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Anopheles gambiae
cluster # 7807 cluster # 7807       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7807#0 length = 1625 sequences # 4  
consensus_7807#1 length = 857 sequences # 1  
consensus_7807#2 length = 697 sequences # 1  
consensus_7807#3 length = 634 sequences # 1  
consensus_7807#4 length = 473 sequences # 1  

consensusID : consensus_7807#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1625
fasta sequence
                              [TATCTGGAGCAGAATATGATAAAGGAGCTATCCAACGTGGGTGAAGGGTGGAATACCATTCGCCGACTTAACATAGCAAACAACAGCTTCACCACTCTGCCTGGAGATAGTTTGCCCGAACAGCTCGAGCTTCTCGATGTCTCTGGCAATCAATTGACCGAGGTCGACGCAGCCTTCATAATCAAGCTGAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGCCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTACTCTACCCTCCAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTCAAGCATAACTTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTATGCCGGGCGAGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGATTCACGACGCACCATTATCATCCTCTCGCTCAACTACCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTGCGTACTTACAGTCGTTGGAGGACAAGCGCAACCGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAGCTCGATCCGGAGCTCCGGGCATACCTCAAAACCAACACGTACGTCCGCTGGGACGATCCGTGGTTCTGGGACAAGCTGCACTACGCCATGCCCCACAAGCGCCGGCCGAAGGGTGTGCAGGCAACCGACAACATGCGCATGGCGTCCGTGGACAAACTAAATCTACTGAAAGCACCGGCCATCATGACACCGGCGTCATCCGAAACCACACCGCCTGTCGAACATGCCGAAAAGGGCATTGGCGCACGACGGTCCACTAGGTTGCTATGGTGACCCTTCTAAAACTTCTACGATGCCGCCATTCATCATCAGCAATGGCATGTCCAACTAGTGCTTACTTTACCCTATTTTTCAAGAGTGTTGCGTCCAATCAACAAAAGAACATTACTTTTGTGCAGCTAATTTACGGCATCTTATTCTTACAACTTGACTAGCATACTGCAAAATGATATTGGACGGAGACAAAATCTCATTATGAAATATGGAGGACTAATGAAATATATATATATTTTTTTTTGTAAATAGGTGCTATAACTCACAACCCTGCTGGCATCTAATAAATAGTGATAACTTTTTTTTTACTTAATCTTTATACTTTTTTTAGTAATAAAAGAAATCCCAAGAAACTGAATTGTCTCGATAAGTAAGGAAACCGGAAAAATGTATATCCTAAAAGATGAGATTTGTTGTAAAGTTGAAGAATTTGTTTTCCAGTGAAACATTGGCAATATCGGTTAGTTTCGAGTATGGAAAACGTTGTTTTGTAATAATAA]

[+] EMBL BX622193             [TATCTGGAGCAGAATATGATAAAGGAGCTATCCAACGTGGGTGAAGGGTGGAATACCATTCGCCGACTTAACATAGCAAACAACAGCTTCACCACTCTGCCTGGAGATAGTTTGCCCGAACAGCTCGAGCTTCTCGATGTCTCTGGCAATCAATTGACCGAGGTCGACGCAGCCTTCATAATCAAGCTGAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGCCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTACTCTACCCTCCAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTCAAGCATAACTTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTATGCCGGGCGAGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGATTCACGACGCACCATTATCATCCTCTCGCTCAACTACCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTGCGTACTTACAGTCGTTGGANGACAAGCGCAACCGCGTCATTTCCATCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM597731             [                                                                                                                                                                ccGTCGACGCAGCCTTCATAATCAAGCTAAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGCCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTACTCTACCCTCCAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTCAAGCATAACTTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTATGCCGGGCGAGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGATTCACGACGCACCATTATCATCCTCTCGCTCAACTACCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTGCGTACTTACAGTCGTTGGAGGACAAGCGCAACCGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM635649             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTATGCCGGGCGAGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGATTCACGACGCACCATTATCATCCTCTCGCTCAACTACCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTGCGTACTTACAGTCGTTGGAGGACAAGCGCAACCGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAGCTCGATCCGGAGCTCCGGGCATACCTCAAAACCAACACGTACGTCCGCTGGGACGATCCGTGGTTCTGGGACAAGCTGCACTACGCCATGCCCCACAAGCGCCGGCCGAAGGGTGTGCAGGCAACCGACAACATGCGCATGGCGTCCGTGGACAAACTAAATCTACTGAAAGCACCGGCCATCATGACACCGGCGTCATCCGAAACCACACCGCCTGTCGAACATGCCGAAAAGGGCATTGGCGCACGACGGTCCACTAGGTTGCTATGGTGACCCTTCTAAAACTTCTACGATGCCGCCATTCATCATCAGCAATGGCATGTCCAACTAGTGCTTACTTTACCCTATTTTTCAAGAGTGTTGCGTCCAATCAACAAAAG                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX611954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCCTTCTAAACCTTCTACGATGCCGCCATTCATCATCAGCAATGGCATGTCCAACTAGTGCTTACTTTACCCTA TTTTCAAGGGTGTTGCGTCCAATCAACAAAAGAACATTACTTTTGTGCAGCTAATTTACGGCATCTTATTCTTACAACTTGACTAGCATACTGCAAAATGATATTGGACGGAGACAAAATCTCATTATGAAATATGGAGGACTAATGAAATATATATATATTTTTTTTTGTAAATAGGTGCTATAACTCACAACCCTGCTGGCATCTAATAAATAGTGATAACTTTTTTTTTACTTAATCTTTATACTTTTTTTAGTAATAAAAGAAATCCCAAGAAACTGAATTGTCTCGATAAGTAAGGAAACCGGAAAAATGTATATCCTAAAAGATGAGATTTGTTGTAAAGTTGAAGAATTTGTTTTCCAGTGAAACATTGGCAATATCGGTTAGTTTCGAGTATGGAAAACGTTGTTTTGTAATAATAA]


>consensus_7807#0 TATCTGGAGCAGAATATGATAAAGGAGCTATCCAACGTGGGTGAAGGGTGGAATACCATT CGCCGACTTAACATAGCAAACAACAGCTTCACCACTCTGCCTGGAGATAGTTTGCCCGAA CAGCTCGAGCTTCTCGATGTCTCTGGCAATCAATTGACCGAGGTCGACGCAGCCTTCATA ATCAAGCTGAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGC CACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTAC TCTACCCTCCAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGT GCTTGGCCGACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCC TGCTTACTCGCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTC AAGCATAACTTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATAC GATGCATTCATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCG AGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTATGCCG GGCGAGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGATTCACGACGCACCATTATC ATCCTCTCGCTCAACTACCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTGCGTAC TTACAGTCGTTGGAGGACAAGCGCAACCGCGTCATTCCCATCATCTACCAGGATATTGGC GATATCGATCAGCTCGATCCGGAGCTCCGGGCATACCTCAAAACCAACACGTACGTCCGC TGGGACGATCCGTGGTTCTGGGACAAGCTGCACTACGCCATGCCCCACAAGCGCCGGCCG AAGGGTGTGCAGGCAACCGACAACATGCGCATGGCGTCCGTGGACAAACTAAATCTACTG AAAGCACCGGCCATCATGACACCGGCGTCATCCGAAACCACACCGCCTGTCGAACATGCC GAAAAGGGCATTGGCGCACGACGGTCCACTAGGTTGCTATGGTGACCCTTCTAAAACTTC TACGATGCCGCCATTCATCATCAGCAATGGCATGTCCAACTAGTGCTTACTTTACCCTAT TTTTCAAGAGTGTTGCGTCCAATCAACAAAAGAACATTACTTTTGTGCAGCTAATTTACG GCATCTTATTCTTACAACTTGACTAGCATACTGCAAAATGATATTGGACGGAGACAAAAT CTCATTATGAAATATGGAGGACTAATGAAATATATATATATTTTTTTTTGTAAATAGGTG CTATAACTCACAACCCTGCTGGCATCTAATAAATAGTGATAACTTTTTTTTTACTTAATC TTTATACTTTTTTTAGTAATAAAAGAAATCCCAAGAAACTGAATTGTCTCGATAAGTAAG GAAACCGGAAAAATGTATATCCTAAAAGATGAGATTTGTTGTAAAGTTGAAGAATTTGTT TTCCAGTGAAACATTGGCAATATCGGTTAGTTTCGAGTATGGAAAACGTTGTTTTGTAAT AATAA



consensusID : consensus_7807#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 857
fasta sequence
                              [GATCGCCCCGAGGNTTATAACCAGCTCTATATGATCGATAGGGATGCGTTCATATCTCAGTGCACAGTCACTAAAAATGCTCAATCTTAGCCACAACCAAGTGGCACTGCATGTAAATGGTACAGATGTATTTTATCTCGACGGTAAAACATATTATATATCCCAGACACCGTTCTACATCCTGGCTCAATTGACCGACCTGGACCTTTCGTACAACGCCATTATCAAAATATTTGGAGACTTTAAAGGCTTCATGGGAAACCTTCAATCTCTAGACCTGTCGCATAACTTAATCATGAACATTAGCGATAAAGATTTCATTTCTGTCGCCTAAAATTGAAAAGGTCAATTTGGAATCAAACCGGATTACCACTGTCACTTTCAATGACAGTAAAAAATCTACCTTCAGTCAATAGATCTATACAATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTTCCTCGTACGCTAGTAACTTATACTTCAAGATCAATTGAATGCCGGTAAATNACGTCCCGCTCAAAGGGACTTCATTGCGCTCAGCTCCCGAGCTGCTTGGACGTAAACCGCAAGAACTGTACACCTCGCAGTGCNTCTGCTCATGTACACAANTTGNATGTATTCCCTCTGGNAACTCGTACCGAACCGANGTGCAAAATNGCNACACANACGAGCNCCGAAGAANCAAGGGTGCNCACTGTAACACNNGCACCGCACGGGTCAATNCGAACCCCGAGTGCCNGGAATCCACAAAGCCCCNCGCAACAACGGGCCNNAAAAAGNTCGCACGCAGCTCCACGCANNNGACACACCGCAAAANGAGCAACAAACANGAGA]

[+] EMBL AL930215             [GATCGCCCCGAGGNTTATAACCAGCTCTATATGATCGATAGGGATGCGTTCATATCTCAGTGCACAGTCACTAAAAATGCTCAATCTTAGCCACAACCAAGTGGCACTGCATGTAAATGGTACAGATGTATTTTATCTCGACGGTAAAACATATTATATATCCCAGACACCGTTCTACATCCTGGCTCAATTGACCGACCTGGACCTTTCGTACAACGCCATTATCAAAATATTTGGAGACTTTAAAGGCTTCATGGGAAACCTTCAATCTCTAGACCTGTCGCATAACTTAATCATGAACATTAGCGATAAAGATTTCATTTCTGTCGCCTAAAATTGAAAAGGTCAATTTGGAATCAAACCGGATTACCACTGTCACTTTCAATGACAGTAAAAAATCTACCTTCAGTCAATAGATCTATACAATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTTCCTCGTACGCTAGTAACTTATACTTCAAGATCAATTGAATGCCGGTAAATNACGTCCCGCTCAAAGGGACTTCATTGCGCTCAGCTCCCGAGCTGCTTGGACGTAAACCGCAAGAACTGTACACCTCGCAGTGCNTCTGCTCATGTACACAANTTGNATGTATTCCCTCTGGNAACTCGTACCGAACCGANGTGCAAAATNGCNACACANACGAGCNCCGAAGAANCAAGGGTGCNCACTGTAACACNNGCACCGCACGGGTCAATNCGAACCCCGAGTGCCNGGAATCCACAAAGCCCCNCGCAACAACGGGCCNNAAAAAGNTCGCACGCAGCTCCACGCANNNGACACACCGCAAAANGAGCAACAAACANGAGA]


>consensus_7807#1 GATCGCCCCGAGGNTTATAACCAGCTCTATATGATCGATAGGGATGCGTTCATATCTCAG TGCACAGTCACTAAAAATGCTCAATCTTAGCCACAACCAAGTGGCACTGCATGTAAATGG TACAGATGTATTTTATCTCGACGGTAAAACATATTATATATCCCAGACACCGTTCTACAT CCTGGCTCAATTGACCGACCTGGACCTTTCGTACAACGCCATTATCAAAATATTTGGAGA CTTTAAAGGCTTCATGGGAAACCTTCAATCTCTAGACCTGTCGCATAACTTAATCATGAA CATTAGCGATAAAGATTTCATTTCTGTCGCCTAAAATTGAAAAGGTCAATTTGGAATCAA ACCGGATTACCACTGTCACTTTCAATGACAGTAAAAAATCTACCTTCAGTCAATAGATCT ATACAATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTTC CTCGTACGCTAGTAACTTATACTTCAAGATCAATTGAATGCCGGTAAATNACGTCCCGCT CAAAGGGACTTCATTGCGCTCAGCTCCCGAGCTGCTTGGACGTAAACCGCAAGAACTGTA CACCTCGCAGTGCNTCTGCTCATGTACACAANTTGNATGTATTCCCTCTGGNAACTCGTA CCGAACCGANGTGCAAAATNGCNACACANACGAGCNCCGAAGAANCAAGGGTGCNCACTG TAACACNNGCACCGCACGGGTCAATNCGAACCCCGAGTGCCNGGAATCCACAAAGCCCCN CGCAACAACGGGCCNNAAAAAGNTCGCACGCAGCTCCACGCANNNGACACACCGCAAAAN GAGCAACAAACANGAGA



consensusID : consensus_7807#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 697
fasta sequence
                              [NCACATTATNATCCTCTCGCTCAAATANCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTAGCGTACTTACAGTCGTTGGAGGACAAGCGCAAACGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAGCTCGATCCGGAGCTCCGGGCATTACCTTCGAGAGAACCGAAAGCTAACCGGTTTAACCTGGGTTTTTCGCCCCTGGGACCCTTGGTGGTGGGGAAACCTGGATAACCCTGGTTGAGGTATTCCTTGTGGTTGGTAAACCAAAACGGTGCCTTGGGCTAACGTTAACNGGAGCCTCACAATTAGTCNACTCCGCTAAGCGAAAAGGGGCCGGGCGCCGGGGCGCCCCGGGAAAANGTAGGCGGTTTGTTTAGCTATGAGACGAAGAAACGTCCCGGATAAGCCTGAAGAAACCATTNGTGCCAGGNCCCCAAACTTTTGTGGGGCCAGGTTTTCCCCCCGGGTTGGGCGTGGAACCCCANAAAGCCGTTAAAACAAGTTCCGTTAATACATTGGAAGAGCACCCGTGGCGCAATCTATTGNACCACCCCCGGGCGTTCATTCCCGAAAAACCACTAGCCCGGCGACCTGTTCTGAAACAATTGNCCCGGATAACAAAGGGGGCATTTGGCTGGCAACAGAACGGTCCACACTTAAAGTTTGCTCATTGGGTNGAA]

[+] EMBL AL933602             [NCACATTATNATCCTCTCGCTCAAATANCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTAGCGTACTTACAGTCGTTGGAGGACAAGCGCAAACGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAGCTCGATCCGGAGCTCCGGGCATTACCTTCGAGAGAACCGAAAGCTAACCGGTTTAACCTGGGTTTTTCGCCCCTGGGACCCTTGGTGGTGGGGAAACCTGGATAACCCTGGTTGAGGTATTCCTTGTGGTTGGTAAACCAAAACGGTGCCTTGGGCTAACGTTAACNGGAGCCTCACAATTAGTCNACTCCGCTAAGCGAAAAGGGGCCGGGCGCCGGGGCGCCCCGGGAAAANGTAGGCGGTTTGTTTAGCTATGAGACGAAGAAACGTCCCGGATAAGCCTGAAGAAACCATTNGTGCCAGGNCCCCAAACTTTTGTGGGGCCAGGTTTTCCCCCCGGGTTGGGCGTGGAACCCCANAAAGCCGTTAAAACAAGTTCCGTTAATACATTGGAAGAGCACCCGTGGCGCAATCTATTGNACCACCCCCGGGCGTTCATTCCCGAAAAACCACTAGCCCGGCGACCTGTTCTGAAACAATTGNCCCGGATAACAAAGGGGGCATTTGGCTGGCAACAGAACGGTCCACACTTAAAGTTTGCTCATTGGGTNGAA]


>consensus_7807#2 NCACATTATNATCCTCTCGCTCAAATANCTCGAGTCTGTGTGGGGTCAGATGGAGTTTAA CACTAGCGTACTTACAGTCGTTGGAGGACAAGCGCAAACGCGTCATTCCCATCATCTACC AGGATATTGGCGATATCGATCAGCTCGATCCGGAGCTCCGGGCATTACCTTCGAGAGAAC CGAAAGCTAACCGGTTTAACCTGGGTTTTTCGCCCCTGGGACCCTTGGTGGTGGGGAAAC CTGGATAACCCTGGTTGAGGTATTCCTTGTGGTTGGTAAACCAAAACGGTGCCTTGGGCT AACGTTAACNGGAGCCTCACAATTAGTCNACTCCGCTAAGCGAAAAGGGGCCGGGCGCCG GGGCGCCCCGGGAAAANGTAGGCGGTTTGTTTAGCTATGAGACGAAGAAACGTCCCGGAT AAGCCTGAAGAAACCATTNGTGCCAGGNCCCCAAACTTTTGTGGGGCCAGGTTTTCCCCC CGGGTTGGGCGTGGAACCCCANAAAGCCGTTAAAACAAGTTCCGTTAATACATTGGAAGA GCACCCGTGGCGCAATCTATTGNACCACCCCCGGGCGTTCATTCCCGAAAAACCACTAGC CCGGCGACCTGTTCTGAAACAATTGNCCCGGATAACAAAGGGGGCATTTGGCTGGCAACA GAACGGTCCACACTTAAAGTTTGCTCATTGGGTNGAA



consensusID : consensus_7807#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 634
fasta sequence
                              [GCAGATTCCCCGAGGTTAACTTCACACTCTGCCTGGAGATAGTTTGNCCGAACAGCTCGAGCTTCTTGATGTCTCTGGCAATCAATTGACCGAGGTCGACGCAGCCTTCATAATCAAGCTAAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGCCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTACTCTACCTCCAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTCAAGCATAACTTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTCATGCCGGGCGAGGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGA]

[+] EMBL AL694618             [GCAGATTCCCCGAGGTTAACTTCACACTCTGCCTGGAGATAGTTTGNCCGAACAGCTCGAGCTTCTTGATGTCTCTGGCAATCAATTGACCGAGGTCGACGCAGCCTTCATAATCAAGCTAAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGCCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTACTCTACCTCCAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTCAAGCATAACTTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAGAGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTCATGCCGGGCGAGGATGATTGCCACCCAGATAACGAAAGCGGTCGAGGA]


>consensus_7807#3 GCAGATTCCCCGAGGTTAACTTCACACTCTGCCTGGAGATAGTTTGNCCGAACAGCTCGA GCTTCTTGATGTCTCTGGCAATCAATTGACCGAGGTCGACGCAGCCTTCATAATCAAGCT AAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTGCCACTGTGA AAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGGCTACTCTACCTC CAGTGCTCCGACGGTCAACCGATCAACTCGGCTACACTAAATGATCTGTGTGCTTGGCCG ACAACGCTTAAATTTTATATCAGCGCGGCAGTTTCACTGGTACTTGCTGCCTGCTTACTC GCCATCTGGTTGTACATGAAATACAGCCTGGAGATCAAAGTGTGGCTCTTCAAGCATAAC TTGCTGCAGTGGTTGGTCACGGAGGAGCAAATCGATATGGATAAGCGATACGATGCATTC ATTTCATACTCGCACAAGGATGAGGAGTTCGTCACAGACCAGCTGTTACCGAGGCTTGAG AGCGAAGAGCTCAACTTCAAAATCTGCTGGCACGTGCGTGACTTTCATGCCGGGCGAGGA TGATTGCCACCCAGATAACGAAAGCGGTCGAGGA



consensusID : consensus_7807#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 473
fasta sequence
                              [CCGATTGAAAAGGTCAATTTGGAATCAAACCGGATTACCATGTTCACTTTCAATGACAGTAAAAAATCTACCTTCAGTAATAGATCTATAAATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTTCCTCGTCGCTAGTAACTTATCTTCAAGATCAATTGAATGCCGGTAAATTCGTCCCGCTAAAGGGACTTCATTGCGCTCAGCCTCCCGAGCTGCTTGGACGTAAACCGCAAGACCTGTCCCTCGAGGATCTGCTATGTAAAATTGATGTATCCTCTGGTTTCTGTCCGACCGAGTGCAAATGCTACAAACGAGCCGTAGATCAGGGTGCTATTGTAAACTGCACCGCTGCTAATCTAACCCGAGTGCCTGTTATCAAAAGCCCCTCGATCGTCGGTCGAAATATGATCGAGCTGTATCTGGAGCAGAATATGATAAAGGAGCTATCCAA]

[+] EMBL BM593186             [CCGATTGAAAAGGTCAATTTGGAATCAAACCGGATTACCATGTTCACTTTCAATGACAGTAAAAAATCTACCTTCAGTAATAGATCTATAAATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTTCCTCGTCGCTAGTAACTTATCTTCAAGATCAATTGAATGCCGGTAAATTCGTCCCGCTAAAGGGACTTCATTGCGCTCAGCCTCCCGAGCTGCTTGGACGTAAACCGCAAGACCTGTCCCTCGAGGATCTGCTATGTAAAATTGATGTATCCTCTGGTTTCTGTCCGACCGAGTGCAAATGCTACAAACGAGCCGTAGATCAGGGTGCTATTGTAAACTGCACCGCTGCTAATCTAACCCGAGTGCCTGTTATCAAAAGCCCCTCGATCGTCGGTCGAAATATGATCGAGCTGTATCTGGAGCAGAATATGATAAAGGAGCTATCCAA]


>consensus_7807#4 CCGATTGAAAAGGTCAATTTGGAATCAAACCGGATTACCATGTTCACTTTCAATGACAGT AAAAAATCTACCTTCAGTAATAGATCTATAAATACTCCAAGACAAATCCTTCTTGCAGAT AATTCACTCAACTGTGACTGTATTTCCTCGTCGCTAGTAACTTATCTTCAAGATCAATTG AATGCCGGTAAATTCGTCCCGCTAAAGGGACTTCATTGCGCTCAGCCTCCCGAGCTGCTT GGACGTAAACCGCAAGACCTGTCCCTCGAGGATCTGCTATGTAAAATTGATGTATCCTCT GGTTTCTGTCCGACCGAGTGCAAATGCTACAAACGAGCCGTAGATCAGGGTGCTATTGTA AACTGCACCGCTGCTAATCTAACCCGAGTGCCTGTTATCAAAAGCCCCTCGATCGTCGGT CGAAATATGATCGAGCTGTATCTGGAGCAGAATATGATAAAGGAGCTATCCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7807#1      GATCGCCCCGAGGNTTATAACCAGCTCTATATGATCGATAGGGATGCGTTCATATCTCAG 60
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      ------------------------------------------------------------
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      TGCACAGTCACTAAAAATGCTCAATCTTAGCCACAACCAAGTGGCACTGCATGTAAATGG 120
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      -----------------------------------------------------------T 1
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      TACAGATGTATTTTATCTCGACGGTAAAACATATTATATATCCCAGACACCGTTCTACAT 180
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      ATCTGGAGCAGAATATGATAAAGGAGCTATCCAACGTGGGTGAAGGGTGGAATACCATTC 61
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------NCACATTATNATCCTCTCGCTCAAATANCT 30
                                                                                  

consensus_7807#1      CCTGGCTCAATTGACCGACCTGGACCTTTCGTACAACGCCATTATCAAAATATTTGGAGA 240
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      GCCGACTTAACATAGCAAACAACAGCTTCACCACTCTGCCTGGAGATAGTTTGCCCGAAC 121
consensus_7807#3      ------GCAGATTCCCCGAGGTTAACTTCAC-ACTCTGCCTGGAGATAGTTTGNCCGAAC 53
consensus_7807#2      CGAGTCTGTGTGGGGTCAGATGGAGTTTAACACTAGCGTACTTACAGTCGTTGGAGGACA 90
                                                                                  

consensus_7807#1      CTTTAAAGGCTTCATGGGAAACCTTCAATCTCTAGACCTGTCGCATAACTTAATCATGAA 300
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      AGCTCGAGCTTCTCGATGTCTCTGGCAATCAATTGACCGA--GGTCGACGCAGCCTTCAT 179
consensus_7807#3      AGCTCGAGCTTCTTGATGTCTCTGGCAATCAATTGACCGA--GGTCGACGCAGCCTTCAT 111
consensus_7807#2      AGCGCAAACGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAG-CTCGAT 149
                                                                                  

consensus_7807#1      CATTAGCGATAAAGATTTCATT-TCTGTCGCCTAAAATTGAAAAGGTCAATTTGGAATCA 359
consensus_7807#4      ---------------------------------CCGATTGAAAAGGTCAATTTGGAATCA 27
consensus_7807#0      AATCAAGCTGAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTG 239
consensus_7807#3      AATCAAGCTAAATCATACCGCTCTCCGAAACATCAGCCTGTCAGCGAATCCTTGGGATTG 171
consensus_7807#2      CCGGAGCTCCGGGCATTACCTTCGAGAGAACCGAAAGCTAACCGGTTTAACCTGGGTTTT 209
                                                            *             ***  *  

consensus_7807#1      AACCGGATTACCACTGTCACTTTCAATGACAGTAAAAAATCTACCTTCAGTCAATAGATC 419
consensus_7807#4      AACCGGATTACCATGTTCACTTTCAATGACAGTAAAAAATCTACCTTCAGT-AATAGATC 86
consensus_7807#0      CCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGG--C 297
consensus_7807#3      CCACTGTGAAAATCCACTGCTTGCGTTCGCCGTCGATAATGCAGCACGCATTACTGG--C 229
consensus_7807#2      TCGCCCCTGGGACCCTTGGTGGTGGGGAAACCTGGATAACCCTGGTTGAGGTATTCCTTG 269
                         *                            *  * **             * *     

consensus_7807#1      TATACAATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTT 479
consensus_7807#4      TATA-AATACTCCAAGACAAATCCTTCTTGCAGATAATTCACTCAACTGTGACTGTATTT 145
consensus_7807#0      TACTCTACCCTCCAGTGC---TCCGACGGTCAACCGATCAACTCGGCTAC-ACTAAATGA 353
consensus_7807#3      TACTCTACC-TCCAGTGC---TCCGACGGTCAACCGATCAACTCGGCTAC-ACTAAATGA 284
consensus_7807#2      TGGTTGGTAAACCAAAACGGTGCCTTGGGCTAAC--GTTAACNGGAGCCTCAC-AATTAG 326
                      *          ***   *    **       *     *  **         **    *  

consensus_7807#1      CCTCGTACGCT-AGTAACTTATACTTCAAGATCAATTGAATGCCGGTAAATNACGTCCCG 538
consensus_7807#4      CCTCGT-CGCT-AGTAACTTAT-CTTCAAGATCAATTGAATGCCGGTAAATT-CGTCCCG 201
consensus_7807#0      TCT-GTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGC-GGCA------GTTTCA 405
consensus_7807#3      TCT-GTGTGCTTGGCCGACAACGCTTAAATTTTATATCAGCGC-GGCA------GTTTCA 336
consensus_7807#2      TCNACTCCGCTAAGCGAAAAGGGGCCGGGCGCCGGGGCGCCCCGGGAAAANGTAGGCGGT 386
                       *   *  ***  *                            * ** *      *     

consensus_7807#1      CTCAAAGGGACTTCATTGCGCTCAGC-TCCCGAGCTGCTTGGACGTAAACCGCAAGAACT 597
consensus_7807#4      CT-AAAGGGACTTCATTGCGCTCAGCCTCCCGAGCTGCTTGGACGTAAACCGCAAGACCT 260
consensus_7807#0      CT----GGTACTT-GCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAG--CCT 458
consensus_7807#3      CT----GGTACTT-GCTGCCTGCTTACTCGCCATCTGGTTGTACATGAAATACAG--CCT 389
consensus_7807#2      TT--GTTTAGCTATGAGACGAAGAAACGTCCCGGATAAGCCTGAAGAAACCATTNGTGCC 444
                       *        **      *           *    *           **         * 

consensus_7807#1      GTACACCTCGCAGTGCNTCTGCTCATGTACACAANTTGNATGTATTCCCTCTGGNAAC-T 656
consensus_7807#4      GTCC--CTCGAGG---ATCTGCT-ATGTA---AAATTGA-TGTAT--CCTCTGGT----T 304
consensus_7807#0      GGAGA--TCAAAGTGTGGCTCTTCAAGCA--TAACTTGC-TGCAG--TGGTTGGTCACGG 511
consensus_7807#3      GGAGA--TCAAAGTGTGGCTCTTCAAGCA--TAACTTGC-TGCAG--TGGTTGGTCACGG 442
consensus_7807#2      AGGNC-CCCAAACT---TTTGTGGGGCCA---GGTTTTCCCCCCG---GGTTGGGCGTGG 494
                              *          *        *      **              ***      

consensus_7807#1      CGTACCGAACCGANGTGCAAAATNGCNACAC---ANACGAGCNCCGAAGAANCAAGGGTG 713
consensus_7807#4      TCTGTCCGACCGAG-TGCAAA--TGCTACA-----AACGAGCCGT----AGATCAGGGTG 352
consensus_7807#0      AGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATG 571
consensus_7807#3      AGGAGCAAATCGATATGGATAAGCGATACGATGCATTCATTTCATACTCGCACAAGGATG 502
consensus_7807#2      AACCCCANAAAGCCGTTAAAACAAGTTCCGTT---AATACATTGGAAGAGCACCCGTG-G 550
                           *  *  *   *  * *   *   *                          *   *

consensus_7807#1      CNCACTGTAACACNNGCACCGCACGGGTCAA--TNCGAAC-CCCGAGTGCCNGGAATCCA 770
consensus_7807#4      CT-ATTGTAAA--CTGCACCGCT---GCTAA--TCTAA---CCCGAGTGCCTGTTATCAA 401
consensus_7807#0      AGGAGTTCGTCA-CAGACCAGCTGTTACCGAGGCTTGAGA-GCGAAGAGCTCAACTTCAA 629
consensus_7807#3      AGGAGTTCGTCA-CAGACCAGCTGTTACCGAGGCTTGAGA-GCGAAGAGCTCAACTTCAA 560
consensus_7807#2      CGCAATCTATTGNACCACCCCCGGGCGTTCATTCCCGAAAAACCACTAGCCCGGCGACCT 610
                         * *            *  *        *      *    *     **       *  

consensus_7807#1      CAAAGCCCCNCGCAACAACGGGCCNNAAAAAGNTCGCACGCAGCTCC-ACGCANNNGA-C 828
consensus_7807#4      --AAGCCCCTCG--ATCGTCGGTCGAAATATGATCG-----AGCTGT-ATCTGGAGCA-G 450
consensus_7807#0      AATCTGCTGGCACGTGCGTGACTTT-ATGCCGGGCGAG-ATGATTGCCACCCAGATAACG 687
consensus_7807#3      AATCTGCTGGCACGTGCGTGACTTTCATGCCGGGCGAGGATGATTGCCACCCAGATAACG 620
consensus_7807#2      GTTCTGAAACAATTGNCCCGGATAACAAAGGGGGCATT--TGGCTGGCAACAGAACGG-- 666
                                                *    *  *         *   *           

consensus_7807#1      ACACCGCAAAANGAGCAACAAACANGAGA------------------------------- 857
consensus_7807#4      AATATGATAAAGGAGCTATCCAA------------------------------------- 473
consensus_7807#0      AAAGCGGTCGAGGATTCACGACGCACCATTATCATCCTCTCGCTCAACTACCTCGAGTCT 747
consensus_7807#3      AAAGCGGTCGAGGA---------------------------------------------- 634
consensus_7807#2      TCCACACTTAAAGTTTGCTCATTGGGTNGAA----------------------------- 697
                                * *                                               

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      GTGTGGGGTCAGATGGAGTTTAACACTGCGTACTTACAGTCGTTGGAGGACAAGCGCAAC 807
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      CGCGTCATTCCCATCATCTACCAGGATATTGGCGATATCGATCAGCTCGATCCGGAGCTC 867
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      CGGGCATACCTCAAAACCAACACGTACGTCCGCTGGGACGATCCGTGGTTCTGGGACAAG 927
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      CTGCACTACGCCATGCCCCACAAGCGCCGGCCGAAGGGTGTGCAGGCAACCGACAACATG 987
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      CGCATGGCGTCCGTGGACAAACTAAATCTACTGAAAGCACCGGCCATCATGACACCGGCG 1047
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      TCATCCGAAACCACACCGCCTGTCGAACATGCCGAAAAGGGCATTGGCGCACGACGGTCC 1107
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      ACTAGGTTGCTATGGTGACCCTTCTAAAACTTCTACGATGCCGCCATTCATCATCAGCAA 1167
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      TGGCATGTCCAACTAGTGCTTACTTTACCCTATTTTTCAAGAGTGTTGCGTCCAATCAAC 1227
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      AAAAGAACATTACTTTTGTGCAGCTAATTTACGGCATCTTATTCTTACAACTTGACTAGC 1287
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      ATACTGCAAAATGATATTGGACGGAGACAAAATCTCATTATGAAATATGGAGGACTAATG 1347
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      AAATATATATATATTTTTTTTTGTAAATAGGTGCTATAACTCACAACCCTGCTGGCATCT 1407
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      AATAAATAGTGATAACTTTTTTTTTACTTAATCTTTATACTTTTTTTAGTAATAAAAGAA 1467
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      ATCCCAAGAAACTGAATTGTCTCGATAAGTAAGGAAACCGGAAAAATGTATATCCTAAAA 1527
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      ------------------------------------------------------------
consensus_7807#4      ------------------------------------------------------------
consensus_7807#0      GATGAGATTTGTTGTAAAGTTGAAGAATTTGTTTTCCAGTGAAACATTGGCAATATCGGT 1587
consensus_7807#3      ------------------------------------------------------------
consensus_7807#2      ------------------------------------------------------------
                                                                                  

consensus_7807#1      --------------------------------------
consensus_7807#4      --------------------------------------
consensus_7807#0      TAGTTTCGAGTATGGAAAACGTTGTTTTGTAATAATAA 1625
consensus_7807#3      --------------------------------------
consensus_7807#2      --------------------------------------
                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)