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Anopheles gambiae
cluster # 7767 cluster # 7767       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7767#0 length = 718 sequences # 6  
consensus_7767#1 length = 645 sequences # 2  

consensusID : consensus_7767#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 718
fasta sequence
                              [CCGCGGACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG---AAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG-GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG-ACGTGCCGAA-GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAGAGCGCGAGCGGGGCGTGATCCTGCGCGAGATGCAGGATGTCGAGAGCAACCTGCAAGAGGTGGTGTTTGACCATCTGCACGC]

[+] EMBL BM614128             [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAGAAAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAA GGCGGTCGAGATCCTG                                                                                                                             ]
[+] EMBL BM624638             [            CCGCCCACGCGTCCGCCCACGCGTCCG     CCCACGCGTCC  GGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAGCGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAA GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAGAGCGCGAGCGGGGCG                                                                   ]
[+] EMBL BM591250             [            CCGCCCACGCGTCCGCCCACGCGTCCGGA AAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGACAAGCGGTCCCAGACCGACCTGCGAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGGAACGTGCCGAA GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGACATAGAGC                                                                               ]
[+] EMBL BM607235             [            CCGCCCACGCGTCCGCCCACGCGTCCG     CCCACGCGT CCGGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAGCGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAAGGGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGC                                                                                               ]
[+] EMBL BM577092             [                        CCGCCCACGCGTCCG    AAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAAGG ACGTGCCGAA GGCGGTCGAGATCCTGTCCGACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATCGAGCGCGAGCGGGGCGTGATCCTGCGCGAGATGCAGGATGTCGAGAGCAACCTGCAAGAGGTGGTGTTTGACCATCTGCACGC]
[+] EMBL BM613410             [                        CCGCCCACGCGTCCGGA AAAACAAGGTTGCTAGGGGACGTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGCCGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAACCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTG GAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCGTGTTCTACGCTAAGTGCCTGTCGAA                                                                                                                                                           ]


>consensus_7767#0 CCGCGGACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAACAAGGTTGCTAGGGGAC GTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGC CGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCAATCAATGGCCTCGCTGC TGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCTGCTGTTCCGGCGCA CTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCGAGG TTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGGCAA CCGTCGGGCTGTGGATCGATGCCGGCTCGCGCTACGAGAACGACAGCAACAACGGGGTCG CCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGACCTGG AGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAGACCG TGTTCTACGCTAAGTGCCTGTCGAAGGACGTGCCGAAGGCGGTCGAGATCCTGTCCGACA TCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAGAGCGCGAGCGGGGCGTGATCCTGC GCGAGATGCAGGATGTCGAGAGCAACCTGCAAGAGGTGGTGTTTGACCATCTGCACGC



consensusID : consensus_7767#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 645
fasta sequence
                              [CCGCAGAACCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGGTGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTG-TGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAGCAGCACCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTA]

[+] EMBL BM584659             [CCGCAGAACCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGGTGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTG TGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCG                                                                                                                  ]
[+] EMBL BM593960             [             ccgGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGGTGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTGTTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAGCAGCACCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTA]


>consensus_7767#1 CCGCAGAACCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTC ATTACGCACTCCTCCAAACCTCCGCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCC GTTGTGTGGTTCGGGGATCAGAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTG GGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTG TTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGACCGAGCGCGTGAAGTTTGG TGGCGAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGG AAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCC TGCCTGGCCCAGTAATACGGGCGTGTGTGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGT GAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGA CAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAGC AGCACCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7767#0      CCGCGGACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAACAAGGTTGCTAGGGGAC 60
consensus_7767#1      ----------------------------CCGCAGAACCGCGACTGAATCGGTTACAGG-C 31
                                                  ** *    ***  *   *    * **  ** *

consensus_7767#0      GTGTTGCGCAAAACTCTGTCCGACCGTAAGCTCGGTATCCCTTCGATTCCCCAGATTTGC 120
consensus_7767#1      GTATCGT---AGCTGCTGGTCGAGCGCGT-TTCATTACGCACTC----CTCCAAACCTCC 83
                      ** * *    *    ***  *** **     **  **  *  **    * *** *  * *

consensus_7767#0      CGACGAATCCCGTACCCAATCAACTGTAACCCGTGCCGCTGCA--ATCAATGGCCTCGCT 178
consensus_7767#1      GCGGCCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAG 143
                             ****  **   *     ***   *   **** **     *    **    *  

consensus_7767#0      GCTGAAGTTTTCGGCTGGCCTGCGGGCGTACAGCCGCAGCCACCAGCT-GCTGTTCCGGC 237
consensus_7767#1      AGAGAGAGAGTGAGCGAGCGAGCGAGCGC-TGGTGCTGGGAACGAGTTTGCTGCTGTTTG 202
                         **     *  **  **  *** ***    *     *  ** ** * **** *     

consensus_7767#0      GCACTAAGGTTTCGAATGCGGCTGAATTCCGGGCCGCCCTGGTGAACGTCCCACCGACCG 297
consensus_7767#1      CGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAG-CGG 261
                        * *  *     *  ** *   *  ***  *  **   * *** *   ** *  * * *

consensus_7767#0      AGGTTACCACGCTGGACAGTGGGCTGCGTGTGGCGAGCGAAGATTCCGGCTCGCAGACGG 357
consensus_7767#1      AAGCGG--AAGCGAGAGAGCGACCGA------GCGCGTGAAGTTT---GGTGGCGAGCGA 310
                      * *     * **  ** ** *  *        *** * **** **   * * **   ** 

consensus_7767#0      CAACCGTCGGGCTGTGGATCGATGCCGGCTC-GCGCTACGAGAACGACAGCAACAACGGG 416
consensus_7767#1      GAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAG 370
                       *      * ** *** *****    *     **  **   * *     * ** ***  *

consensus_7767#0      GTCGCCCACTTCCTCGAGCACATGGCGTTCAAGGGTACGGCCAAACGGTCCCAGACCGAC 476
consensus_7767#1      TGC-------TCGTCGTGTACCTTGTGC-----GGTGC--TCGAAGGATCAAAGATCGAT 416
                        *       ** *** * ** * * *      *** *   * ** * **  *** *** 

consensus_7767#0      CTGGAGCTCGAGGTCGAAAACATGGGCGCCCACCTGAACGCGTACACGTCCCGGGAGCAG 536
consensus_7767#1      TGCCTGCCTG-GCCCAGTAATACGGGCG------TGTGTGTGTGGCCGTGT-GTGAG-AG 467
                           **  * *  *   ** * *****      **   * **   ***   * *** **

consensus_7767#0      ACCGTGTTCTACGCTAAGTGCCTGTCGAAGGACGTGCCGAAGGCGGTCGAGATCCTGTCC 596
consensus_7767#1      AGTGTGTG-TGTG-TGAGTGTTTGTGAAGAAAAGCTGCGAAC-CAGCACAGGTGCGATCG 524
                      *  ****  *  * * ****  ***  *   * *   ****  * *   ** * *  ** 

consensus_7767#0      GACATCATCCAGCACTCGAAGCTGGGCGAGGCGGAGATAG---AGCGCGAGCGGGGCGTG 653
consensus_7767#1      TCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATT 584
                           *   *      *    ***  **   *   *  *    ** *  ***   ** * 

consensus_7767#0      ATCCTGCGCGAGATGCAGGATGTCGAGAGCAACC-TGCAAGAGGTGGTGTTTGACCATCT 712
consensus_7767#1      AGACAGAGTCAGCAGCAGCA--CCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACA 642
                      *  * * *  **  **** *   *   **** ** **   **      * * *   * * 

consensus_7767#0      GCACGC 718
consensus_7767#1      GTA--- 645
                      * *   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)