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Anopheles gambiae
cluster # 7893 cluster # 7893       Sequences # 8       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7893#0 length = 1149 sequences # 2  
consensus_7893#1 length = 689 sequences # 2  
consensus_7893#2 length = 564 sequences # 1  
consensus_7893#3 length = 483 sequences # 1  
consensus_7893#4 length = 380 sequences # 1  
consensus_7893#5 length = 289 sequences # 1  

consensusID : consensus_7893#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1149
fasta sequence
                              [CCGTGGCATTTAAAGCGTTCGAAAGCGGTGCAACTACAGGGGGGAGTGAAAAGAGACACACTAACAACCCCCCACAAACTCGCCATGCATCCAAGTAATCGATGGATCCGTGTCCATTTGTGCGTTCTCTCTCTCTCTGTAGCGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAAAAACCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCAGCCGGGAGGGCGACAACTACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGAAACCACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGCCGGCTGTTCCGGTGCGATGCCGCGTTCGAGAACGAGATCACCGCGTACGCGAGCATCGTCCCGGTGCTGCAGCGGATATCGCCGTACGATCTGCCGTACCCGAAGTGCGTGACGGCCGGCAGCGACGAGCACGGCGATCGGATCGTGCTGGAGGATCTGACCACGAGCGGGTACGCCATGCTCGATCGGCGGGTTGGGCTGAGCTACGAGCACTGCATTGCGGTGATGAAGGAGCTGGCGAAACTGCATGCCGTCTCGCTCGCGATGAAGCACGCGCACCCGCACGAGTACGCCGACGTCTGCTCGAAGATACGCGAGATCGTGTACTGTCCGGAGGCGGCCGAGTTCTACACACATTCCCTACGAGTCGTCGCTGCGCGGCGCCC]

[+] EMBL BM642826             [CCGTGGCATTTAAAGCGTTCGAAAGCGGTGCAACTACAGGGGGGAGTGAAAAGAGACACACTAACAACCCCCCACAAACTCGCCATGCATCCAAGTAATCGATGGATCCGTGTCCATTTGTGCGTTCTCTCTCTCTCTGTAGCGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAAAAACCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCAGCCGGGAGGGCGACAACTACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM636353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgCGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCAGCCGGGAGGGCGACAACTACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGAAACCACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGCCGGCTGTTCCGGTGCGATGCCGCGTTCGAGAACGAGATCACCGCGTACGCGAGCATCGTCCCGGTGCTGCAGCGGATATCGCCGTACGATCTGCCGTACCCGAAGTGCGTGACGGCCGGCAGCGACGAGCACGGCGATCGGATCGTGCTGGAGGATCTGACCACGAGCGGGTACGCCATGCTCGATCGGCGGGTTGGGCTGAGCTACGAGCACTGCATTGCGGTGATGAAGGAGCTGGCGAAACTGCATGCCGTCTCGCTCGCGATGAAGCACGCGCACCCGCACGAGTACGCCGACGTCTGCTCGAAGATACGCGAGATCGTGTACTGTCCGGAGGCGGCCGAGTTCTACACACATTCCCTACGAGTCGTCGCTGCGCGGCGCCC]


>consensus_7893#0 CCGTGGCATTTAAAGCGTTCGAAAGCGGTGCAACTACAGGGGGGAGTGAAAAGAGACACA CTAACAACCCCCCACAAACTCGCCATGCATCCAAGTAATCGATGGATCCGTGTCCATTTG TGCGTTCTCTCTCTCTCTGTAGCGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCC AAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTG ATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTG GCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAGCAAAAGCGAT TCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAAAAACCCGCTC TCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGA AGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGA CACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGCAGACGCTGTCGGT CGACCTGGTCGACTGCGGGCCGGGCAGCCGGGAGGGCGACAACTACATGTCGATCATCAA GCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGAAACCACGTGTTTACAAT TTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGCCGGCTGTTCCGGTGCGA TGCCGCGTTCGAGAACGAGATCACCGCGTACGCGAGCATCGTCCCGGTGCTGCAGCGGAT ATCGCCGTACGATCTGCCGTACCCGAAGTGCGTGACGGCCGGCAGCGACGAGCACGGCGA TCGGATCGTGCTGGAGGATCTGACCACGAGCGGGTACGCCATGCTCGATCGGCGGGTTGG GCTGAGCTACGAGCACTGCATTGCGGTGATGAAGGAGCTGGCGAAACTGCATGCCGTCTC GCTCGCGATGAAGCACGCGCACCCGCACGAGTACGCCGACGTCTGCTCGAAGATACGCGA GATCGTGTACTGTCCGGAGGCGGCCGAGTTCTACACACATTCCCTACGAGTCGTCGCTGC GCGGCGCCC



consensusID : consensus_7893#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 689
fasta sequence
                              [CCGCCCACGCGTCCGGTGCCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACA---AAAAA---CCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCATCCGGGAGGGCGACAACTACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGAAACCACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGCCGGCTGTTCCGGTGCGATGCCGCGTTCGAGAAC]

[+] EMBL BM615554             [CCGCCCACGCGTCCGGTGCCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACA   AAAAA   CCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCATCCGGGAGGGCGACAACTACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGAAACCACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGCCGGCTGTTCCGGTGCGATGCCGCGTTCGAGAAC]
[+] EMBL BM641793             [                  CCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTGCA  GTGTGTGTGTGTGCGTGTGAGTTAATTTTTTGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGAGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAACAAAAAGCCCCCGTTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGA                                                                                                                                                                                                                                         ]


>consensus_7893#1 CCGCCCACGCGTCCGGTGCCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGC AGCAATAACCGCCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATT TTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAA ATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAA AAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAAC AAAAAACCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCA GGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGA TCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTGTGGC AGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCATCCGGGAGGGCGACAACTACA TGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGAAACC ACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGCCGGC TGTTCCGGTGCGATGCCGCGTTCGAGAAC



consensusID : consensus_7893#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence
                              [CCGGTAACAGTGGTTCTTATCTGGGTGCGGCATCACACGGGACTCTTCCATCCCCTGCTACTAACAGTGTTTACTACTACTCGGGCTGGGCCCTGAAGAAGAAATCGGAAATTGGAAATTCATCTTTTTGTCGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTGCAGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGAGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAACAAAAAGCCCCCGTTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAG]

[+] EMBL BM620119             [CCGGTAACAGTGGTTCTTATCTGGGTGCGGCATCACACGGGACTCTTCCATCCCCTGCTACTAACAGTGTTTACTACTACTCGGGCTGGGCCCTGAAGAAGAAATCGGAAATTGGAAATTCATCTTTTTGTCGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTGCAGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGAGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAACAAAAAGCCCCCGTTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAG]


>consensus_7893#2 CCGGTAACAGTGGTTCTTATCTGGGTGCGGCATCACACGGGACTCTTCCATCCCCTGCTA CTAACAGTGTTTACTACTACTCGGGCTGGGCCCTGAAGAAGAAATCGGAAATTGGAAATT CATCTTTTTGTCGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACA CACTGCAGTGTGTGTGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTG TACCTGTGAGTGAGTGAAGAGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACAC AAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAAGCGATTCCGGTTGAAGCG AACTTGCCCCAAAACAAACAGAAAACAAACGAACAAACAAAAAGCCCCCGTTCTCCCCCC TATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCGTCAGGATGAAGCAAGAAGTGGCG GTCGGCATGTACGTGGACGAGGATCGGGACGTGTACATGATCGAGCGGAAGGACACGATC GTCGACATCATCCGGATGCAGCAG



consensusID : consensus_7893#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGCTCGATCGGCGGGTTGGGCTGAGCTACGAGCACTGCATTGCGGTGATGAACGAGCTGGCGAAACTGCATGCCGTCTCGCTCGCGATGAAGCACGCGCACCCTCACGAGTACTCCGACGTCTGCTCGAATATACGCGAGATCGTGTACTGTCCGGAGGCGGCCGAGTTCTACACACATTCCCTCTAGTCGTCGCTGCGCGGCGCCCTGGACAGCCTGCGGTACAGCAACGGCGATCAGGACGAGCTGGACTGCCCGATCCGGGCGGTGGAGGGGCTGACCGGCCGGCTGTACCGCATCATGTCCGCGCTGGTGTGCGACGGCATGGACGATGGCTGGCGCGTCATCTGCCACGGCGACACGTGGGTGAACAATCTGATGTTTAGCGCGGACCGGCAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGACATACTG]

[+] EMBL BM629581             [CCGCGGACGCGTGGGCGGACGCGTGGGCTCGATCGGCGGGTTGGGCTGAGCTACGAGCACTGCATTGCGGTGATGAACGAGCTGGCGAAACTGCATGCCGTCTCGCTCGCGATGAAGCACGCGCACCCTCACGAGTACTCCGACGTCTGCTCGAATATACGCGAGATCGTGTACTGTCCGGAGGCGGCCGAGTTCTACACACATTCCCTCTAGTCGTCGCTGCGCGGCGCCCTGGACAGCCTGCGGTACAGCAACGGCGATCAGGACGAGCTGGACTGCCCGATCCGGGCGGTGGAGGGGCTGACCGGCCGGCTGTACCGCATCATGTCCGCGCTGGTGTGCGACGGCATGGACGATGGCTGGCGCGTCATCTGCCACGGCGACACGTGGGTGAACAATCTGATGTTTAGCGCGGACCGGCAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGACATACTG]


>consensus_7893#3 CCGCGGACGCGTGGGCGGACGCGTGGGCTCGATCGGCGGGTTGGGCTGAGCTACGAGCAC TGCATTGCGGTGATGAACGAGCTGGCGAAACTGCATGCCGTCTCGCTCGCGATGAAGCAC GCGCACCCTCACGAGTACTCCGACGTCTGCTCGAATATACGCGAGATCGTGTACTGTCCG GAGGCGGCCGAGTTCTACACACATTCCCTCTAGTCGTCGCTGCGCGGCGCCCTGGACAGC CTGCGGTACAGCAACGGCGATCAGGACGAGCTGGACTGCCCGATCCGGGCGGTGGAGGGG CTGACCGGCCGGCTGTACCGCATCATGTCCGCGCTGGTGTGCGACGGCATGGACGATGGC TGGCGCGTCATCTGCCACGGCGACACGTGGGTGAACAATCTGATGTTTAGCGCGGACCGG CAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGACATA CTG



consensusID : consensus_7893#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 380
fasta sequence
                              [AATTCCCCGAGGTTTTGCACGGCGACACGGTGGGTGAACAATCTGATGTTTAGCGCGGACCGGCAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGACATACTGCACCTGCTGTACACCAGCACGGAGCACTCGATGCGCCGGCAGTACGTGCCCGAGCTGCTGCTGCAGTACCGCCAGTCGCTGCTCGCGGCGCTGGGGGAGCATTTCTGCGCGTGCGAAGAGCCGGCGCGGCGCGCGCTGCTGCGCCGCTACGCGGACCAGTTTTCGTACGCCCGGCTGCGGGCCGAGTACGATCGCTGCCTGCCGTACGGGCTCGGCATCGCGATGTGGCTGCTGCCGGCCGTCACCTTCAACCC]

[+] EMBL AL694184             [AATTCCCCGAGGTTTTGCACGGCGACACGGTGGGTGAACAATCTGATGTTTAGCGCGGACCGGCAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGACATACTGCACCTGCTGTACACCAGCACGGAGCACTCGATGCGCCGGCAGTACGTGCCCGAGCTGCTGCTGCAGTACCGCCAGTCGCTGCTCGCGGCGCTGGGGGAGCATTTCTGCGCGTGCGAAGAGCCGGCGCGGCGCGCGCTGCTGCGCCGCTACGCGGACCAGTTTTCGTACGCCCGGCTGCGGGCCGAGTACGATCGCTGCCTGCCGTACGGGCTCGGCATCGCGATGTGGCTGCTGCCGGCCGTCACCTTCAACCC]


>consensus_7893#4 AATTCCCCGAGGTTTTGCACGGCGACACGGTGGGTGAACAATCTGATGTTTAGCGCGGAC CGGCAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGAC ATACTGCACCTGCTGTACACCAGCACGGAGCACTCGATGCGCCGGCAGTACGTGCCCGAG CTGCTGCTGCAGTACCGCCAGTCGCTGCTCGCGGCGCTGGGGGAGCATTTCTGCGCGTGC GAAGAGCCGGCGCGGCGCGCGCTGCTGCGCCGCTACGCGGACCAGTTTTCGTACGCCCGG CTGCGGGCCGAGTACGATCGCTGCCTGCCGTACGGGCTCGGCATCGCGATGTGGCTGCTG CCGGCCGTCACCTTCAACCC



consensusID : consensus_7893#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 289
fasta sequence
                              [CCGGTTTGCTAGTGCCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTACAGTGTGCGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAAGCGATTCCGGTTGGAGCAAACTTGCCCCAAAACCAACAGAAAACAAACG]

[+] EMBL BM626693             [CCGGTTTGCTAGTGCCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGCAGCAATAACCGCCAAAATACTACACACTACAGTGTGCGTGTGCGTGTGAGTTAATTTTGCGTAATTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAAGCGATTCCGGTTGGAGCAAACTTGCCCCAAAACCAACAGAAAACAAACG]


>consensus_7893#5 CCGGTTTGCTAGTGCCGGACGGGTGTAACCACGGTGAGTGATTGAGCAGCAGCAGCAGCA ATAACCGCCAAAATACTACACACTACAGTGTGCGTGTGCGTGTGAGTTAATTTTGCGTAA TTTTGATGCGTGTGCGTGTACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATAGGCAA GTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAGCAAAA GCGATTCCGGTTGGAGCAAACTTGCCCCAAAACCAACAGAAAACAAACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7893#2      --------------CCGGTAACAGTGGTTCTTATCTGGGTGCGGCATCACACGGGACTCT 46
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ------------------------------------------------------------
consensus_7893#0      CCGTGGCATTTAAAGCGTTCGAAAGCGGTGCAACTACAGGGGGGAGTGAAAAGAGACACA 60
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      TCCATCCCCTGCTACTAACAGTGTTTACTACTACTCGGGCTGGGCCCTGAAGAAGAAATC 106
consensus_7893#5      -----------------------------------------------------CCGGTTT 7
consensus_7893#1      ----------------------------------------------CCGCCCACGCGTCC 14
consensus_7893#0      CTAACAACCCCCCACAAAC-----TCGCCATGCATCCAAGTAATCGATGGATCCGTGTCC 115
consensus_7893#3      --------------------------------------------CCGCGGACGCGTGGGC 16
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      GGAAATTGGAAATTCATCTTTTTGT--CGGTGAGTGATTGAGCAGCA-GCAGCAGCAATA 163
consensus_7893#5      GCTAGTGCCGGACGGGTGTAACCA---CGGTGAGTGATTGAGCAGCA-GCAGCAGCAATA 63
consensus_7893#1      G---GTGCCGGACGGGTGTAACCA---CGGTGAGTGATTGAGCAGCA-GCAGCAGCAATA 67
consensus_7893#0      ATTTGTGCGTTCTCTCTCTCTCTGTAGCGGTGAGTGATTGAGCAGCA-GCAGCAGCAATA 174
consensus_7893#3      GGACGCGTGGGCTCGATCGGCGGGTTGGGCTGAGCTAC-GAGCACTGCATTGCGGTGATG 75
consensus_7893#4      -------------------------------------------AATTCCCCGAGGTTTTG 17
                                                                 *       *  *   * 

consensus_7893#2      ACCG---CCAAAATACTACACACTGCAGTGTGTGTGTGTG--CGTGTGAGTTAATTTTGC 218
consensus_7893#5      ACCG---CCAAAATACTACACACTACAGTGTGCGTGTG----CGTGTGAGTTAATTTTGC 116
consensus_7893#1      ACCG---CCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGC 124
consensus_7893#0      ACCG---CCAAAATACTACACACTACAGTGTGTGTGTGTGTGCGTGTGAGTTAATTTTGC 231
consensus_7893#3      AACGAGCTGGCGAAACTGCATGCCGTCTCGCTCGCGATGAAGCACGCGCACCC-TCACGA 134
consensus_7893#4      CACG-----GCGACACGGTGGGTGAACAATCTGATGTTTA---GCGCGGACCGGCAGCAC 69
                        **        * **                   *         * *            

consensus_7893#2      GTAATTTTGATGCGTGTGCGTG-TACCTGTGAGTGAGTGAAGAGTGTGGTAAGCGAAATA 277
consensus_7893#5      GTAATTTTGATGCGTGTGCGTG-TACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATA 175
consensus_7893#1      GTAATTTTGATGCGTGTGCGTG-TACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATA 183
consensus_7893#0      GTAATTTTGATGCGTGTGCGTG-TACCTGTGAGTGAGTGAAGTGTGTGGTAAGCGAAATA 290
consensus_7893#3      GTA-CTCCGACGTCTGCTCGAA-TATACGCGAGATCGTGTACTGTCCGG-AGGCGGCCGA 191
consensus_7893#4      GTC-------CGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTGCTGGACAT 122
                      **         *  **  **   *      **     ** *       *     *     

consensus_7893#2      GGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAG 337
consensus_7893#5      GGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAACAGCAAAAG 235
consensus_7893#1      GGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAG 243
consensus_7893#0      GGCAAGTGTGGCTTTATAAACACAAACACACCCACTCGTAAAGAACAGCAGAAGCAAAAG 350
consensus_7893#3      GTTCTACACACATTCCCTCTAGTCGTCGCTGCGCGGCGCCCTGGACAGCCTGCGGTACAG 251
consensus_7893#4      ACTGCACCTGC-TGTACACCAGCACGGAGCACTCGATGCGCCGG-CAGTACGTGCCCGAG 180
                                  *                  *     *    *  ***     *    **

consensus_7893#2      CAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAA 397
consensus_7893#5      CAAAAGCGATTCCGGTTGGAGCAAACTTGCCCCAAAACCAACAGAAAACAAACG------ 289
consensus_7893#1      CAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAA 303
consensus_7893#0      CAAAAGCGATTCCGGTTGAAGCGAACTTGCCCCAAAACAAACAGAAAACAAACGAACAAA 410
consensus_7893#3      CAACGGCGAT-CAGGACGAGCTGGACT--GCCCGATCCGGGCGGTGGAGGGGCTGACCGG 308
consensus_7893#4      CTGCTGC--TGCAGTACC-GCCAGTCG----CTGCTCGCGGCGCTGGGGGAGCATTTCTG 233
                      *    **  * * *           *     *         *          *       

consensus_7893#2      CAAAAAGCCCCCGTTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCG 457
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      AAA------CCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCG 357
consensus_7893#0      AAA------CCCGCTCTCCCCCCTATCGTCGCCGCCTTCACATGCAAGCCCGCACAGCCG 464
consensus_7893#3      ---------CCGGCTGTACCGCATCATGTCCGCGCTGGTGTGCGACGGCATGGACGATGG 359
consensus_7893#4      CGCG-----TGCGAAGAGCCGGCGCG-GCGCGCGCTGCTGCGCCGCTACGCGGACCAGTT 287
                                                                                  

consensus_7893#2      TCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTA-C 516
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      TCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTA-C 416
consensus_7893#0      TCAGGATGAAGCAAGAAGTGGCGGTCGGCATGTACGTGGACGAGGATCGGGACGTGTA-C 523
consensus_7893#3      CTGGCGCGTCATCTGCCACGGCGA--------CACGTGGGTGAACAATCTGATGTTTAGC 411
consensus_7893#4      TTCGTACGCC--CGGCTGCGGGC---------CGAGTACGATCGCTGCCTGCCGTACG-- 334
                                                                                  

consensus_7893#2      ATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAG------------ 564
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTG 476
consensus_7893#0      ATGATCGAGCGGAAGGACACGATCGTCGACATCATCCGGATGCAGCAGAAGGCGGGCCTG 583
consensus_7893#3      GCGGACCGGCAGCACGTCCGGCTGATCGACCTGCAGACGATGCGCTGCACCACCCCGGTG 471
consensus_7893#4      --GGCTCGGCATCGCGATG---TGGCTG--CTGCCGGCCGTCACCTTCAACCC------- 380
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      TGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCATCCGGGAGGGCGACAAC 536
consensus_7893#0      TGGCAGACGCTGTCGGTCGACCTGGTCGACTGCGGGCCGGGCAGCCGGGAGGGCGACAAC 643
consensus_7893#3      CTGGACATACTG------------------------------------------------ 483
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      TACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGA 596
consensus_7893#0      TACATGTCGATCATCAAGCGGGTAAAGGCCCACTGTAAGGCGAAATCGGTCGACGGGCGA 703
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      AACCACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGC 656
consensus_7893#0      AACCACGTGTTTACAATTTCGCTGATTTTTAAGCGTCAAATCACCAACCCGAACCGGCGC 763
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      CGGCTGTTCCGGTGCGATGCCGCGTTCGAGAAC--------------------------- 689
consensus_7893#0      CGGCTGTTCCGGTGCGATGCCGCGTTCGAGAACGAGATCACCGCGTACGCGAGCATCGTC 823
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ------------------------------------------------------------
consensus_7893#0      CCGGTGCTGCAGCGGATATCGCCGTACGATCTGCCGTACCCGAAGTGCGTGACGGCCGGC 883
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ------------------------------------------------------------
consensus_7893#0      AGCGACGAGCACGGCGATCGGATCGTGCTGGAGGATCTGACCACGAGCGGGTACGCCATG 943
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ------------------------------------------------------------
consensus_7893#0      CTCGATCGGCGGGTTGGGCTGAGCTACGAGCACTGCATTGCGGTGATGAAGGAGCTGGCG 1003
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ------------------------------------------------------------
consensus_7893#0      AAACTGCATGCCGTCTCGCTCGCGATGAAGCACGCGCACCCGCACGAGTACGCCGACGTC 1063
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      ------------------------------------------------------------
consensus_7893#5      ------------------------------------------------------------
consensus_7893#1      ------------------------------------------------------------
consensus_7893#0      TGCTCGAAGATACGCGAGATCGTGTACTGTCCGGAGGCGGCCGAGTTCTACACACATTCC 1123
consensus_7893#3      ------------------------------------------------------------
consensus_7893#4      ------------------------------------------------------------
                                                                                  

consensus_7893#2      --------------------------
consensus_7893#5      --------------------------
consensus_7893#1      --------------------------
consensus_7893#0      CTACGAGTCGTCGCTGCGCGGCGCCC 1149
consensus_7893#3      --------------------------
consensus_7893#4      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)