These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7852#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1031 fasta sequence [AATCGGCCGAGGTCAATCTTGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG-GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG-CCGGGATGCAGAATATCCACCGCCCGA-GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA-GACGGG-TGTTACTGAGGAAGCGATCAA-G-AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA-CTGTCTCTTCCACG-AGGCCAAGGTGGTGGACGA-CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT-CGATGCACGACATCGCGATGCACATGGGCAAGC-GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGT-AAAAAAAA------ATCACAAAACGGATCGTCCGACCACCGGCTAAAGGAATGTACGATCAAACGATCCACACCTTTCCCCCGACAAAGGATAATTCTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTCGCTCCCGC-TTTCCCGACCG-GCCCGCGCGTCACTCACGGCGTAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAATTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCTGCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAACTTGAAAACTGCATACACTCAGACTGGTGTGCCGGCATTGAGAAACAACTGCAAAGCAAAAAAAAAAAAAA] [+] EMBL AL934616 [AATCGGCCGAGGTCAATCTTGTGTCGTCTCTCCGGTCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACGTAGTTCTAGAGCCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTGATTGTGCTGCTCCATGACATTGGGCGACACTACACCCCGACCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAACGACGGGCTGTTACTGAGGAAGCGATCAACG AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCG ] [+] EMBL AF437884 [ tgtttaAATCTTGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGT AAAAAAAA ATCACAAAACGGATCGTCCGACCACCGGCTAAGGGAATGTACGATCAAACGATCCACACCTTTCCCCCGAGAAAGGATAATTCTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACAGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTCACGACCTGTCGCTCCCGC TTTCCCGACCG GCCCGCGCGTCACTCACGGCGTAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAATTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCTGCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAACTTGAAAACTGCATACACTCAGACTGGTGTGCCGGCATTGAGAAACAACTGCAAAGCAAAAAAAAAAAAAA] [+] EMBL CNS08S4O [ TGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA GCAAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAG ] [+] EMBL CNS09GFV [ TGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGCGGGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGTAAAAAAAAA ATCACAAAACGGATCGTCCGGCCACCGGCAAAAGGAA ] [+] EMBL BX622496 [ CATGAAGCTAGTGACCTTCGTGTTTGCTGTCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AAGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGT AAAAAAAAAAAAATATCACAAAACGGATCGTCCGACCACCGGCTAAAGGAATGTACGATCAAACGATCCACACCTTTCCCCCGACAAAGGATAATTCTTTTACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCCACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTCGGTCCCGCTTTTCCCGACCG ] [+] EMBL AL932824 [ gTATCCACCGGCCGAGGTTGCTGGAGGCACTGAAACCACTGGACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAAGCTGTCTCTTCCACGAAGGCCAAGGTGGTGGACGACCAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCTACGATGCACGACATCGCGATGCACA ] [-] EMBL CNS09GFW [ CTTTCCCCCGACAAAGGATAATTTTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTTGCTCCCGC ] [-] EMBL CNS08S4P [ TCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGCTGCTCCCGC TTTCCCGACCGCGGGC CGCGTCACTCACGGCGAAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAATTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCTGCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAACTTGAAAACTGCATACACTCAGACTGGTG GCCGGCATTGAGAAACAA ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||