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Anopheles gambiae
cluster # 7858 cluster # 7858       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7858#0 length = 738 sequences # 2  
consensus_7858#1 length = 688 sequences # 2  
consensus_7858#2 length = 680 sequences # 2  
consensus_7858#3 length = 606 sequences # 1  
consensus_7858#4 length = 551 sequences # 1  

consensusID : consensus_7858#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 738
fasta sequence
                              [CCGGTTATCCCCGTTCAAGAGCAAAAGCAAAAGACGTCCAGTTTTGTTGCGGTACCCCGGTAAATACGGACAACCATCTCTCCTGCCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCTGCAACCATGTCGAACCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACCTTCATCGGCACGTACATTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTACATCAGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGCTGTGTGCTGCTTGGCATCACAATCTACGTGCGCTACCGGCAGATACAGGAGCTGTCGTTCCGGCACAGTGACGTCCGGCAGGCGCTGGGCCGGTGCAGCGGCATCGGCTTCTGGATCGGTATCGGCAGCTGTCTCGGCATCAGCATCGTCGGCAACTTCCAGGAGACGAACGTGCGGATCGTCCACTACGTCGGCGCGTTCCTGAGCTTCGGGCTCGGCACGGTGTACTTCTGGATACAGTCGTACATCTCGTACTACATCCAGCCGTACATGGGCACGATGCAGAAGGCGAACCTGCGCATGGCCCTGTCGGTGGTGTGCACCGTGTTCTTCATGATCGTCGCGGTGACGGGCGTCATCTCGCACATCCTGTTCCGCGGGACGGACCCCCGCAAGTGGTACCCGTCGGACGGGGGCTGGGAGTATCACGTGGCC]

[+] EMBL BM603985             [CCGGTTATCCCCGTTCAAGAGCAAAAGCAAAAGACGTCCAGTTTTGTTGCGGTACCCCGGTAAATACGGACAACCATCTCTCCTGCCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCTGCAACCATGTCGAACCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACCTTCATCGGCACGTACATTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTACATCAGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGCTGTGTGCTGCTTGGCATCACAATCTACGTGCGCTACCGGCAGATACAGGAGCTGTCGTTCCGGCACAGTGACGTCCGGCAGGCGCTGGGCCGGTGCAGCGGCATCGGCTTCTGGATCGGTATCGGCAGCTGTCTCGGCATCAGCATCGTCGGCAACTTCCA                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX603959             [                                                                                                                                                                                                                        CATGTGGTGCCGACGGTACCGTACATCAGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGCTGTGTGCTGCTTGGCATCACAATCTACGTGCGCTACCGGCAGATACAGGAGCTGTCGTTCCGGCACAGTGACGTCCGGCAGGCGCTGGGCCGGTGCAGCGGCATCGGCTTCTGGATCGGTATTGGCAGCTGTCTCGGCATCAGCATCGTCGGCAACTTCCAGGAGACGAACGTGCGGATCGTCCACTACGTCGGCGCGTTCCTGAGCTTCGGGCTCGGCACGGTGTACTTCTGGATACAGTCGTACATCTCGTACTACATCCAGCCGTACATGGGCACGATGCAGAAGGCGAACCTGCGCATGGCCCTGTCGGTGGTGTGCACCGTGTTCTTCATGATCGTCGCGGTGACGGGCGTCATCTCGCACATCCTGTTCCGCGGGACGGACCCCCGCAAGTGGTACCCGTCGGACGGGGGCTGGGAGTATCACGTGGCC]


>consensus_7858#0 CCGGTTATCCCCGTTCAAGAGCAAAAGCAAAAGACGTCCAGTTTTGTTGCGGTACCCCGG TAAATACGGACAACCATCTCTCCTGCCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCT GCAACCATGTCGAACCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACC TTCATCGGCACGTACATTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTAC ATCAGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATC GGCTGTGTGCTGCTTGGCATCACAATCTACGTGCGCTACCGGCAGATACAGGAGCTGTCG TTCCGGCACAGTGACGTCCGGCAGGCGCTGGGCCGGTGCAGCGGCATCGGCTTCTGGATC GGTATCGGCAGCTGTCTCGGCATCAGCATCGTCGGCAACTTCCAGGAGACGAACGTGCGG ATCGTCCACTACGTCGGCGCGTTCCTGAGCTTCGGGCTCGGCACGGTGTACTTCTGGATA CAGTCGTACATCTCGTACTACATCCAGCCGTACATGGGCACGATGCAGAAGGCGAACCTG CGCATGGCCCTGTCGGTGGTGTGCACCGTGTTCTTCATGATCGTCGCGGTGACGGGCGTC ATCTCGCACATCCTGTTCCGCGGGACGGACCCCCGCAAGTGGTACCCGTCGGACGGGGGC TGGGAGTATCACGTGGCC



consensusID : consensus_7858#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence
                              [TTTTATTTCATCACTAGCGAATTATTACGAGCATTGGTATTTGTTCTCCATTCTGCTATAACACAGCTCATTGTTGTTTCTTCCTTACCCTACCGATCTTGCTCCAACGCTTCTGTACCAGACTTCATTTTCAACAAATAACTGCATGCTTCACTCGCTTAAAGATGCTCGATCCTAACTGCTGAGCATTCGAGAGCTAAGTGGGATAAGAGAGGTGGTGCTAAGAGACTAAGAGAAATAAAACAACCAAATTGCCTTTTTGTTCAAACCTAATATTACTCCTCGCCACACTAAATCCCCAACATGGTGGCCTTCTTCTTGTAAATATTAAATAAAAGTGTGCATGTAACAACACTAACTTCCTTCCTATAATATCGCTAAATGGGATTGCTAGGATGCAGGGTGACCACTATCGGTCGCAGGGGGAAGTGGAAAACCGGAACACGACGTACGATCAAATGTAGCTCTGCCGCAGGCTGTCACTAAAGTAAAGGGTAAGGGAGTGCAGTGCTTCCATCAGGGCGACGGGCGGATGGTTCGCAACACTGCACCCGGCCGACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGGGAGCGCTTTTGGCCGCCGGCGAACCGTACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTTGAGATCAGTATCGCTGCGGACGCGTGGGTC]

[+] EMBL AGA280033            [TTTTATTTCATCACTAGCGAATTATTACGAGCATTGGTATTTGTTCTCCATTCTGCTATAACACAGCTCATTGTTGTTTCTTCCTTACCCTACCGATCTTGCTCCAACGCTTCTGTACCAGACTTCATTTTCAACAAATAACTGCATGCTTCACTCGCTTAAAGATGCTCGATCCTAACTGCTGAGCATTCGAGAGCTAAGTGGGATAAGAGAGGTGGTGCTAAGAGACTAAGAGAAATAAAACAACCAAATTGCCTTTTTGTTCAAACCTAATATTACTCCTCGCCACACTAAATCCCCAACATGGTGGCCTTCTTCTTGTAAATATTAAATAAAAGTGTGCATGTAACAACACTAACTTCCTTCCTATAATATCGC                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BM639758             [                                                                                                                                                                                          CATTCGAGAGCTAAGTGGGATAAGAGAGGTGGTGCTAAGAGACTAAGAGAAATAAAACAACCAAATTGCCTTTTTGTTCAAACCTAATATTACTCCTCGCCACACTAAATCCCCAACATGGTGGCCTTCTTCTTGTAAATATTAAATAAAAGTGTGCATGTAACAACACTAACTTCCTTCCTATAATATCGCTAAATGGGATTGCTAGGATGCAGGGTGACCACTATCGGTCGCAGGGGGAAGTGGAAAACCGGAACACGACGTACGATCAAATGTAGCTCTGCCGCAGGCTGTCACTAAAGTAAAGGGTAAGGGAGTGCAGTGCTTCCATCAGGGCGACGGGCGGATGGTTCGCAACACTGCACCCGGCCGACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGGGAGCGCTTTTGGCCGCCGGCGAACCGTACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTTGAGATCAGTATCGCTGCGGACGCGTGGGTC]


>consensus_7858#1 TTTTATTTCATCACTAGCGAATTATTACGAGCATTGGTATTTGTTCTCCATTCTGCTATA ACACAGCTCATTGTTGTTTCTTCCTTACCCTACCGATCTTGCTCCAACGCTTCTGTACCA GACTTCATTTTCAACAAATAACTGCATGCTTCACTCGCTTAAAGATGCTCGATCCTAACT GCTGAGCATTCGAGAGCTAAGTGGGATAAGAGAGGTGGTGCTAAGAGACTAAGAGAAATA AAACAACCAAATTGCCTTTTTGTTCAAACCTAATATTACTCCTCGCCACACTAAATCCCC AACATGGTGGCCTTCTTCTTGTAAATATTAAATAAAAGTGTGCATGTAACAACACTAACT TCCTTCCTATAATATCGCTAAATGGGATTGCTAGGATGCAGGGTGACCACTATCGGTCGC AGGGGGAAGTGGAAAACCGGAACACGACGTACGATCAAATGTAGCTCTGCCGCAGGCTGT CACTAAAGTAAAGGGTAAGGGAGTGCAGTGCTTCCATCAGGGCGACGGGCGGATGGTTCG CAACACTGCACCCGGCCGACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGGG AGCGCTTTTGGCCGCCGGCGAACCGTACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTTGA GATCAGTATCGCTGCGGACGCGTGGGTC



consensusID : consensus_7858#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 680
fasta sequence
                              [CCGCCCACGCGTCCGGTTCTGGTACGTTTTCGTTCGTGTTTAGGAGCCGTTTTTTTCCCCGTAGTGCAATTGCACAATTACAATTCGCATCGCAATCGACACAACACAAGCAACGCGTACGGTGAATCCCTGCCCACCCACACGATGTGCAACTAAGCGCGTGGTTCGGCTCGAGGCATCACCGAGGCTGCACCGTTTGGCATGAGTCAGCTACAGCACTAGCACCTAACACTCTTGCCCCGATGACAGAACTCGGGCAAGGGATAGAGTGAAGCTGCGTTTTGTGTGTGTTTTCCCCGTTCAAGAGCAAAAGCAAAAAACGTCCAGTTTTGTTGCGGTACCCCGGTAAATACGGACAACCATCTCTCCTGCCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCTGCAACCATGTCGAACCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACCTTCATCGGCACGTTAGTATTGCGTATCTCTGCTCGAATGCCCTTTCCGCCTGCTAAATCGCCTTGGGCTTTCACCGTTTCAGGTACATTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTACATCAGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGCTGTGTGCTGCGTAAGTAGAG]

[+] EMBL BM613923             [CCGCCCACGCGTCCGGTTCTGGTACGTTTTCGTTCGTGTTTAGGAGCCGTTTTTTTCCCCGTAGTGCAATTGCACAATTACAATTCGCATCGCAATCGACACAACACAAGCAACGCGTACGGTGAATCCCTGCCCACCCACACGATGTGCAACTAAGCGCGTGGTTCGGCTCGAGGCATCACCGAGGCTGCACCGTTTGGCATGAGTCAGCTACAGCACTAGCACCTAACACTCTTGCCCCGATGACAGAACTCGGGCAAGGGATAGAGTGAAGCTGCGTTTTGTGTGTGTTTTCCCCGTTCAAGAGCAAAAGCAAAAAACGTCCAGTTTTGTTGCGGTACCCCGGTAAATACGGACAACCATCTCTCCTGCCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCTGCAACCATGTCGAACCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACCTTCATCGGCACGTTAGTATTGCGTATCTCTGCTCGAATGCCCTTTCCGCCTGCTAAATCGCCTTGGGCTTTCACCGTTTCAGGTACATTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTACATCAGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGCTGTGTGCTGCGTAAGTAGAG]
[+] EMBL AGA281729            [                                                                                               TCGACACAACACAAGCAACGCGTACGGTGAATCCCTGCCCACCCACACGATGTGCAACTAAGCGCGTGGTTCGGCTCGAGGCATCACCGAGGCTGCACCGTTTGGCATGAGTCAGCTACAGCACTAGCACCTAACACTCTTGCCCCGATGACAGAACTCGGGCAAGGGATAGAGTGAAGCTGCGTTTTGTGTGTGTTTTCCCCGTTCAAGAGCAAAAGGAAAAGACGTCCAGTTTTGTTGCGGTACCCCGGTAAATACGGACAACCATCTCTCCAACCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCTGCAACCATGTCGAACCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACCTTCATCGGCACG TA CATTGCcgcagt                                                                                                                                                                                          ]


>consensus_7858#2 CCGCCCACGCGTCCGGTTCTGGTACGTTTTCGTTCGTGTTTAGGAGCCGTTTTTTTCCCC GTAGTGCAATTGCACAATTACAATTCGCATCGCAATCGACACAACACAAGCAACGCGTAC GGTGAATCCCTGCCCACCCACACGATGTGCAACTAAGCGCGTGGTTCGGCTCGAGGCATC ACCGAGGCTGCACCGTTTGGCATGAGTCAGCTACAGCACTAGCACCTAACACTCTTGCCC CGATGACAGAACTCGGGCAAGGGATAGAGTGAAGCTGCGTTTTGTGTGTGTTTTCCCCGT TCAAGAGCAAAAGCAAAAAACGTCCAGTTTTGTTGCGGTACCCCGGTAAATACGGACAAC CATCTCTCCTGCCCACTCTGGTGAAGCGTATCGAGCGGAGGGAGCTGCAACCATGTCGAA CCTTTACCTACTTCCAATCTCCGTGTTTTTGCTGTTCAATTTCACCTTCATCGGCACGTT AGTATTGCGTATCTCTGCTCGAATGCCCTTTCCGCCTGCTAAATCGCCTTGGGCTTTCAC CGTTTCAGGTACATTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTACATC AGCGATGCGGCCACCTACTCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGC TGTGTGCTGCGTAAGTAGAG



consensusID : consensus_7858#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence
                              [CAGCGAGCCAAGCTTGCCCGCCGCGACGGGCGGATGGTTCGCAACACTGCACCCCGGCCGACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGGGAGCGCTTTTGGCCGCCGGCGAACCGAACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTTGAGATCAGTATCGCTGAAGGATCGCACCGGACGGTGTTTTTGGTTGCTACTAGCACCATCCCCGTCCTCACCCCCGCCCCCATCGTCGTCAGCGGGTGCGCCCGGTCGGCTAAGGCTGTGCGTTGATGCTCGCAGGCTGGTGCGCTCGTTGCCATCGTGCCGCGATTCAAATCACGAGATAACGGCTACGGGCGCATCGTTGATGACCGGTTCGTACGTTCGCGACGAGTCAATTTCCAGCAGAATAAGCGGCGGATGATCCAGCTGCATCGTGCGGAACTCGTCCGTGAACGTGAGCACGTAGAAGCAGAAGGCGGTCGCGACGATCCACTCCGAGATCGAGCTGGCCACGTGATACTCCCAGCCCCCGTCCGACGGGTACCACTTGCGGGGGTCCGTCCCGCGGAACAGGATGTGCGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM583703             [CAGCGAGCCAAGCTTGCCCGCCGCGACGGGCGGATGGTTCGCAACACTGCACCCCGGCCGACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGGGAGCGCTTTTGGCCGCCGGCGAACCGAACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTTGAGATCAGTATCGCTGAAGGATCGCACCGGACGGTGTTTTTGGTTGCTACTAGCACCATCCCCGTCCTCACCCCCGCCCCCATCGTCGTCAGCGGGTGCGCCCGGTCGGCTAAGGCTGTGCGTTGATGCTCGCAGGCTGGTGCGCTCGTTGCCATCGTGCCGCGATTCAAATCACGAGATAACGGCTACGGGCGCATCGTTGATGACCGGTTCGTACGTTCGCGACGAGTCAATTTCCAGCAGAATAAGCGGCGGATGATCCAGCTGCATCGTGCGGAACTCGTCCGTGAACGTGAGCACGTAGAAGCAGAAGGCGGTCGCGACGATCCACTCCGAGATCGAGCTGGCCACGTGATACTCCCAGCCCCCGTCCGACGGGTACCACTTGCGGGGGTCCGTCCCGCGGAACAGGATGTGCGCGGACGCGTGGGCGGACGCGTGGGCGG]


>consensus_7858#3 CAGCGAGCCAAGCTTGCCCGCCGCGACGGGCGGATGGTTCGCAACACTGCACCCCGGCCG ACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGGGAGCGCTTTTGGCCGCCGG CGAACCGAACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTTGAGATCAGTATCGCTGAAGG ATCGCACCGGACGGTGTTTTTGGTTGCTACTAGCACCATCCCCGTCCTCACCCCCGCCCC CATCGTCGTCAGCGGGTGCGCCCGGTCGGCTAAGGCTGTGCGTTGATGCTCGCAGGCTGG TGCGCTCGTTGCCATCGTGCCGCGATTCAAATCACGAGATAACGGCTACGGGCGCATCGT TGATGACCGGTTCGTACGTTCGCGACGAGTCAATTTCCAGCAGAATAAGCGGCGGATGAT CCAGCTGCATCGTGCGGAACTCGTCCGTGAACGTGAGCACGTAGAAGCAGAAGGCGGTCG CGACGATCCACTCCGAGATCGAGCTGGCCACGTGATACTCCCAGCCCCCGTCCGACGGGT ACCACTTGCGGGGGTCCGTCCCGCGGAACAGGATGTGCGCGGACGCGTGGGCGGACGCGT GGGCGG



consensusID : consensus_7858#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 551
fasta sequence
                              [GCCCCCGAGTTACTCGAACAGTAAAAGGNNCAAAACGCCCGCGGGGTTTGGGCCCGGGCCCCCCTGGCCGATTAGTTCTNGGTACGTTTCGGTTCCGTGTTTAGGAGCCCGTTTTTTTCCCCGTAGTGCAATTGCACAATTACAATTCGCATCGCAATCGACACAACACAAGCAACGCGTACGTGTGAATCCCTGGGCCACCCACACGATAGTTGCAACTAAGCGCGTGGGTTCGGCTCGAGTGGCGATTCAGCNCGAGTGGCCTTGGCAACCCCGGTTTTGGGGCATGGAGGTCAAAGGGGCCCGTTTAACCATGGGTCGCAGCCTTAGGCCAGCCTTAAACTGAACTTCCTCTGGCACCCCCGGGANTTGGAACCACGGGAAAATCCTCCGGCTGTGGTCCAAAAGNCTGGTGGAACTTACGGTAAGGTTTGGAGAACGCCTATGGCNGTATATCCTTGGTGGTTGCTTGCTTTTTANTCCCGCACGCGGTTCANACGAAGCCACAACAAGGTGGACAGACAGGAACGGGTTCCCAAGGTATAGTACTC]

[+] EMBL AL933165             [GCCCCCGAGTTACTCGAACAGTAAAAGGNNCAAAACGCCCGCGGGGTTTGGGCCCGGGCCCCCCTGGCCGATTAGTTCTNGGTACGTTTCGGTTCCGTGTTTAGGAGCCCGTTTTTTTCCCCGTAGTGCAATTGCACAATTACAATTCGCATCGCAATCGACACAACACAAGCAACGCGTACGTGTGAATCCCTGGGCCACCCACACGATAGTTGCAACTAAGCGCGTGGGTTCGGCTCGAGTGGCGATTCAGCNCGAGTGGCCTTGGCAACCCCGGTTTTGGGGCATGGAGGTCAAAGGGGCCCGTTTAACCATGGGTCGCAGCCTTAGGCCAGCCTTAAACTGAACTTCCTCTGGCACCCCCGGGANTTGGAACCACGGGAAAATCCTCCGGCTGTGGTCCAAAAGNCTGGTGGAACTTACGGTAAGGTTTGGAGAACGCCTATGGCNGTATATCCTTGGTGGTTGCTTGCTTTTTANTCCCGCACGCGGTTCANACGAAGCCACAACAAGGTGGACAGACAGGAACGGGTTCCCAAGGTATAGTACTC]


>consensus_7858#4 GCCCCCGAGTTACTCGAACAGTAAAAGGNNCAAAACGCCCGCGGGGTTTGGGCCCGGGCC CCCCTGGCCGATTAGTTCTNGGTACGTTTCGGTTCCGTGTTTAGGAGCCCGTTTTTTTCC CCGTAGTGCAATTGCACAATTACAATTCGCATCGCAATCGACACAACACAAGCAACGCGT ACGTGTGAATCCCTGGGCCACCCACACGATAGTTGCAACTAAGCGCGTGGGTTCGGCTCG AGTGGCGATTCAGCNCGAGTGGCCTTGGCAACCCCGGTTTTGGGGCATGGAGGTCAAAGG GGCCCGTTTAACCATGGGTCGCAGCCTTAGGCCAGCCTTAAACTGAACTTCCTCTGGCAC CCCCGGGANTTGGAACCACGGGAAAATCCTCCGGCTGTGGTCCAAAAGNCTGGTGGAACT TACGGTAAGGTTTGGAGAACGCCTATGGCNGTATATCCTTGGTGGTTGCTTGCTTTTTAN TCCCGCACGCGGTTCANACGAAGCCACAACAAGGTGGACAGACAGGAACGGGTTCCCAAG GTATAGTACTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7858#0      ------------------------------------------------------------
consensus_7858#2      ------------------------------------------------------------
consensus_7858#4      ----------------------GCCCCCGAGTTACTCGAACAGTAAAAGGNNCAAAACGC 38
consensus_7858#3      ----------------------------------------CAGCGAGCCAAGCTTGCCCG 20
consensus_7858#1      TTTTATTTCATCACTAGCGAATTATTACGAGCATTGGTATTTGTTCTCCATTCTGCTATA 60
                                                                                  

consensus_7858#0      ------------CCGGTTATC-CCCGTTCAAGAGCAAAAGCAAAAGACGTC--CAGTT-T 44
consensus_7858#2      -----------------------CCGCCCACGCGTCCGGTTCTGGTACGTTTTCGTTC-G 36
consensus_7858#4      CCGCGGGGTTTGGGCCCGGGC-CCCCCTGGCCGATTAGTTCTNGGTACGTTTCGGTTCCG 97
consensus_7858#3      CCGCGACGGGCGGATGGTTCG-CAACACTGCACCCCGGCCGACGGTGCGCGCTGGGACCG 79
consensus_7858#1      ACACAGCTCATTGTTGTTTCTTCCTTACCCTACCGATCTTGCTCCAACGCTTCTGTACCA 120
                                                                     **           

consensus_7858#0      TGTTGCGGTACC-CCGGTAAATACGGACAACCATCTCTCCTGCCCACTCTGGTGAAGCGT 103
consensus_7858#2      TGTTTAGGAGCC-GTTTTTTTCCCCGTAGTGCAATTGCACAATTACAATTCGCATCGCA- 94
consensus_7858#4      TGTTTAGGAGCCCGTTTTTTTCCCCGTAGTGCAATTGCACAATTACAATTCGCATCGCA- 156
consensus_7858#3      GGGC---GTGCC-CCTTGCCACCGGGGAGCGCTTTTGGCCGCCGGCGAACCGAACCGGC- 134
consensus_7858#1      GACTTCATTTTCAACAAATAACTGCATGCTTCACTCGCTTAAAGATGCTCGATCCTAACT 180
                                 *                   *                            

consensus_7858#0      ATCGA-GCGGAGGGAGCTGCAA-CCATG-TC---GAACCTTTAC----CTAC-------- 145
consensus_7858#2      ATCGACACAACACAAGCAACGC-GTACG-GT---GAATCCCTGC----CCAC-------- 137
consensus_7858#4      ATCGACACAACACAAGCAACGC-GTACGTGT---GAATCCCTGGG---CCAC-------- 201
consensus_7858#3      -TCGGAGCAGCGCCGGCAAAGCAGTTTGAGATCAGTATCGCTGAAGGATCGCA------- 186
consensus_7858#1      GCTGAGCATTCGAGAGCTAAGTGGGATAAGAGAGGTGGTGCTAAGAGACTAAGAGAAATA 240
                         *           **                 *      *                  

consensus_7858#0      ------TTCCAATCTC--CGTGTTTT--TGCTGTTCAATTTCACCTTCATCGGCACGTAC 195
consensus_7858#2      ------CCACACGATG--TGCAACTA--AGC-GCGTGGTTCGGC-----TCGAGGCAT-C 180
consensus_7858#4      ------CCACACGATAGTTGCAACTA--AGC-GCGTGGGT---------TCGGCTCGAGT 243
consensus_7858#3      ------CCGGACGGTGTTTTTGGTTGCTACTAGCACCATCC--CCGTCCTCACCCCCGCC 238
consensus_7858#1      AAACAACCAAATTGCCTTTTTGTTCAAACCTAATATTACTCCTCGCCACACTAAATCCCC 300
                                *                                       *         

consensus_7858#0      ATTGCCGCAG-TACTGCAAGGGCATGTGGTGCCGACGGTACCGT-A-CATCAGCGATGCG 252
consensus_7858#2      ACCGAGGCTG-CACCGTTTGG-CATGAGTCAGCTACAGCACTA--G-CACC--------- 226
consensus_7858#4      GGCGATTCAG-CNC-GAGTGGCCTTG--GCAACCCCGGTTTTGGGG-CATGGAGGTCAAA 298
consensus_7858#3      CCCATCGTCGTCAGCGGGTGCGCCCG-GTCGGCTAAGGCTGTGCGT-TGATGCTCGCAGG 296
consensus_7858#1      AACATGGTGGCCTTCTTCT-TGTAAATATTAAATAAAAGTGTGCATGTAACAACACTAAC 359
                               *                                                  

consensus_7858#0      GCCACCTACT---CACCCGAAAGCTGCGTG-TTTGGGCAGTTCATCAACATCGGCTG-TG 307
consensus_7858#2      -TAACACTCT---TGCCCCGATGACA-GAA-CTCGGGCAAGGGATAGAGTGAAGCTG-CG 279
consensus_7858#4      GGGGCCCGTT---TAACCATGGGTCGCAGC-CTTAGGCCAGCCTTAAA------CTG-AA 347
consensus_7858#3      CTGGTGCGCTCGTTGCCATCGTGCCGCGAT-TCAAATCACGAGATAACGGCTACGGG-CG 354
consensus_7858#1      TTCCTTCCTATAATATCGCTAAATGGGATTGCTAGGATGCAGGGTGACCACTATCGGTCG 419
                                      *                           *           *   

consensus_7858#0      TGCTGCTTGGCATCACAATCTACGTGCGCTACCGGCAGATACAGGAGCTGTCGTT-CCGG 366
consensus_7858#2      TTTTGTGTGTGTTTTCCCCGTTCAAGAGCAAAAGCAAAAAACGTCCAGTTTTGTT-GCGG 338
consensus_7858#4      CTTCCTCTGGCACCCCCGGGANTTGGAACCACGGGAAAAT-CCTCCGGCTGTGGT-CCAA 405
consensus_7858#3      CATCGTTGATGACCGGTTCGTACGTTCGCGACGAGTCAAT--TTCCAGCAGAATAAGCGG 412
consensus_7858#1      CAGGGGGAAGTGGAAAACCGGAACACGACGTACGATCAAATGTAGCTCTGCCGCAGGCTG 479
                                                  *         *                  *  

consensus_7858#0      CACAGTGACGTCCGGCAGGCGCTGGGCCGGTGCAGCGGCATCGGCT---TCTGGATCGGT 423
consensus_7858#2      TAC-------CCCGGTAAATAC-GGACAACCATCTCTCCTGCCCAC---TCTGGTGAAGC 387
consensus_7858#4      AAG-------NCTGGTGGAACTTACGGTAAGGTTTGGAGAACGC-C---TATGGCNGTAT 454
consensus_7858#3      CGGATGAT--CCAGCTGCATCGTGCGGAACTCGTCCGTGAACGTGA---GCACGTAGAA- 466
consensus_7858#1      TCACTAAAGTAAAGGGTAAGGGAGTGCAGTGCTTCCATCAGGGCGACGGGCGGATGGTTC 539
                                   *                                              

consensus_7858#0      ATCGGCAGCTGTCTCGGCATC-AGCATCGTCGGCAACTTC--------CAGGAGAC-GAA 473
consensus_7858#2      GTATCGAGCGGAGGGAGCTGC-AACCATGTCGAACCTTTA--------CCTACTTC-CAA 437
consensus_7858#4      ATCCTTGGT------GGTTGC-TTGCTTTTTANTCCCGCA--------CGCGGTTC-ANA 498
consensus_7858#3      GCAGAAGGCGGTCGCGACG---ATCCACTCCGAGATCGAG--------CTGGCCACGTGA 515
consensus_7858#1      GCAACACTGCACCCGGCCGACGGTGCGCGCTGGGACCGGGGCGTGCCCCTTGCCACCGGG 599
                                                                      *      *    

consensus_7858#0      CGTGCGGATCGTCCACTACGTCGGCGCGTTCCTGAGCTTCGGGCTCGGCACGGTGTACTT 533
consensus_7858#2      TCTCCGTGTT-TTTGCTGT-TCAATTTCACCTTCATCGGCACGTT-AGTATTGCGTATCT 494
consensus_7858#4      CGAAGCCACAACAAGGTGGACAGACAGGAACGGGTTCCCAAGGTATAGTACTC------- 551
consensus_7858#3      TACTCCCAGCCCCCGTCCGACGGGTACCACTTGCGGGGGTCCGTCCCGCGGAACA-GGAT 574
consensus_7858#1      GAGCGCTTTTGGCCGCCGG-CGAACCGTACCGGCTCGGAGCAGCGCCGGCAAAGCAGTTT 658
                                                                *    *            

consensus_7858#0      CTGGATACAGTCGTACATCTCGTACTACATCCAGCCGTACATGGGCACGATGCAGAAGGC 593
consensus_7858#2      CTGCTCGAATGCCCTTTCCGCCTGCTAAATCGCCTTGGGCTTTCAC-CGTTTCAGGTACA 553
consensus_7858#4      ------------------------------------------------------------
consensus_7858#3      GTGCGCGGACGCGTGGGCGGACGCGTGGGCGG---------------------------- 606
consensus_7858#1      GAGATCAGTATCGC-TGCGGACGCGTGGGTC----------------------------- 688
                                                                                  

consensus_7858#0      GAACCTGCGCATGGCCCTGTCG-GTGGTGTGCACCGTGTTCTTCATGATCGTCGCGGTGA 652
consensus_7858#2      TTGCCGCAGTACTGCAAGGGCATGTGGTGCCGACGGTACCGTACATCAGCGATGCGGCCA 613
consensus_7858#4      ------------------------------------------------------------
consensus_7858#3      ------------------------------------------------------------
consensus_7858#1      ------------------------------------------------------------
                                                                                  

consensus_7858#0      CGGGCGTCATCTCGCACATCCTGTTCCGCGGGACGGACCCCCGCAAGTGGTACCCGTCGG 712
consensus_7858#2      CCTAC-TCACCCGAAAGCTGCGTGTTTGGGCAGTTCATCAACATCGGCTGTGTGCTGCGT 672
consensus_7858#4      ------------------------------------------------------------
consensus_7858#3      ------------------------------------------------------------
consensus_7858#1      ------------------------------------------------------------
                                                                                  

consensus_7858#0      ACGGGGGCTGGGAGTATCACGTGGCC 738
consensus_7858#2      AAGTAGAG------------------ 680
consensus_7858#4      --------------------------
consensus_7858#3      --------------------------
consensus_7858#1      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)