Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7882 cluster # 7882       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7882#0 length = 2071 sequences # 8  

consensusID : consensus_7882#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2071
fasta sequence
                              [TGTTCAAGTACACGTTCGGAGTAAACGCCTGGAAGCAATGGGTAGTGACAAAGAATGCCGACCTGGAGAAAAGCTCTATCCGTCGGAAACCGTTCAAATCGGACATCCTGCAGCTGACCGCAGACGAACTTAATTACTCGCTATGCTTGTTCGTAAATGAAGTGAGGAAACCGAACGGCACCGAGTACGCTCCGGATACGATTTACTATCTCGTGCTTGGAATTCAACAATATTTGTTCCAGAACAGAAGGGTTGAAAACATTTTCACCGATCCATACTATGAGCGGTTCACCGATTGTTTGGATGAGGTTGCCAAAAAATTCTCCATGCTTTATAACGACTCTCAGTTTATTGTAACGCGCGTGGAGGAAGAGCATTTATGGGAATGCAAACAGCTTGGAGCACATTCGCCGCATGTATTTCTTAGCACGCTAATGTTTTTCAATACGAAGCATTTCAATTTGGTCTCCGTGGAAGAACACATGGAACTTAGCTTTTCGCATATCATGAAGCACTGGAAAAGGACACCTCAACAAGGGACGAAATCGACGGCGACAAGGAACGTTTTGCTTCGCTTTTATCCGCCGCAGTCGTCGCTCGCAAACAATACGCGAAAGAAAAAGGTCTATGAACAGCAAGAAAATGAAGAAAATCCGCTGAGGTGTCCAGTGAAAC-TTTATGAATTTTATCTATCTAAATGCCCTGAGAGCGTAAAAACACGCAATGACGTATTCTATCTGCAACCGGAACGATCCTGCGTTCCAGACTCTCCGGTGTGGTACTCTACGCAACCGCTAAGTAAAGAGGCGCTCACAAAAATGCTGCATAGAGTAAAGATGGTGAAAGAAATCAACATTGCTTTGCTCACCAGCTAATGAAACGAAGGCTGCACGATAAAGCAGCAGCAGCAGCAGACGCAGCAATCCCTTTCAGATGGAACTGATGCTGAGGGTGTTACTGGTCGATATTTAAATTCTTTGAATTTAACATCCAGCTGTGTACATGGTTCATTGTCTCCAGATACTTCCGGAACTTATGATAGATCACTAGTGATCAACAGAACATTGGTTAACATTGTTCCTAGCAACACAAGCATATTTCCTCCACCACCTCCTGACTACAATTGCTATTACAATGTTCGTGAAAGACATTAATCCCTTCACAGTTTTGCCCATGTCTTACTCGGGCGCGCAAAGTGCTTTCGTAAACTGTTGTTTTACCCGAGTGAGACTCGGGCAGATTTTGCATCGTCCGTTTTTGTTTTCTGTTTTTCACTGCGCTATATTTGTTTGGAACGAAGGTGTCTTGAAAACATATTAGCACATGTGTTGGTATGTAAAATATACCAGTCGATGCAATTAAACCGTTTTTTTATGCATGTTCTTTCCGGTTGTCTCGCGATAGAGGACTACTTTATTTCTGCTGCAAAACTAGCATAGATGCTTACTTTTTAATCTTCATTTAATGTCTAAAATTATTTCTTTGAAAACAATAATAATAATTTTTCCAGCACGTTTAAACCATAAACTGTACAGAAATAAGAACAAATGATGTGACAAATGGCGAGACAGTACTGTGAAAGGGCTAATAAGGAGGTTACTAGTTTATGATGCGATGCGTATGAATCTGTGCCAAGCACGGGTGCTATTCACGGTAAACGGCAAGCACAGCTCACACGGAGTTTGTCATTTCAGTAATGTAGGGTTATCGTTTTGTTGTGTGCCGTTGCCTTCTTGCACCAGATAAGATTGGCCAGCACATATTAGGTACGTAATAGCGAAGAGTTTGTTGAACACGTCTATTTTTCTTGAGTTATTCCTTGTGTGTAAGCAAGCGTGAAGTCCATCTAGCTTTTAAACAGAGACTCTATTACAGTTAGAACATATTACGGTCGACTGTTTGTACATAAGTGTACAATCGAAACGCAAAACAGCCAAGCCGCTTGAAATTCTGGATCAAGGTGTAGAGCATCAAGTGCATTCGAGGGTGTTGATTTTACTTAGGAATCGTAGGAAACATTAGATGCCACATAATTACCAACACTTACGAACATGCNAAGGCTAAGGTATGA]

[+] EMBL CNS08F2H             [TGTTCAAGTACACGTTCGGAGTAAACGCCTGGAAGCAATGGGTAGTGACAAAGAATGCCGACCTGGAGAAAAGCTCTATCCGTCGGAAACCGTTCAAATCGGACATCCTGCAGCTGACCGCAGACGAACTTAATTACTCGCTATGCTTGTTCGTAAATGAAGTGAGGAAACCGAACGGCACCGAGTACGCTCCGGATACGATTTACTATCTCGTGCTTGGAATTCAACAATATTTGTTCCAGAACAGAAGGGTTGAAAACATTTTCACCGATCCATACTATGAGCGGTTCACCGATTGTTTGGATGAGGTTGCCAAAAAATTCTCCATGCTTTATAACGACTCTCAGTTTATTGTAACGCGCGTGGAGGAAGAGCATTTATGGGAATGCAAACAGCTTGGAGCACATTCGCCGCATGTATTTCTTAGCACGCTAATGTTTTTCAATACGAAGCATTTCAATTTGGTCTCCGTGGAAGAACACATGGAACTTAGCTTTTCGCATATCATGAAGCACTGGAAAAGGACACCTCAACAAGGGACGAAATCGACGGCGACAAGGAACGTTTTGCTTCGCTTTTATCCGCCGCAGTCGTCGCTCGCAAACAATACGCGAAAGAAAAAGGTCTATGAACAGCAAGAAAATGAAGAAAATCCGCTGAGGTGTCCAGTGAAACTTTTATGAATTTTATCTATCTAAATGCCCTGAGAGCGTAAAAACACGCAATGACGTATTCTATCTGCAACCGGAACGATCCTGCGTTCCAGACTCTCCGGTGTGGTACTCTACGCAACCGCTAAGTAAAGAGGCGCTCACAAAATTTTTGCATAGAGTAAAGATGGTGAAAGAAATCAACATTGCTTTGCTCACCAGCAAATGAAACGAAGGCTGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08VRT             [     AAGTACACGTTCGGAGTAAACGCCTGGAAGCAATGGGTAGTGACAAAGAATGCCGACCTGGAGAAAAGCTCTATCCGTCGGAAACCGTTCAAATCGGACATCCTGCAGCTGACCGCAGACGAACTTAATTACTCGCTATGCTTGTTCGTAAATGAAGTGAGGAAACCGAACGGCACCGAGTACGCTCCGGATACGATTTACTATCTCGTGCTTGGAATTCAACAATATTTGTTCCAGAACAGAAGGGTTGAAAACATTTTCACCGATCCATACTATGAGCGGTTCACCGATTGTTTGGATGAGGTTGCCAAAAAATTCTCCATGCTTTATAACGACTCTCAGTTTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX607427             [                                                                                                                                                                                                                                                                                                                                                                                GAAGAGCATTTATGGGAATGCAAACAGCTTGGAGCACATTCGCCGCATGTATTGCTTAGCACGCTAATGTTTTTCAATACGAAGCATTTCAATTTGGTCTCCGTGGAAGAACACATGGAACTTAGCTTTTCGCATATCATGAAGCACTGGAAAAGGACACCTCAACAAGGGACGAAATCGACGGCGACAAGGAACGTTTTGCTTCGCTTTTATCCGCCGCAGTCGTCGCTCGCAAACAATACGCGAAAG  AAAGGTCTATGAACAGCAAGAAAATGAAGAAAATCCGCTGAGGTGTCCAGTGAAAC TTTATGAATTTTATCTATCTAAATGCCCTGAGAGCGTAAAAACACGCAATGACGTATTCTATCTGCAACCGGAACGATCCTGCGTTCCAGACTCTCCGGTGTGGTACTCTACGCAACCGCTAAGTAAAGAGGCGCTCACAAAAATGCTGCATAGAGTAAAGATGGTGAAAGAAATCAACATTGCTTTGCTCACCAGCTAATGAAACGAAGGCTGCACGATAAAGCAGCAGCAGCAGCAGACGCAGCAATCCCTTTCAGATGGAACTGATGCTGAGGGTGTTACTGGTCGATATTTAAATTCTTTGAATTTAACATCCAGCTGTGTACATGGTTCATTGTCTCCAGATACTTCCGGAACTTATGATAGATCACTAGTGATCAACAGAACATTGGTTAACATTGTTCCTAGCAACACAAGCATATTTCCTCCACCACCTCCTGACTACAATTGCTATTACAATGTTCGTGAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08F2I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTTATCCCCCGCAGTCGTCGCTCGCAAACAATACGCGAAAGAAAAAGGTCTATGAACAGCAAGAAAATGAAGAAAATCCGCTGAGGTGTCCAGTGAAAC TTTATGAATTTTATCTATCTAAATGCCCTGAGAGCGTAAAAACACGCAATGACGTATTCTATCTGCAACCGGAACGATCCTGCGTTCCAGACTCTCCGGTGTGGTACTCTACGCAACCGCTAAGTAAAGAGGCGCTCACAAAAATGCTGCATAGAGTAAAGATGGTGAAAGAAATCAACATTGCTTTGCTCACCAGCTAATGAAACGAAGGCTGCACGATAAAGCAGCAGCAGCAGCAGACGCAGCAATCCCTTTCAGATGGAACTGATGCTGAGGGTGTTACTGGTCGATATTTAAATTCTTTGAATTTAACATCCAGCTGTGTACATGGTTCATTGTCTCCAGATACTTCCGGAACTTATGATAGATCACTAGTGATCAACAGAACATTGGTTAACATTGTTCCTAGCAACACAAGCATATTTCCTCCACCACCTCCTGACTACAATTGCTATTACAATGTTCGTGAAAGACATTAATCCCTTCACAGTTTTGCCCATGTCTTACTCGGGCGCGCAAAGTGCTTTCGTAAACTGTTGTTTTACCCGAGTGAGACTCGGGCAGATTTTGCATCGTCCGTTTTTGTTTTCTGTTTTTCACTGCGCTATATTTGTTTGGAACGAAGGTGTCTTGAAAACATATTAGCACATGTGTTGGTATGTAAAATATACCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX625305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCAGCAATCCCTTTCAGATGGAACTGATGCTGAGGGTGTTACTGGTCGATATTTAAATTCTTTGAATTTAACATCCAGCTGTGTACATGGTTCATTGTCTCCAGATACTTCCGGAACTTATGATAGATCATTAGTGAGCAACAGAACATTGGTTAACATTGTTCCTAGCAACACAAGCATATTTCCTCCACCACCTCCTGACTACAATTGCTATTACAATGTTCGTGAAAGACATTAATCCCTTCACAGTTTTGCCCATGTCTTACTCGGGCGCGCAAAGTGCTTTCGTACACTGTTGTTTTACCCGAGTGAGACTCGGGCAGATTTTGCATCGTCCGTTTTTGTTTTCTGTTTTTCACTGCGCTATATTTGTTTGGAACGAAGGTGTCTTGAAAACATATTAGCACATGTATTGGTATGTAAAATATACCAGTCGATGCAATTAAACCGTTTTTTTATGCATGTTCTTTCCGGTTGTCTCGCGATAGAGGACTACTTTATTTCTGCTGCAAAACTAGCATAGATGCTTACTTTTTAATCTTCATTTAATGTCTAAAATTATTTCTTTGAAAACAATAATAATAATTTTTCCAGCACGTTTAAACCATAAACTGTACAGAAATAAGAACAAATGATGTGACAAATGGCGAGACAGTACTGTGAAAGGGCTAATAAGGAGGTTACTAGTTTATGATGCGATGCGTATGAATCTGTGCCAAGCACGGGTGCTATTCACGGTAAACGGCAAGCACAGCTCACACGG                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08VRU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGTGCTTTCGTAAACTGTTGTTTTACCCGAGTGAGACTCGGGCAGATTTTGCATCGTCCGTTTTTGTTTTCTGTTTTTCACTGCGCTATATTTGTTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX623377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCATAATTTTCCCAGCACGTTTAAATCATAAACTGTACAGAAATAAGAACAAATGATGTGACAAATGGCGAGACTGTACTGTGAAGGGGCTAATAAGGAGGTTACTAGTTTAT     GATGCGTATGAATCTGTGCCAAGCACGGGTGCTATTCACGGTAAACGGCAAGCACAGCTCACACGGAGTTTGTCATTTCAGTAATGTAGGGTTATCGTTTTGTTGTGTGCCGTTGCCTTCTTGCACCAGATAAGATTGGCCAGCACATATTAGGTACGTAATAGCGAAGAGTTTGTTGAACACGTCTATTTTTCTTGAGTTATTCCTTGTGTGTAAGCAAGCGTGAAGTCCATCTAGCTTTTAAACAGAGACTCTATTACAGTTAGAACATATTACGGTCGACTGTTTGTACATAAGTGTACAATCGAAACGCAAAACAGCCAAGCCGCTTGAAATTCTGGATCAAGGTGTAGAGCATCAAGTGCATTCGAGGGTGTTGATTTTACTTAGGAATCGTAGGAAACATTAGATGCCACATAATTACCAACACTTACGAACATGCNAAGGCTAAGGTATGA]
[+] EMBL AG3UTRA41            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAAACGGCAAGCACAGCTCACACGAAGTTTGTCATTTCAGTAATGTAGGGTTATCGTTTTGTTGTGTGCCGTTGCCTTCTTGCACCAGATAAGATTGGCCAGCACATATTAGGTACGTAATAGCGAA                                                                                                                                                                                                                                                                                                  ]


>consensus_7882#0 TGTTCAAGTACACGTTCGGAGTAAACGCCTGGAAGCAATGGGTAGTGACAAAGAATGCCG ACCTGGAGAAAAGCTCTATCCGTCGGAAACCGTTCAAATCGGACATCCTGCAGCTGACCG CAGACGAACTTAATTACTCGCTATGCTTGTTCGTAAATGAAGTGAGGAAACCGAACGGCA CCGAGTACGCTCCGGATACGATTTACTATCTCGTGCTTGGAATTCAACAATATTTGTTCC AGAACAGAAGGGTTGAAAACATTTTCACCGATCCATACTATGAGCGGTTCACCGATTGTT TGGATGAGGTTGCCAAAAAATTCTCCATGCTTTATAACGACTCTCAGTTTATTGTAACGC GCGTGGAGGAAGAGCATTTATGGGAATGCAAACAGCTTGGAGCACATTCGCCGCATGTAT TTCTTAGCACGCTAATGTTTTTCAATACGAAGCATTTCAATTTGGTCTCCGTGGAAGAAC ACATGGAACTTAGCTTTTCGCATATCATGAAGCACTGGAAAAGGACACCTCAACAAGGGA CGAAATCGACGGCGACAAGGAACGTTTTGCTTCGCTTTTATCCGCCGCAGTCGTCGCTCG CAAACAATACGCGAAAGAAAAAGGTCTATGAACAGCAAGAAAATGAAGAAAATCCGCTGA GGTGTCCAGTGAAACTTTATGAATTTTATCTATCTAAATGCCCTGAGAGCGTAAAAACAC GCAATGACGTATTCTATCTGCAACCGGAACGATCCTGCGTTCCAGACTCTCCGGTGTGGT ACTCTACGCAACCGCTAAGTAAAGAGGCGCTCACAAAAATGCTGCATAGAGTAAAGATGG TGAAAGAAATCAACATTGCTTTGCTCACCAGCTAATGAAACGAAGGCTGCACGATAAAGC AGCAGCAGCAGCAGACGCAGCAATCCCTTTCAGATGGAACTGATGCTGAGGGTGTTACTG GTCGATATTTAAATTCTTTGAATTTAACATCCAGCTGTGTACATGGTTCATTGTCTCCAG ATACTTCCGGAACTTATGATAGATCACTAGTGATCAACAGAACATTGGTTAACATTGTTC CTAGCAACACAAGCATATTTCCTCCACCACCTCCTGACTACAATTGCTATTACAATGTTC GTGAAAGACATTAATCCCTTCACAGTTTTGCCCATGTCTTACTCGGGCGCGCAAAGTGCT TTCGTAAACTGTTGTTTTACCCGAGTGAGACTCGGGCAGATTTTGCATCGTCCGTTTTTG TTTTCTGTTTTTCACTGCGCTATATTTGTTTGGAACGAAGGTGTCTTGAAAACATATTAG CACATGTGTTGGTATGTAAAATATACCAGTCGATGCAATTAAACCGTTTTTTTATGCATG TTCTTTCCGGTTGTCTCGCGATAGAGGACTACTTTATTTCTGCTGCAAAACTAGCATAGA TGCTTACTTTTTAATCTTCATTTAATGTCTAAAATTATTTCTTTGAAAACAATAATAATA ATTTTTCCAGCACGTTTAAACCATAAACTGTACAGAAATAAGAACAAATGATGTGACAAA TGGCGAGACAGTACTGTGAAAGGGCTAATAAGGAGGTTACTAGTTTATGATGCGATGCGT ATGAATCTGTGCCAAGCACGGGTGCTATTCACGGTAAACGGCAAGCACAGCTCACACGGA GTTTGTCATTTCAGTAATGTAGGGTTATCGTTTTGTTGTGTGCCGTTGCCTTCTTGCACC AGATAAGATTGGCCAGCACATATTAGGTACGTAATAGCGAAGAGTTTGTTGAACACGTCT ATTTTTCTTGAGTTATTCCTTGTGTGTAAGCAAGCGTGAAGTCCATCTAGCTTTTAAACA GAGACTCTATTACAGTTAGAACATATTACGGTCGACTGTTTGTACATAAGTGTACAATCG AAACGCAAAACAGCCAAGCCGCTTGAAATTCTGGATCAAGGTGTAGAGCATCAAGTGCAT TCGAGGGTGTTGATTTTACTTAGGAATCGTAGGAAACATTAGATGCCACATAATTACCAA CACTTACGAACATGCNAAGGCTAAGGTATGA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)