************************************************
consensus_7743#0 GTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCG 480
consensus_7743#1 GTTCCGGCGTGTACGATCACGATGGCCTGTCGCTCCAGTACAAGCTGGACAACGAGTTCG 475
************************************************************
consensus_7743#0 AGCTGGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTC 540
consensus_7743#1 AGCTAGTGTTTGTGGTCGCGTTCCAGAAGATACTGCAGCTCTCCTACATCGACAAGTTTC 535
**** *******************************************************
consensus_7743#0 TGAGCGATGTGCATCTGG-AGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAAT 599
consensus_7743#1 TGAGCGATGTGCATCTGGGAGTTTCGCGACCGGTACAAGAACGATCTGCGCGTGGACAAT 595
****************** *****************************************
consensus_7743#0 CGCAACTACGGGGCGGACTTTGAGTTTGGGGCCGACTTCCGGCGCATCCTCGAGCGGGCG 659
consensus_7743#1 CGC--------------------------------------------------------- 598
***
consensus_7743#0 GAAAAGTGGGGCCGGCAGCAGGCCACCATGCCGAAGCAGATGCGCAGCTACGAGGATTCG 719
consensus_7743#1 ------------------------------------------------------------
consensus_7743#0 GCCAAATCGAAGAAAACGGTCGCCTCGATGATTGAGCGCAAGGGCGAGGAGAAGCCACCG 779
consensus_7743#1 ------------------------------------------------------------
consensus_7743#0 GCCGGGGCGGGCAGTGGCAGCAAGAAGTCGGTCAAGATAGCGGAGAAGAAGAAGGCGGCG 839
consensus_7743#1 ------------------------------------------------------------
consensus_7743#0 AGCGAGCTGCTGGCGGACAGTGACGGGATGGAGGCGCCCCGTTCACCCCGCTCCAACGGG 899
consensus_7743#1 ------------------------------------------------------------
consensus_7743#0 AGCCCGCCCGAGCTGGGCGAGGATCTAATTATGGAGAGCCGCAAAAAGTTTGCGGAAAAG 959
consensus_7743#1 ------------------------------------------------------------
consensus_7743#0 ATGAAGGGTGGCAGCGGTGGCGGCGGCAAGGGTAGCAAGCTGGAGAAGCAAAAGTCGC 1017
consensus_7743#1 ----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||