These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_785#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 313 fasta sequence [GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAGCATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGATAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTGTAAAACTGTGTAAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTACGACATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTTAGTCCATCATTTACA] [+] EMBL AGA281088 [GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAGCATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGATAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTGTAAAACTGTGTAAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTACGACATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTTAGTCCATCATTTACA] consensusID : consensus_785#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 226 fasta sequence [ACTTCATTGAACTCTAGCTAGATTTGTTCGTTTTTTGCGATTGAGGCACTGCATATATCACGCGATACATTTAGAAGTTAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTCTAGTTAAAATGACGTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGCGAGTTCAAAGTGTAAATGATGGACTAAATTGTTATCTAAAATAGTA] [+] EMBL AGA282715 [ACTTCATTGAACTCTAGCTAGATTTGTTCGTTTTTTGCGATTGAGGCACTGCATATATCACGCGATACATTTAGAAGTTAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTCTAGTTAAAATGACGTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGCGAGTTCAAAGTGTAAATGATGGACTAAATTGTTATCTAAAATAGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_785#0 GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAG 60 consensus_785#1 -------------------------------------------ACTTCATTGAACTCTAG 17 ** * ** ** consensus_785#0 CATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGA 120 consensus_785#1 CTAGATTTGTTCGTTTT--TTGCGATTGAGGCACTGCATATATCACGCGATACATTTAGA 75 * ** * * * ** * * * * * * * *** ** consensus_785#0 TAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTG--TAAAACTGT 178 consensus_785#1 -AGT-TAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTCTAGTTAAAATGAC 133 *** * ****** * * * * * * ** * * * ***** consensus_785#0 GTAAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTAC 238 consensus_785#1 GTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGCGAGTTCAAAGTGT 193 **** **** *** * * ***** * * * * *** ** consensus_785#0 GACATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTT 298 consensus_785#1 AA-ATGATGGACTAAATTGTTATCTAAAATAGTA-------------------------- 226 * ** * *** * * * * ** consensus_785#0 AGTCCATCATTTACA 313 consensus_785#1 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||