cluster # 776

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Anopheles gambiae
cluster # 776 cluster # 776 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_776#0 length = 752 sequences # 1

consensus_776#1 length = 659 sequences # 1

consensusID : consensus_776#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 752
fasta sequence

                              [CCGGACTTCTAGTGCGAGCGCCGCCCTTTTTTTTTTTTTTTCCTTTGATCATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGTGTGTTTTGTGTAAATCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCACGTGTTGCTCCACGCACGTATAAAAAACAGCATTTCCAGTTCCCTTTCCTAGCCTATGATTTTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAGATTGAAACACACTCCCCTCTTTTGCTTTCAACTTCGTTCAAGTAGCAACAACAAACCCTTACACACACACACACACACACACCGACGACTACAAGTGGCAGTTTGATGATCGTTCAGCATGCTCACGGTGATCACGTGTGAGAGAGGTTCACTGTTACGTATATGTTTTGATTGCAATCTTGTTGATATTGGAACGCGTGGTTTGATGATTCTATTATTATTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGAAAAAAAGAGAGAGGGGGGGGGAGGGAGAACAAGAACAAAAACGCGCGCGCGCGCGCCAAAGGATCCCACTTTTAGAGCGAGAGATATACACATAAAAGGTCTTCTAAAGCCCCCCTGAGAGGGAGAAAGTGGGCACCGTTTCCAAAACTCTTGATTGGGAAACCCCCCTCTCTCCCGAGGGGG]

[+] EMBL BM618078             [CCGGACTTCTAGTGCGAGCGCCGCCCTTTTTTTTTTTTTTTCCTTTGATCATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGTGTGTTTTGTGTAAATCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCACGTGTTGCTCCACGCACGTATAAAAAACAGCATTTCCAGTTCCCTTTCCTAGCCTATGATTTTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAGATTGAAACACACTCCCCTCTTTTGCTTTCAACTTCGTTCAAGTAGCAACAACAAACCCTTACACACACACACACACACACACCGACGACTACAAGTGGCAGTTTGATGATCGTTCAGCATGCTCACGGTGATCACGTGTGAGAGAGGTTCACTGTTACGTATATGTTTTGATTGCAATCTTGTTGATATTGGAACGCGTGGTTTGATGATTCTATTATTATTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGAAAAAAAGAGAGAGGGGGGGGGAGGGAGAACAAGAACAAAAACGCGCGCGCGCGCGCCAAAGGATCCCACTTTTAGAGCGAGAGATATACACATAAAAGGTCTTCTAAAGCCCCCCTGAGAGGGAGAAAGTGGGCACCGTTTCCAAAACTCTTGATTGGGAAACCCCCCTCTCTCCCGAGGGGG]




>consensus_776#0
CCGGACTTCTAGTGCGAGCGCCGCCCTTTTTTTTTTTTTTTCCTTTGATCATTATGATAA
CTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGTGTGTTTTGTGT
AAATCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCACGTGTTGCTCCA
CGCACGTATAAAAAACAGCATTTCCAGTTCCCTTTCCTAGCCTATGATTTTCATTCATTG
CGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAGATTGAAACACA
CTCCCCTCTTTTGCTTTCAACTTCGTTCAAGTAGCAACAACAAACCCTTACACACACACA
CACACACACACCGACGACTACAAGTGGCAGTTTGATGATCGTTCAGCATGCTCACGGTGA
TCACGTGTGAGAGAGGTTCACTGTTACGTATATGTTTTGATTGCAATCTTGTTGATATTG
GAACGCGTGGTTTGATGATTCTATTATTATTCTATCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTACGAAAAAAAGAGAGAGGGGGGGGGAGGGAGAACA
AGAACAAAAACGCGCGCGCGCGCGCCAAAGGATCCCACTTTTAGAGCGAGAGATATACAC
ATAAAAGGTCTTCTAAAGCCCCCCTGAGAGGGAGAAAGTGGGCACCGTTTCCAAAACTCT
TGATTGGGAAACCCCCCTCTCTCCCGAGGGGG

consensusID : consensus_776#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence

                              [TGTGTCTACAATCTGTTACTAGCTATGAAACGGAGCTGGCGGAGGGTTACGACCGAACTGTTGCTAAAAACGTTCATAACGAAACGGGATGATCATTCTTCGCATTGGCAACACAGGCTGCTTGCTTACTCGGCAGCTACAAAAGGGGGGAAAGAAAACCGGGCATTTTGCGAGGAACGATGGATATCATTCCATCCTAAACACTACTACTTTTCCTACTCATAATCACTGCGCTATTTGGGATGGGGGGTTGTTTCCGCACACAACCGCACCATGATCACCTTTTGTCGTTTCTCTGAGCACTATATGTTGGGTACGCGTATGATCGTTTTTTTTCCTTTTTTTTTTTCTTCCTTTGATCATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGTGTGTTTTGTGTAAACCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCACGTGTTGCTCCACGTGCGTATAAAAAACAGCATTTCCAGTTCCTTTTCCTAGCTTATGATTTTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAGATTGAAACACACCCCCCTCTTTTGCTTTCAACTTCATTCAAGTAGCAACAACAAACCGG]

[-] EMBL BM648059             [TGTGTCTACAATCTGTTACTAGCTATGAAACGGAGCTGGCGGAGGGTTACGACCGAACTGTTGCTAAAAACGTTCATAACGAAACGGGATGATCATTCTTCGCATTGGCAACACAGGCTGCTTGCTTACTCGGCAGCTACAAAAGGGGGGAAAGAAAACCGGGCATTTTGCGAGGAACGATGGATATCATTCCATCCTAAACACTACTACTTTTCCTACTCATAATCACTGCGCTATTTGGGATGGGGGGTTGTTTCCGCACACAACCGCACCATGATCACCTTTTGTCGTTTCTCTGAGCACTATATGTTGGGTACGCGTATGATCGTTTTTTTTCCTTTTTTTTTTTCTTCCTTTGATCATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGTGTGTTTTGTGTAAACCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCACGTGTTGCTCCACGTGCGTATAAAAAACAGCATTTCCAGTTCCTTTTCCTAGCTTATGATTTTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAGATTGAAACACACCCCCCTCTTTTGCTTTCAACTTCATTCAAGTAGCAACAACAAACCGG]




>consensus_776#1
TGTGTCTACAATCTGTTACTAGCTATGAAACGGAGCTGGCGGAGGGTTACGACCGAACTG
TTGCTAAAAACGTTCATAACGAAACGGGATGATCATTCTTCGCATTGGCAACACAGGCTG
CTTGCTTACTCGGCAGCTACAAAAGGGGGGAAAGAAAACCGGGCATTTTGCGAGGAACGA
TGGATATCATTCCATCCTAAACACTACTACTTTTCCTACTCATAATCACTGCGCTATTTG
GGATGGGGGGTTGTTTCCGCACACAACCGCACCATGATCACCTTTTGTCGTTTCTCTGAG
CACTATATGTTGGGTACGCGTATGATCGTTTTTTTTCCTTTTTTTTTTTCTTCCTTTGAT
CATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGT
GTGTTTTGTGTAAACCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCAC
GTGTTGCTCCACGTGCGTATAAAAAACAGCATTTCCAGTTCCTTTTCCTAGCTTATGATT
TTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAG
ATTGAAACACACCCCCCTCTTTTGCTTTCAACTTCATTCAAGTAGCAACAACAAACCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_776#0      ------------------------------------------------------------
consensus_776#1      TGTGTCTACAATCTGTTACTAGCTATGAAACGGAGCTGGCGGAGGGTTACGACCGAACTG 60
                                                                                 

consensus_776#0      ------------------------------------------------------------
consensus_776#1      TTGCTAAAAACGTTCATAACGAAACGGGATGATCATTCTTCGCATTGGCAACACAGGCTG 120
                                                                                 

consensus_776#0      ------------------------------------------------------------
consensus_776#1      CTTGCTTACTCGGCAGCTACAAAAGGGGGGAAAGAAAACCGGGCATTTTGCGAGGAACGA 180
                                                                                 

consensus_776#0      ------------------------------------------------------------
consensus_776#1      TGGATATCATTCCATCCTAAACACTACTACTTTTCCTACTCATAATCACTGCGCTATTTG 240
                                                                                 

consensus_776#0      ------------------------------------------------------------
consensus_776#1      GGATGGGGGGTTGTTTCCGCACACAACCGCACCATGATCACCTTTTGTCGTTTCTCTGAG 300
                                                                                 

consensus_776#0      --------CCGGACTTCTAGTGCGAGCGCCGCCCTT---TTTTTTTTTTTTTCCTTTGAT 49
consensus_776#1      CACTATATGTTGGGTACGCGTATGATCGTTTTTTTTCCTTTTTTTTTTTCTTCCTTTGAT 360
                                *  * *  **  ** **      **   ********** **********

consensus_776#0      CATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGT 109
consensus_776#1      CATTATGATAACTACACTAAACCATAACGCACGCGTGCCTGTACGAGTTGTGTTGTCTGT 420
                     ************************************************************

consensus_776#0      GTGTTTTGTGTAAATCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCAC 169
consensus_776#1      GTGTTTTGTGTAAACCTAAAGGTTGATGGAACTTTTATTGCCTTTCTACCACACTAGCAC 480
                     ************** *********************************************

consensus_776#0      GTGTTGCTCCACGCACGTATAAAAAACAGCATTTCCAGTTCCCTTTCCTAGCCTATGATT 229
consensus_776#1      GTGTTGCTCCACGTGCGTATAAAAAACAGCATTTCCAGTTCCTTTTCCTAGCTTATGATT 540
                     *************  *************************** ********* *******

consensus_776#0      TTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAG 289
consensus_776#1      TTCATTCATTGCGAACATATTTGTGATTTCTATAAGTATTGTAAATGCTTTTGCCAGGAG 600
                     ************************************************************

consensus_776#0      ATTGAAACACACTCCCCTCTTTTGCTTTCAACTTCGTTCAAGTAGCAACAACAAACCCTT 349
consensus_776#1      ATTGAAACACACCCCCCTCTTTTGCTTTCAACTTCATTCAAGTAGCAACAACAAACCGG- 659
                     ************ ********************** *********************   

consensus_776#0      ACACACACACACACACACACACCGACGACTACAAGTGGCAGTTTGATGATCGTTCAGCAT 409
consensus_776#1      ------------------------------------------------------------
                                                                                 

consensus_776#0      GCTCACGGTGATCACGTGTGAGAGAGGTTCACTGTTACGTATATGTTTTGATTGCAATCT 469
consensus_776#1      ------------------------------------------------------------
                                                                                 

consensus_776#0      TGTTGATATTGGAACGCGTGGTTTGATGATTCTATTATTATTCTATCTCTCTCTCTCTCT 529
consensus_776#1      ------------------------------------------------------------
                                                                                 

consensus_776#0      CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGAAAAAAAGAGAGAGGGGGGGG 589
consensus_776#1      ------------------------------------------------------------
                                                                                 

consensus_776#0      GAGGGAGAACAAGAACAAAAACGCGCGCGCGCGCGCCAAAGGATCCCACTTTTAGAGCGA 649
consensus_776#1      ------------------------------------------------------------
                                                                                 

consensus_776#0      GAGATATACACATAAAAGGTCTTCTAAAGCCCCCCTGAGAGGGAGAAAGTGGGCACCGTT 709
consensus_776#1      ------------------------------------------------------------
                                                                                 

consensus_776#0      TCCAAAACTCTTGATTGGGAAACCCCCCTCTCTCCCGAGGGGG 752
consensus_776#1      -------------------------------------------