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Anopheles gambiae
cluster # 7746 cluster # 7746       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7746#0 length = 1031 sequences # 7  
consensus_7746#1 length = 762 sequences # 1  

consensusID : consensus_7746#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1031
fasta sequence
                              [CGACATCCAACAGCTGCCTGCGAACGGGTGAGAGTTTTGGTGCGTTGCTTGCAGGCATAGAATACGCGCCACTGTGTCCGCCGGGCGATGGGCTG-AATCAGGTTGATGTTGGTGTGTGGTGCATGAGGCTAGGATGGAGTTCTTCTTCTAAAATGTTTTAAACATTTTGCACAAATCTGACTAAAACCCCACTGTAACTTTATCTTCAATGCTGTCCAGTCCCAGTTTCATTCACCCCCGAAATCTCAAGTGCTTGTCCCGTTTTCTCATTATCACGTCTCCATCCCCAATGGTGGTGGTGGTGGGTTTGTCGCAACGGACGCGTGCCACAGGGAGGGTAGTAGTAGTCGGCCGTCGTGGTGGTGGTAGAGTGGCGCGAATTTAATTTATCACTTCGAGTGCGGCACCGCCACGCAAACAATGAGACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGGATCTGCTCGTCACATCGTGTTTTCTCGCTTACACTACAGCATCGAACCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACAACACCACCAGTACAGCGCGACGCTTTGCCGGAGATGGTTGTGCGTGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCGTTATAAGTCTCGTGCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAGAG-GCAACGCAGATTG-TCGACAAGTTTCCCGCA-GCCTGGCTCGACCCGGTATGACGTCATTGGATTCTACATGTGTACTTTAGTGTGTACTTTTTGTTTCAATAAAGTGTGGAATGTAATAAAAAAAAAAAA]

[+] EMBL CNS08KSQ             [CGACATCCAACAGCTGCCTGCGAACGGGTGAGAGTTTTGGTGCGTTGCTTGCAGGCATAGAATACGCGCCACTGTGTCCGCCGGGCGATGGGCTG AATCAGGTTGATGTTGGTGTGTGGTGCATGAGGCTAGGATGGAGTTCTTCTTCTAAAATGTTTTAAACATTTTGCACAAATCTGACTAAAACCCCACTGTAACTTTATCTTCAATGCTGTCCAGTCCCAGTTTCATTCACCCCCGAAATCTCAAGTGCTTGTCCCGTTTTCTCATTATCACGTCTCCATCCCCAATGGTGGTGGTGGTGGGTTTGTCGCAACGGACGCGTGCCACAGGGAGGGTAGTAGTAGTCGGCCGTCGTGGTGGTGGTAGAGTGGCGCGAATTTAATTTATCACTTCGAGTGCGGCACCGCCACGCAAACAATGAGACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGGATCTGCTCGTCACATCGTGTTGTCTCGCTTACACTACAGCATCGAACCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACAACACCACCAGTACAGCGCGACGCTTTGCCGGAGATGGTTGTGCGTGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCGTTATAAGTCTCGTGCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAGAG GCAACGCAGATTGTTCGACA                                                                                                               ]
[+] EMBL CNS09I62             [                CCTGCGAACGGGTGAGAGTTTTGGTGCGTTGCTTGCAGGCATAGAATACGCGCCACTGTGTCCGCCGGGCGATGGGCTGTAATCAGGTTGATGTTGGTGTGTGGTGCATGAGGCTAGGATGGAGTTCTTCTTCTAAAATGTTTTAAACATTTTGCACAAATCTGACTAAAACCCCACTGTAACTTTATCTTCAATGCTGTCCAGTCCCAGTTTCATTCACCCCCGAAATCTCAAGTGCTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08KSR             [                                                                                                                                                                                                              taAATGCTGTCCAGTCCCAGTTTAATTCACCCCCGAATTCTCAAGTGCTTGTCCCGTTTTCTCATTATCACGTCTCCATCCCCAATGGTGGTGGTGGTGGGTTTGTCGCAACGGACGCGTGCAACAGGGAGGGTAGTAGTAGTCGGCCGTCGTGGTGGTGGTAAAGTGGCGCGAATTTAATTTATCACTTCGAGTGCGGCACCGCCACGCAAACAATGAGACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTAAACGCGCGCTTCACTAACACCAATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGGATCTGCTCGTCACATCGTGTTTTCTCGCTTACACTACAGCATCGAACCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACAACACCACCAGTACAGCGCGACGCTTTGCCGGAGATGGTTGTGCGTGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCGTTATAAGTCTCGTGCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGAACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAGAG GCAACGCAGATTG TCGACAAGTTTCCCGCA GCCTGGCTCGACCCGGTATGACGTCATTGGATTCTACATGTGTACTTTAGTGTGTACTTTTTGTTTCAATAAAGTGTGGAATGTAATAAAAAAAAAAAA]
[-] EMBL CNS09I63             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGGATCTGCTCGTCACATCGTGTTTTCTCGCTTACACTACAGAATCGAACCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACAACACCACCAGTACAGCGCGACGCTTTGCCGGAGATGGTTGTGCGTGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCGTTATAAGTCTCGTGCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAAAAGAGAGCAACGCAGATTG TCGAAAAGTTTCCCGCATGCCTGGCT                                                                                           ]
[+] EMBL BX610790             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCGTTATAAGTCTCGTTCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAGAG GCAACGCAGATTG TCGACAAGTTTCCCGCA GCCTGGCTCGACCCGGTATGACGTCATTGGATTCTACATGTGTA                                                       ]
[+] EMBL BX610791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGTCCCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCGTTATAAGTCTCGTTCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACA                                                                                                                                       ]
[+] EMBL BX610789             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGCGCGCAGTGTTTGTGCATTGATGCGCATTTCTTTATAAGTCTCGTTCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAGAG GCAACGCAGATTG TCGACAAGTTTCCCGCA GCCTGGCTCGACCCGGTATGACGTCATTGGATTCTACATGTGTACTTTAGTGTGTACTTTATGTTTCAATAAAGTGT                      ]


>consensus_7746#0 CGACATCCAACAGCTGCCTGCGAACGGGTGAGAGTTTTGGTGCGTTGCTTGCAGGCATAG AATACGCGCCACTGTGTCCGCCGGGCGATGGGCTGAATCAGGTTGATGTTGGTGTGTGGT GCATGAGGCTAGGATGGAGTTCTTCTTCTAAAATGTTTTAAACATTTTGCACAAATCTGA CTAAAACCCCACTGTAACTTTATCTTCAATGCTGTCCAGTCCCAGTTTCATTCACCCCCG AAATCTCAAGTGCTTGTCCCGTTTTCTCATTATCACGTCTCCATCCCCAATGGTGGTGGT GGTGGGTTTGTCGCAACGGACGCGTGCCACAGGGAGGGTAGTAGTAGTCGGCCGTCGTGG TGGTGGTAGAGTGGCGCGAATTTAATTTATCACTTCGAGTGCGGCACCGCCACGCAAACA ATGAGACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCAC GGAGAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACC AATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGA GCTCACCAACTTGGATCTGCTCGTCACATCGTGTTTTCTCGCTTACACTACAGCATCGAA CCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACAACACCACCAGTACAGCGCGACGC TTTGCCGGAGATGGTTGTGCGTGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTG ATGCGCATTTCGTTATAAGTCTCGTGCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATA AACAGTGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAG AGGCAACGCAGATTGTCGACAAGTTTCCCGCAGCCTGGCTCGACCCGGTATGACGTCATT GGATTCTACATGTGTACTTTAGTGTGTACTTTTTGTTTCAATAAAGTGTGGAATGTAATA AAAAAAAAAAA



consensusID : consensus_7746#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 762
fasta sequence
                              [ATTGCCACTGTACGGTTTTCATATGCAGGTGAAAAGCAGTCTCGGGCCAGAGCAGTGCATATTCCCCAAAACCAAAGTGTGCCATTTTCCGGGTCAGGGGTCCAAAATTCGCCAACCAAACTAGTGCCACTATCCTGGGACGTAGCTTAGGTATCGAGTGATGCAACGTTGGGCGGAGTGCAGTAATCACACGCAGCGCCATTTGACCACAAAACTTGTGGCCTCACGCTAACGGAGCTCGGTGGTGCAAATTCCAATATGGCGGCCTGCTCGCTCCATTTGCTCGCTCACACGCTGGGAACCCATGGTCACCGAAATCGCCACCGCCGATCATCATCATCATCATCATCATCACTCTTCGCGGACCACTCAGCGCGCGCCCGAGGACCGCTCACCAATACCGATACACCAGTCCGAGAGCGATTTCAGCTCCGCTGTGGCATGGTGTGTGCGTGCCACGCAAACAATGAGACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGGATCTGCTCGTCACATCGTGTTGTCTCGCTTACACTACAGCATCGAANCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACNACACCACCAGTACAGCGCG]

[+] EMBL BX627149             [ATTGCCACTGTACGGTTTTCATATGCAGGTGAAAAGCAGTCTCGGGCCAGAGCAGTGCATATTCCCCAAAACCAAAGTGTGCCATTTTCCGGGTCAGGGGTCCAAAATTCGCCAACCAAACTAGTGCCACTATCCTGGGACGTAGCTTAGGTATCGAGTGATGCAACGTTGGGCGGAGTGCAGTAATCACACGCAGCGCCATTTGACCACAAAACTTGTGGCCTCACGCTAACGGAGCTCGGTGGTGCAAATTCCAATATGGCGGCCTGCTCGCTCCATTTGCTCGCTCACACGCTGGGAACCCATGGTCACCGAAATCGCCACCGCCGATCATCATCATCATCATCATCATCACTCTTCGCGGACCACTCAGCGCGCGCCCGAGGACCGCTCACCAATACCGATACACCAGTCCGAGAGCGATTTCAGCTCCGCTGTGGCATGGTGTGTGCGTGCCACGCAAACAATGAGACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGAAACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATACAAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGGATCTGCTCGTCACATCGTGTTGTCTCGCTTACACTACAGCATCGAANCATCGCTCCGTATGTCCCCCCCCTCCTACGCGTACNACACCACCAGTACAGCGCG]


>consensus_7746#1 ATTGCCACTGTACGGTTTTCATATGCAGGTGAAAAGCAGTCTCGGGCCAGAGCAGTGCAT ATTCCCCAAAACCAAAGTGTGCCATTTTCCGGGTCAGGGGTCCAAAATTCGCCAACCAAA CTAGTGCCACTATCCTGGGACGTAGCTTAGGTATCGAGTGATGCAACGTTGGGCGGAGTG CAGTAATCACACGCAGCGCCATTTGACCACAAAACTTGTGGCCTCACGCTAACGGAGCTC GGTGGTGCAAATTCCAATATGGCGGCCTGCTCGCTCCATTTGCTCGCTCACACGCTGGGA ACCCATGGTCACCGAAATCGCCACCGCCGATCATCATCATCATCATCATCATCACTCTTC GCGGACCACTCAGCGCGCGCCCGAGGACCGCTCACCAATACCGATACACCAGTCCGAGAG CGATTTCAGCTCCGCTGTGGCATGGTGTGTGCGTGCCACGCAAACAATGAGACCCCAAAT TTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGAAACGCGCTG CGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATACAAATACCGT GCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCACCAACTTGG ATCTGCTCGTCACATCGTGTTGTCTCGCTTACACTACAGCATCGAANCATCGCTCCGTAT GTCCCCCCCCTCCTACGCGTACNACACCACCAGTACAGCGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7746#0      ------------------CGACATCCAACAGCTGCCTGCGAACGGGTGAGAGTTTTGGTG 42
consensus_7746#1      ATTGCCACTGTACGGTTTTCATATGCAGGTGAAAAGCAGTCTCGGGCCAGAGCAGTG-CA 59
                                          * ** **   *           ****  ****   **   

consensus_7746#0      CGTTGCTTGCAGGCATAGAATACGCGCCACTGTGTCCGCCGGGCGATGGGC-TGAATCAG 101
consensus_7746#1      TATTCCCCAAAACCAAAGTGTGCCATTTTCCGGGTCAGGGGTCCAAAATTCGCCAACCAA 119
                        ** *    *  ** **  * *      * * *** *  *  * *    *   ** ** 

consensus_7746#0      GTTGATGTTGGTGTGTGGTGCATGAGGCTAGG-ATGGAGTTCTTCTTC------TAAAAT 154
consensus_7746#1      ACTAGTGCCACTATCCTGGGACGTAGCTTAGGTATCGAGTGATGCAACGTTGGGCGGAGT 179
                        *  **    * *   * *    **  **** ** ****  * *  *         * *

consensus_7746#0      GTTTTAA--ACATTTTGCACAAATCTGACTAAAACCCCACTGTAACTTTATCTT--CAAT 210
consensus_7746#1      GCAGTAATCACACGCAGCGCCA-TTTGACCACAAAACT--TGTGGCCTCACGCTAACGGA 236
                      *   ***  ***    ** * * * **** * **  *   ***  * * *   *  *   

consensus_7746#0      GCTGTCCAGTCCCAGTTTCATT----CACCCCCGAAATCTCAAGTGCTTGTCC-CGTTTT 265
consensus_7746#1      GCTCGGTGGTGCAAATTCCAATATGGCGGCCTGCTCGCTCCATTTGCTCGCTCACACGCT 296
                      ***     ** * * ** ** *    *  **         **  **** *  * *    *

consensus_7746#0      -----CTCATTATCAC----GTCTCCATCCCCAATGGTGGTGGTGGTGGGTTTGTCGCAA 316
consensus_7746#1      GGGAACCCATGGTCACCGAAATCGCCACCGCCGATCATCATCATCATCA--TCATCATCA 354
                           * ***  ****     ** *** * ** **  *  *  *  *    *  **   *

consensus_7746#0      CGGA-CGCGTGCCACAGGGAGGGTAGTAGTAGTCGGCCGTCGTGGTGGTGGTAGAGTGGC 375
consensus_7746#1      CTCTTCGCGGACCACTCAGCGCGCGCCCGAGGACCGCTCAC-CAATACCGATACACCAGT 413
                      *    ****  ****   * * *     *  * * **   *    *   * ** *   * 

consensus_7746#0      GCGAATTTAATTTATCACTTCGAGTGCGGCAC----------CGCCACGCAAACAATGAG 425
consensus_7746#1      CCGAGAGCGATTT--CAGCTCCGCTGTGGCATGGTGTGTGCGTGCCACGCAAACAATGAG 471
                       ***     ****  **  **   ** ****            *****************

consensus_7746#0      ACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGA 485
consensus_7746#1      ACCCCAAATTTTGAGTGATTCAGGCCGAGGGGTATGAGGAAGCTTGAGGAAGCACGGAGA 531
                      ************************************************************

consensus_7746#0      AACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATAC 545
consensus_7746#1      AACGCGCTGCGATGAGAGTTCGCATTCTGTTTTACACGCGCGCTTCACTAACACCAATAC 591
                      ************************************************************

consensus_7746#0      AAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCA 605
consensus_7746#1      AAATACCGTGCTTTGACGAGCCGTCTGTGAATGTGTGTGTGTCTTCTTTCAGCGAGCTCA 651
                      ************************************************************

consensus_7746#0      CCAACTTGGATCTGCTCGTCACATCGTGTTTTCTCGCTTACACTACAGCATCGAACCATC 665
consensus_7746#1      CCAACTTGGATCTGCTCGTCACATCGTGTTGTCTCGCTTACACTACAGCATCGAANCATC 711
                      ****************************** ************************ ****

consensus_7746#0      GCTCCGTATGTCCCCCCCCTCCTACGCGTACAACACCACCAGTACAGCGCGACGCTTTGC 725
consensus_7746#1      GCTCCGTATGTCCCCCCCCTCCTACGCGTACNACACCACCAGTACAGCGCG--------- 762
                      ******************************* *******************         

consensus_7746#0      CGGAGATGGTTGTGCGTGTTTTGTTCAAAGTCCCGCGCGCAGTGTTTGTGCATTGATGCG 785
consensus_7746#1      ------------------------------------------------------------
                                                                                  

consensus_7746#0      CATTTCGTTATAAGTCTCGTGCGCCGGTGTGTTTTGGTGAAGTGTGCAGTGAATAAACAG 845
consensus_7746#1      ------------------------------------------------------------
                                                                                  

consensus_7746#0      TGTGCACAGACGCACATGCAGTGCATGCATCGACAAGTAAGAATTTGATGAACAGAGGCA 905
consensus_7746#1      ------------------------------------------------------------
                                                                                  

consensus_7746#0      ACGCAGATTGTCGACAAGTTTCCCGCAGCCTGGCTCGACCCGGTATGACGTCATTGGATT 965
consensus_7746#1      ------------------------------------------------------------
                                                                                  

consensus_7746#0      CTACATGTGTACTTTAGTGTGTACTTTTTGTTTCAATAAAGTGTGGAATGTAATAAAAAA 1025
consensus_7746#1      ------------------------------------------------------------
                                                                                  

consensus_7746#0      AAAAAA 1031
consensus_7746#1      ------
                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)