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Anopheles gambiae
cluster # 7799 cluster # 7799       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7799#0 length = 1099 sequences # 1  
consensus_7799#1 length = 829 sequences # 3  
consensus_7799#2 length = 760 sequences # 2  
consensus_7799#3 length = 666 sequences # 1  
consensus_7799#4 length = 565 sequences # 1  

consensusID : consensus_7799#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1099
fasta sequence
                              [GGCAAGAATTCCCCGAGGTTATCGTGACTGGCAAGGGGTGGAANCGTTGGGCCGGGAGTGGCAACCATGACGTGATCATACCTGGACATAAACTGTTTCCAAAAATGCATCTACACGTATACATGTACAACTGACCTGGAAGGCCACTGTACCAGTATATGTTGGATACTATGGTATACTGCTGTAACTGTGGACCCTGTACAACTGTGTGTGCTGGGTAAATGCTGGGACTGAGCAGCATGTGCTGCAGAGCTGAACCACAAAACCTCTCGCACTGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACTGAAGTGCAACTCGACTGTGCGAGCAATGTGCGAGCCTGGGCACTGCATGGTAATGCTGTGTGATGCCTGGTCTGTTGTGCCTGGACAACTGGTATTCCGANTGATCACCCAAACCTGTCTCTGCACACAGGCAAGGCTTAANAGNCTGACTACANGACAGCCNGTTNTCTGGGGCTGGANGNAATGAGAAAAGTAACNNTTCTGGTCTCCCTGTNGTTGAAACCCCCGTGGTTGTGACACATNACGNTGTCCGATATAACAAANTGGAACCAGGGGGCCTGGCCCGTCCTGGGCTGCNAAAGGTTGNAACGAGGAACAGCCTCGACAACCTGAAGCACCGANACACAAAACGGCAGTGTACCGCCTNCGCTNCGGAATCANATACNCGAAATACCNAGCCAANCANNGCCCAAACCCCAAAGGGGNCTNTCCCCAAGATTGGCTTAGTTCCCAACAGCCTAACCGNNCCTTGGGGCCANATAGCAAGCNCGNACCNCACACAAACCCGGCCTCAAACGGGCCCAGCAAGGCAACNACGCGCATCAACCCCCGGGTGTACATACGCAACACCCGAAACAACACACGGAACACCCGCGCACCTAGGCCNCCCCAACAGAANCGGTCANCGAGCCCCANAGGATAACCCGCGCCACCTNGCGAGCCAAAGCCCCCACACGCCAGCCAGCACCCGCGGCCNCANCCCCGANNGGACATTGGCTACCCCGACCAACAAACCACGCGCANACCCGACACTGNAACACCCNNANAGCGACG]

[+] EMBL AL930691             [GGCAAGAATTCCCCGAGGTTATCGTGACTGGCAAGGGGTGGAANCGTTGGGCCGGGAGTGGCAACCATGACGTGATCATACCTGGACATAAACTGTTTCCAAAAATGCATCTACACGTATACATGTACAACTGACCTGGAAGGCCACTGTACCAGTATATGTTGGATACTATGGTATACTGCTGTAACTGTGGACCCTGTACAACTGTGTGTGCTGGGTAAATGCTGGGACTGAGCAGCATGTGCTGCAGAGCTGAACCACAAAACCTCTCGCACTGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACTGAAGTGCAACTCGACTGTGCGAGCAATGTGCGAGCCTGGGCACTGCATGGTAATGCTGTGTGATGCCTGGTCTGTTGTGCCTGGACAACTGGTATTCCGANTGATCACCCAAACCTGTCTCTGCACACAGGCAAGGCTTAANAGNCTGACTACANGACAGCCNGTTNTCTGGGGCTGGANGNAATGAGAAAAGTAACNNTTCTGGTCTCCCTGTNGTTGAAACCCCCGTGGTTGTGACACATNACGNTGTCCGATATAACAAANTGGAACCAGGGGGCCTGGCCCGTCCTGGGCTGCNAAAGGTTGNAACGAGGAACAGCCTCGACAACCTGAAGCACCGANACACAAAACGGCAGTGTACCGCCTNCGCTNCGGAATCANATACNCGAAATACCNAGCCAANCANNGCCCAAACCCCAAAGGGGNCTNTCCCCAAGATTGGCTTAGTTCCCAACAGCCTAACCGNNCCTTGGGGCCANATAGCAAGCNCGNACCNCACACAAACCCGGCCTCAAACGGGCCCAGCAAGGCAACNACGCGCATCAACCCCCGGGTGTACATACGCAACACCCGAAACAACACACGGAACACCCGCGCACCTAGGCCNCCCCAACAGAANCGGTCANCGAGCCCCANAGGATAACCCGCGCCACCTNGCGAGCCAAAGCCCCCACACGCCAGCCAGCACCCGCGGCCNCANCCCCGANNGGACATTGGCTACCCCGACCAACAAACCACGCGCANACCCGACACTGNAACACCCNNANAGCGACG]


>consensus_7799#0 GGCAAGAATTCCCCGAGGTTATCGTGACTGGCAAGGGGTGGAANCGTTGGGCCGGGAGTG GCAACCATGACGTGATCATACCTGGACATAAACTGTTTCCAAAAATGCATCTACACGTAT ACATGTACAACTGACCTGGAAGGCCACTGTACCAGTATATGTTGGATACTATGGTATACT GCTGTAACTGTGGACCCTGTACAACTGTGTGTGCTGGGTAAATGCTGGGACTGAGCAGCA TGTGCTGCAGAGCTGAACCACAAAACCTCTCGCACTGGTAGCATTCTGCAGCTCAATCAA ACAAAGCTGCTCTGTCACGTGCACTGAAGTGCAACTCGACTGTGCGAGCAATGTGCGAGC CTGGGCACTGCATGGTAATGCTGTGTGATGCCTGGTCTGTTGTGCCTGGACAACTGGTAT TCCGANTGATCACCCAAACCTGTCTCTGCACACAGGCAAGGCTTAANAGNCTGACTACAN GACAGCCNGTTNTCTGGGGCTGGANGNAATGAGAAAAGTAACNNTTCTGGTCTCCCTGTN GTTGAAACCCCCGTGGTTGTGACACATNACGNTGTCCGATATAACAAANTGGAACCAGGG GGCCTGGCCCGTCCTGGGCTGCNAAAGGTTGNAACGAGGAACAGCCTCGACAACCTGAAG CACCGANACACAAAACGGCAGTGTACCGCCTNCGCTNCGGAATCANATACNCGAAATACC NAGCCAANCANNGCCCAAACCCCAAAGGGGNCTNTCCCCAAGATTGGCTTAGTTCCCAAC AGCCTAACCGNNCCTTGGGGCCANATAGCAAGCNCGNACCNCACACAAACCCGGCCTCAA ACGGGCCCAGCAAGGCAACNACGCGCATCAACCCCCGGGTGTACATACGCAACACCCGAA ACAACACACGGAACACCCGCGCACCTAGGCCNCCCCAACAGAANCGGTCANCGAGCCCCA NAGGATAACCCGCGCCACCTNGCGAGCCAAAGCCCCCACACGCCAGCCAGCACCCGCGGC CNCANCCCCGANNGGACATTGGCTACCCCGACCAACAAACCACGCGCANACCCGACACTG NAACACCCNNANAGCGACG



consensusID : consensus_7799#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 829
fasta sequence
                              [AATCCCCGAGGTTAATCATACCGGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGTACAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAACTCGACGTGCGGCAAGTGCGAGCCGGGACTGCTGGTAAGCGTGGAGCCGGTCGTTGTGCCGGAAACGGTTTCGAAGATCACCAAACCCGTCTCGCACAAGGAAGGCTTAAAGCTGATACAGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAAAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAAGCTCGGCTGGAATGAGGGCAAACCGCTAGGCAAGAACGATACCGGTCTGACCGAACCGATCGCA-CTGACCACGAACGTGGGCACGTCCGGGCTGGGCAGCCACGGTCAGATGGCGATCGGTGGTGGTCCGCACAACGCGAAACCGATCGATCCCCGGCGGCACAGCATTTGGCGCAAAACTCAGGAACGCTTCGAACGGTCCACCGTGTTCGAGGCGGCAAGCAGCGAAGATACCGAGTGAGCACGGTTGATGTGAGAATAAATCGGTGTTAATGG]

[+] EMBL AL694705             [AATCCCCGAGGTTAATCATACCGGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGTACAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAACTCGACGTGCGGCAAGTGCGAGCCGGGACTGCTGGTAAGCGTGGAGCCGGTCGTTGTGCCGGAAACGGTTTCGAAGATCACCAAACCCGTCTCGCACAAGGAAGGCTTAAAGCTGATACAGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAAAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAAGCTCGGCTGGAATGAGGGCAAACCGCTAGGCAAGAACGATACCGGTCTGACCGAACCGATCGCACCTGACCACGAACGTGGGCACGTNCGGGCTGGG                                                                                                                                                                                    ]
[+] EMBL BX629254             [                                                                                                                                                                                                                                                                                                                                                                nCTGATACAGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAAAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAAGCTCGGCTGGAATGAGGGCAAACCGCTAGGCAAGAACGATACCGGTCTGACCGAACCGATCGCA CTGACCACGAACGTGGGCACGTCCGGGCTGGGCAGCCACGGTCAGATGGCGATCGGTGGTGGTCCGCACAACGCGAAACCGATCGATCCCCGGCGGCACAGCATTTGGCGCAAAACTCAGGAACGCTTCGAACGGTCCACCGTGTTCGAGGCGGCAAGCAGCGAAGATACCGAGTGAGCACGGTTGATGTGAGAATAAATCGGTGTTAATGG]
[+] EMBL BX629145             [                                                                                                                                                                                                                                                                                                                                                                    ATACAGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAAAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAAGCTCGGCTGGAATGAGGGCAAACCGCTAGGCAAGAACGATACCGGTCTGACCGAACCGATCGCA CTGACCACGAACGTGGGCACGTCCGGGCTGGGCAGCCACGGTCAGATGGCGATCGGTGGTGGTCCGCACAACGCGAAACCGATCGATCCCCGGCGGCACAGCATTTGGCGCAAAACTCAGGAACGCTTCGAACGGTCCACCGTGTTCGAGGCGGCAAGCAGCGAAGATACCGAGTGAGCACGGTTGATGTGAGAATAAATCGGTGTTAAT  ]


>consensus_7799#1 AATCCCCGAGGTTAATCATACCGGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGT ACAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGT ACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCT CGCACGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCA ACTCGACGTGCGGCAAGTGCGAGCCGGGACTGCTGGTAAGCGTGGAGCCGGTCGTTGTGC CGGAAACGGTTTCGAAGATCACCAAACCCGTCTCGCACAAGGAAGGCTTAAAGCTGATAC AGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATA GTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGC ACGAAAAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCC AGATGCTGTCCAAGCTCGGCTGGAATGAGGGCAAACCGCTAGGCAAGAACGATACCGGTC TGACCGAACCGATCGCACTGACCACGAACGTGGGCACGTCCGGGCTGGGCAGCCACGGTC AGATGGCGATCGGTGGTGGTCCGCACAACGCGAAACCGATCGATCCCCGGCGGCACAGCA TTTGGCGCAAAACTCAGGAACGCTTCGAACGGTCCACCGTGTTCGAGGCGGCAAGCAGCG AAGATACCGAGTGAGCACGGTTGATGTGAGAATAAATCGGTGTTAATGG



consensusID : consensus_7799#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 760
fasta sequence
                              [ACGCTCCGATGCGGCGCGTGAAAAGAAAGCTCGACCGGGCGATAGCGATGACAGCGAGCGTAGTAGTAGTAGGCGACGGAGCCGAAAGCGTAATCGAAAGCAGAAAAAATCACGGTCCCATCGGAAGCACCGTCGCCGTCGGTCGCACTCCACCTCGGAGTCGGACTCGAGCGACAGTAGCGAGGCGGTGCGCTCGAAGCGTTCGAAAAAGAAACGGAAATCGAAACGGCGCCATCGCTCGTCGTCCTCGGATGGGAAGACGGTGGTCAAGGAGGAGGGCGAGCTGGAGAGTAGCGAAAGCGGCGATTCCAAGTCGGTCGGTTCGGTGATAGAGGTGAAATCGAGCGCGGAGGATAGTGCCGACTCGCAGACCGAACAGTTTCAAACGGGCTACAAAGATGTAGCTAAACGGTACCCGCCGTCCCTGCGCATGATAGTGCAGGAGACGAACGTAAAAGAGCTTAAAATCGGTTCGCTCTTCATCGTGACCTGCAAGGGTGGAACGTTGGGCCGGGAGGGCAACCATGACGTGATCATACCGGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGTACAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCATTCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAAC]

[+] EMBL BX620638             [ACGCTCCGATGCGGCGCGTGAAAAGAAAGCTCGACCGGGCGATAGCGATGACAGCGAGCGTAGTAGTAGTAGGCGACGGAGCCGAAAGCGTAATCGAAAGCAGAAAAAATCACGGTCCCATCGGAAGCACCGTCGCCGTCGGTCGCACTCCACCTCGGAGTCGGACTCGAGCGACAGTAGCGAGGCGGTGCGCTCGAAGCGTTCGAAAAAGAAACGGAAATCGAAACGGCGCCATCGCTCGTCGTCCTCGGATGGGAAGACGGTGGTCAAGGAGGAGGGCGAGCTGGAGAGTAGCGAAAGCGGCGATTCCAAGTCGGTCGGTTCGGTGATAGAGGTGAAATCGAGCGCGGAGGATAGTGCCGACTCGCAGACCGAACAGTTTCAAACGGGCTACAAAGATGTAGCTAAACGGTACCCGCCGTCCCTGCGCATGATAGTGCAGGAGACGAACGTAAAAGAGCTTAAAATCGGTTCGCTCTTCATCGTGACCTGCAAGGGTGGAACGTTGGGCCGGGAGGGCAACCATGACGTGATCATACCGGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGTACAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCATTCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAAC]
[+] EMBL BX604898             [                                                                                                                                                                                                                  GAAACGGAAATCGAAACGGCGCCATCGCTCGTCGTCCTCGGATGGGAAGACGGTGGTCAAGGAGGAGGGCGAGCTGGAGAGTAGCGAAAGCGGCGATTCCAAGTCGGTCGGTTCGGTGATAGAGGTGAAATCGAGCACGGAGGATAGTGCCGACTCGCAGACCGAACAGTTTCAAACGGGCTACAAAGATGTAGCGAAACGGTACCCACCGTCCCTGCGCATGATAGTGCAGGAGACGAACGTGAAAGAGCTTAAAATCGGTTCGCTCTTCATCGTGACCTGCAAGGGTGGAACGTTGGGCCGGGAGGGCAACCATGACGTGATCATACCGGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGTACAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGCAACGGCACCCTGTACAACGGGGTGCGGGTAAAGCGGAACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCTC                                                             ]


>consensus_7799#2 ACGCTCCGATGCGGCGCGTGAAAAGAAAGCTCGACCGGGCGATAGCGATGACAGCGAGCG TAGTAGTAGTAGGCGACGGAGCCGAAAGCGTAATCGAAAGCAGAAAAAATCACGGTCCCA TCGGAAGCACCGTCGCCGTCGGTCGCACTCCACCTCGGAGTCGGACTCGAGCGACAGTAG CGAGGCGGTGCGCTCGAAGCGTTCGAAAAAGAAACGGAAATCGAAACGGCGCCATCGCTC GTCGTCCTCGGATGGGAAGACGGTGGTCAAGGAGGAGGGCGAGCTGGAGAGTAGCGAAAG CGGCGATTCCAAGTCGGTCGGTTCGGTGATAGAGGTGAAATCGAGCGCGGAGGATAGTGC CGACTCGCAGACCGAACAGTTTCAAACGGGCTACAAAGATGTAGCTAAACGGTACCCGCC GTCCCTGCGCATGATAGTGCAGGAGACGAACGTAAAAGAGCTTAAAATCGGTTCGCTCTT CATCGTGACCTGCAAGGGTGGAACGTTGGGCCGGGAGGGCAACCATGACGTGATCATACC GGACATAAACGTTTCCAAAAAGCATCTACAGTTCATGTACAACGACCGCAAGGCCACGTA CCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCG GGACGAGCAGCAGGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCT CATTCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAAC



consensusID : consensus_7799#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [GATCGCCCGAGGNAGGAAGGCGAATGTCCTGGCCCAGGAAGAGGATGTTCCCGAGGAACCGCTCGATATAAAAGCATTTGTGGACGACATCAAGAAGACGGCTCAGGATGTGGACATTCAGAATAGATACATCTACGAGCCCACGTCCGGCATGTATTACGATCCGGCGACGGGTTATTACTACAATTCGATTTACGGCTTACATTACGATGGCCACCGCGGTTGCTACCTGAAGTATAACGAAGAAACAAAGGAGTACGATTTCTACTCACAAGTCATTCCCGAAACAATGGTAGAGGCCGAACCGAATGCCAAACAAAAGGTTCCTACCACTACTACTTCACCTTCTCTCTCATTAGACGACAGTTTTGTAGCCCGATTTTCCTCGCTGGAGATCGACCACATGCGTCAAAACGCGCTAGGTAGGTGATCGAGTGCGGCGTTTGTTAACAGCGGCCCCCGTTTTCTTTCTCTCTCTCTCTCTTTNCTATATTCCATTCCACAACACTGAACCGCACAGAAATCGAAACGCTCCGATGCGGCGCGTGAACAAGAAAGCTCGACCGGGCGATAGCGATGACACGCGAGCGTAGTCAGTACTAGGCCGACGGAGCCCGAACAGCGTAATCGAACAGCACGCAAACACAATCACGGTCCCATCGGAAG]

[+] EMBL AL931760             [GATCGCCCGAGGNAGGAAGGCGAATGTCCTGGCCCAGGAAGAGGATGTTCCCGAGGAACCGCTCGATATAAAAGCATTTGTGGACGACATCAAGAAGACGGCTCAGGATGTGGACATTCAGAATAGATACATCTACGAGCCCACGTCCGGCATGTATTACGATCCGGCGACGGGTTATTACTACAATTCGATTTACGGCTTACATTACGATGGCCACCGCGGTTGCTACCTGAAGTATAACGAAGAAACAAAGGAGTACGATTTCTACTCACAAGTCATTCCCGAAACAATGGTAGAGGCCGAACCGAATGCCAAACAAAAGGTTCCTACCACTACTACTTCACCTTCTCTCTCATTAGACGACAGTTTTGTAGCCCGATTTTCCTCGCTGGAGATCGACCACATGCGTCAAAACGCGCTAGGTAGGTGATCGAGTGCGGCGTTTGTTAACAGCGGCCCCCGTTTTCTTTCTCTCTCTCTCTCTTTNCTATATTCCATTCCACAACACTGAACCGCACAGAAATCGAAACGCTCCGATGCGGCGCGTGAACAAGAAAGCTCGACCGGGCGATAGCGATGACACGCGAGCGTAGTCAGTACTAGGCCGACGGAGCCCGAACAGCGTAATCGAACAGCACGCAAACACAATCACGGTCCCATCGGAAG]


>consensus_7799#3 GATCGCCCGAGGNAGGAAGGCGAATGTCCTGGCCCAGGAAGAGGATGTTCCCGAGGAACC GCTCGATATAAAAGCATTTGTGGACGACATCAAGAAGACGGCTCAGGATGTGGACATTCA GAATAGATACATCTACGAGCCCACGTCCGGCATGTATTACGATCCGGCGACGGGTTATTA CTACAATTCGATTTACGGCTTACATTACGATGGCCACCGCGGTTGCTACCTGAAGTATAA CGAAGAAACAAAGGAGTACGATTTCTACTCACAAGTCATTCCCGAAACAATGGTAGAGGC CGAACCGAATGCCAAACAAAAGGTTCCTACCACTACTACTTCACCTTCTCTCTCATTAGA CGACAGTTTTGTAGCCCGATTTTCCTCGCTGGAGATCGACCACATGCGTCAAAACGCGCT AGGTAGGTGATCGAGTGCGGCGTTTGTTAACAGCGGCCCCCGTTTTCTTTCTCTCTCTCT CTCTTTNCTATATTCCATTCCACAACACTGAACCGCACAGAAATCGAAACGCTCCGATGC GGCGCGTGAACAAGAAAGCTCGACCGGGCGATAGCGATGACACGCGAGCGTAGTCAGTAC TAGGCCGACGGAGCCCGAACAGCGTAATCGAACAGCACGCAAACACAATCACGGTCCCAT CGGAAG



consensusID : consensus_7799#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence
                              [CCCGAGGTTAACGAGGCGTTTCCAAAAAGCATTACAGTTCATGTNNCAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGNGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAACTCGACGTGCGGCAAGTGCGAGCCGGGACTGCTGGTAAGCGTGGAGCCGGTCGTTGTGCCGGAAACGGTTTCGAAGATCACCAAACCCGTCTCGCACAAGGAAGGCTTAAAGCTGATACAGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAACAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAAGCTCGGCCTGGAACTGAGGGCAAAC]

[+] EMBL AL931004             [CCCGAGGTTAACGAGGCGTTTCCAAAAAGCATTACAGTTCATGTNNCAACGACCGCAAGGCCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAGCAGNGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAACTCGACGTGCGGCAAGTGCGAGCCGGGACTGCTGGTAAGCGTGGAGCCGGTCGTTGTGCCGGAAACGGTTTCGAAGATCACCAAACCCGTCTCGCACAAGGAAGGCTTAAAGCTGATACAGAAGCGTTTTGGGCTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAACAAACGCAGGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAAGCTCGGCCTGGAACTGAGGGCAAAC]


>consensus_7799#4 CCCGAGGTTAACGAGGCGTTTCCAAAAAGCATTACAGTTCATGTNNCAACGACCGCAAGG CCACGTACCAGTTTGTGGATCTTGGTTCGCGTAACGGCACCCTGTACAACGGTGTGCGGG TAAAGCGGGACGAGCAGCAGNGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATT CTGCAGCTCAATCAAACAAAGCTGCTCTGTCACGTGCACGAAGGCAACTCGACGTGCGGC AAGTGCGAGCCGGGACTGCTGGTAAGCGTGGAGCCGGTCGTTGTGCCGGAAACGGTTTCG AAGATCACCAAACCCGTCTCGCACAAGGAAGGCTTAAAGCTGATACAGAAGCGTTTTGGG CTGGAGAATGAGAAGTACGTCGGTTCCGGTGAACCCGGTGGAAATAGTGTCGATTACAAG GACCGGGCCGCCGTCCGGCGCAAGGTGAAGGGAAGCTCGAACGAGCACGAAACAAACGCA GGTCGCCTCGCTCGATCAATCGATCAGCAGCAGCAACAAGGGCTTCCAGATGCTGTCCAA GCTCGGCCTGGAACTGAGGGCAAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7799#1      ------------------------------------------------------------
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      GGCAAGAATTCCCCGAGGTTATCGTGACTGGCAAGGGGTGGAANCGTTGGGCCGGGAGTG 60
consensus_7799#2      ------------------------------------------------------------
consensus_7799#3      ------------------------------------------------------------
                                                                                  

consensus_7799#1      -AATCCCCGAGGTTAATCATACCGGACATAAAC-GTTTCCAAAAA-GCATCTACA---GT 54
consensus_7799#4      -----CCCGAGGTTAACGA-----------GGC-GTTTCCAAAAA-GCAT-TACA---GT 38
consensus_7799#0      GCAACCATGACGTGATCATACCTGGACATAAACTGTTTCCAAAAATGCATCTACACGTAT 120
consensus_7799#2      -ACGCTCCGATGCGG-CGCGTGAAAAGAAAGCTCGACCGGGCGATAGCGATGACAGCGAG 58
consensus_7799#3      ------------------------------------------------------------
                                                                                  

consensus_7799#1      TCATGTAC-AACGACC-GCAAGGCC---AC-GTACCAGTTTGTGG-----ATCTTGGTTC 103
consensus_7799#4      TCATGTNNCAACGACC-GCAAGGCC---AC-GTACCAGTTTGTGG-----ATCTTGGTTC 88
consensus_7799#0      ACATGTACAACTGACCTGGAAGGCC---ACTGTACCAGTATATGTTGGATACTATGGTAT 177
consensus_7799#2      CGTAGTAGTAGTAGGCGACGGAGCCGAAAGCGTAATCGAAAGCAGAAAAAATCACGGTCC 118
consensus_7799#3      ---GATCGCCCGAGGNAGGAAGGCG---AATGTCCTGGCCCAGGAAG---AGGATGTTCC 51
                           *                **    *  **    *            *    * *  

consensus_7799#1      GC----GTAACGGC--ACCCTGTACAACGGTGTGCG---GGTAAAG--CGGGAC-GAGCA 151
consensus_7799#4      GC----GTAACGGC--ACCCTGTACAACGGTGTGCG---GGTAAAG--CGGGAC-GAGCA 136
consensus_7799#0      ACTGCTGTAACTGTGGACCCTGTACAACTGTGTGTGCTGGGTAAATGCTGGGACTGAGCA 237
consensus_7799#2      CAT--CGGAAGCACCGTCGCCGTCGGTCGCACTCCA---CCTCGGAGTCGGACTCGAGCG 173
consensus_7799#3      CGA---GGAACCGCTCGATATAAAAGCATTTGTGGACGACATCAAGAAGACGGCTCAGGA 108
                            * **                      *        *              **  

consensus_7799#1      GCAGG---CGCAGAGC-GAACCACAAAACCTCTCGCAC-GGTAGCATTCTGCAGCTCAAT 206
consensus_7799#4      GCAGNG--CGCAGAGC-GAACCACAAAACCTCTCGCAC-GGTAGCATTCTGCAGCTCAAT 192
consensus_7799#0      GCATGTGCTGCAGAGCTGAACCACAAAACCTCTCGCACTGGTAGCATTCTGCAGCTCAAT 297
consensus_7799#2      ACAGTA---GCGAGGCGGTGCGCTCGAAGCGTTCGAAAAAGAAAC-----GGAAATCGA- 224
consensus_7799#3      TGTGGACATTCAGAATAGATACATCTACGAGCCCACGTCCGGCATGTATTACGATCCGGC 168
                                *      *        *      *      *               *   

consensus_7799#1      CAAACAAAGCTGCTCTGTCACGTGCAC-GAAG-GCAACTCGAC-GTGCG-GCAA-GTGCG 261
consensus_7799#4      CAAACAAAGCTGCTCTGTCACGTGCAC-GAAG-GCAACTCGAC-GTGCG-GCAA-GTGCG 247
consensus_7799#0      CAAACAAAGCTGCTCTGTCACGTGCACTGAAGTGCAACTCGACTGTGCGAGCAATGTGCG 357
consensus_7799#2      --AACGGCGCCATCGCTCGTCGTCCTCGGATG-GGAAGACGGTGGTCAAGGAGGAGGGCG 281
consensus_7799#3      GACGGGTTATTACTACAATTCGATTTACGGCTTACATTACGATGGCCACCGCGG-TTGCT 227
                                          **      *      *   **   *     *      ** 

consensus_7799#1      AGCCGGG--ACTGC-TGGTAA----GCGTGGAGCC-GGTC-GTTGTGCCGG---AAACGG 309
consensus_7799#4      AGCCGGG--ACTGC-TGGTAA----GCGTGGAGCC-GGTC-GTTGTGCCGG---AAACGG 295
consensus_7799#0      AGCCTGGGCACTGCATGGTAATGCTGTGTGATGCCTGGTCTGTTGTGCCTGGACAACTGG 417
consensus_7799#2      AGCTGGAGAGTAGC--GAAAG----CGGCGATTCCAAGTCGGTCGGTTCGG---TGATAG 332
consensus_7799#3      ACCTGAAGTATAACGAAGAAA----CAAAGGAGTACGATT--TCTACTCAC---AAGTCA 278
                      * *          *     *         *        *   *     *           

consensus_7799#1      T--TTCGAA-GATCACC-AAACCCGTCTC---GCACAA---GGAAGGCTTAAA--GCTGA 357
consensus_7799#4      T--TTCGAA-GATCACC-AAACCCGTCTC---GCACAA---GGAAGGCTTAAA--GCTGA 343
consensus_7799#0      TATTCCGANTGATCACCCAAACCTGTCTCTGCACACAG---GCAAGGCTTAANAGNCTGA 474
consensus_7799#2      AGGTGAAATCGAGCGCGGAGGATAGTGCCGACTCGCAGACCGAACAGTTTCAA--ACGGG 390
consensus_7799#3      TTCCCGAAACAATGGTAGAGGCCGAACCGAATGCCAAA--CAAAAGGTTCCTACCACT-A 335
                             *   *      *              *  *      *  * *       *   

consensus_7799#1      -TACAGAAG----CGTTTT---GGGCTGGAG--AATGAGAAGTACGTCGGTTCCGGTGAA 407
consensus_7799#4      -TACAGAAG----CGTTTT---GGGCTGGAG--AATGAGAAGTACGTCGGTTCCGGTGAA 393
consensus_7799#0      CTACANGACAGCCNGTTNTCTGGGGCTGGANGNAATGAGAAAAGTAACNNTTCTGGTCTC 534
consensus_7799#2      CTACAAAGA-------TGT----AGCTAAACGGTACCCGCCGTCC-CTGCGCATGATAGT 438
consensus_7799#3      CTACTTCACC-----TTCTCTCTCATTAGAC---GACAGTTTTGTAGCCCGATTTTCCTC 387
                       ***            * *       *  *        *                     

consensus_7799#1      CCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCG---CAAGGTGAAG 464
consensus_7799#4      CCCGGTGGAAATAGTGTCGATTACAAGGACCGGGCCGCCGTCCGGCG---CAAGGTGAAG 450
consensus_7799#0      CCTGTNGTTGAAACCCCCGTGGTTGTGACACATNACGNTGTCCGATATAACAAANTGGAA 594
consensus_7799#2      GCAGGAGACGAACGTAAAAGAGCTTAAAATCGGTTCGCTCTTCATCGTGACCTGCAAGGG 498
consensus_7799#3      GCTGGAGATCGAC-CACATGCGTCAAAACGCGCTAGGTAGGTGATCG---------AGTG 437
                       * *  *                       *     *                       

consensus_7799#1      --GGAAGCTCGAACGAGCACGAAA-AAACGCAGGTCGCCTCGCTCGATCAA-TCGATCAG 520
consensus_7799#4      --GGAAGCTCGAACGAGCACGAAACAAACGCAGGTCGCCTCGCTCGATCAA-TCGATCAG 507
consensus_7799#0      CCAGGGGGCCTGGCCCGTCCTGGGCTGCNAAAGGTTGNAACGAGGAACAGCCTCGACAAC 654
consensus_7799#2      T-GGAACGTTGGGCCGGGAGGGCAACCATG-ACGTGATCATACCGGACATAAACGTTTCC 556
consensus_7799#3      C---GGCGTTTGTTAACAGCGGCCCCCGTTTTCTTTCTCTCTCTCTCTCTTTNCTATATT 494
                                                        *                  *      

consensus_7799#1      CAGCAGCAACAAGGGCTTCCA-GATGCTGTCCAAGCTCGGC-TGGAA-TGA-GGGCAAAC 576
consensus_7799#4      CAGCAGCAACAAGGGCTTCCA-GATGCTGTCCAAGCTCGGCCTGGAACTGA-GGGCAAAC 565
consensus_7799#0      CTGAAGCACCGANACACAAAACGGCAGTGTACCGCCTNCGCTNCGGAATCA-NA-TACNC 712
consensus_7799#2      AAAAAGCATCTACAGTTCATG-TACAACGACC--GCAAGGCCACGTA-CCA-GTTTGTGG 611
consensus_7799#3      CCATTCCA-CAACACTGAACCGCACAGAAATC--GAAACGCTCCGATGCGGCGCGTGAAC 551
                            ** * *                   *       **   *               

consensus_7799#1      CGCTAGGCAAG-AACGATACCGGTCTG-ACCGAACCGATCGCACTGACCACGAACGTGGG 634
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      GAAATACCNAG-CCAANCANNGCCCAA-ACCCCAAAGGGGNCTNTCCCCAAGATTG-GCT 769
consensus_7799#2      ATCTTGGTTCG-CGTAACGGCACCCTGTACAACGGTGTGCGGGTAAAGCGGGACGAGCAG 670
consensus_7799#3      AAGAAAGCTCGACCGGGCGATAGCGATGACACGCGAGCGTAGTCAGTACTAGGCCGACGG 611
                                                                                  

consensus_7799#1      CACGTCCGGGCTGGGCAGCCACGGTCAGATGGCG--ATCGGTGGTGGTCCGCACAACGCG 692
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      TAGTTCCCAACAGCCTAACCGNNCCTTGGGGCCA--NATAGCAAGCNCGNACCNCACACA 827
consensus_7799#2      CAGGCGCAGAGCGAACCACAAAACCTCTCGCACGGTAGCATTCTGCAGCTCATTCAAACA 730
consensus_7799#3      --AGCCCGAACAGCGTAATCGAACAGCACGCAAA--CACAATCACGGTCCCATCGGAAG- 666
                                                                                  

consensus_7799#1      AAACCGATCGATCCCCGGC--GGCACAGCATTTG-GCGCAAAACTCAGGAACGCTTCGAA 749
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      AACCCGGCCTCAAACGGGCCCAGCAAGGCAACNACGCGCATCAACCCCCGGGTGTACATA 887
consensus_7799#2      AAGCTGCTCTGTCACGTGC--ACGAAGGCAAC---------------------------- 760
consensus_7799#3      ------------------------------------------------------------
                                                                                  

consensus_7799#1      CGGTCCACCGTGTTCGAGGCGGCAAGCAGCGAAGATACCGAGTGAGCACGGTTGATGTGA 809
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      CGCAACACCCGAAACAACACACGGAACACCCGCGCACCTAGGCCNCCCCAACAGAANCGG 947
consensus_7799#2      ------------------------------------------------------------
consensus_7799#3      ------------------------------------------------------------
                                                                                  

consensus_7799#1      GAATAAATCGGTGTTAATGG---------------------------------------- 829
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      TCANCGAGCCCCANAGGATAACCCGCGCCACCTNGCGAGCCAAAGCCCCCACACGCCAGC 1007
consensus_7799#2      ------------------------------------------------------------
consensus_7799#3      ------------------------------------------------------------
                                                                                  

consensus_7799#1      ------------------------------------------------------------
consensus_7799#4      ------------------------------------------------------------
consensus_7799#0      CAGCACCCGCGGCCNCANCCCCGANNGGACATTGGCTACCCCGACCAACAAACCACGCGC 1067
consensus_7799#2      ------------------------------------------------------------
consensus_7799#3      ------------------------------------------------------------
                                                                                  

consensus_7799#1      --------------------------------
consensus_7799#4      --------------------------------
consensus_7799#0      ANACCCGACACTGNAACACCCNNANAGCGACG 1099
consensus_7799#2      --------------------------------
consensus_7799#3      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)