Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7894 cluster # 7894       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7894#0 length = 1207 sequences # 8  

consensusID : consensus_7894#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1207
fasta sequence
                              [GAAGCTTAGCTTATTTACAGGTAATTTGCCGCCAGTACGCCTCCGTAGAAATTGTTCAAAACAGTGTTTAATTACTTCA-AAGAATACATATTCCGTAAGCGTTAATGTACACATTCCCCGTCGCTCATTAGTAACAATGAGAAATTGCTACGTATATTCGTGCGATCGGCGTCATAAGGATGACCCAAGGCGGGCAATGTTTAACGTACCAAAGGACCCGGAAAAGTTTGAGGAATGGCGCGCGGCACTACCGATGCATCGACCCTTGCGGCCACACGACCGGGTGTGTGAGAAGCACTTCAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCAGGAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT-GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG-CCGGATGATGAAGAAACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGACGTAGAAACAGTTCAGCAAATCTTAGAAAGTTGTATCAAAGATTGATCTCTCAAAGCAACCGGCTACGTACAATAAAAATAAACCAAAAAAAAAAAACACTACCGTATCCGACGGCTGTTTTGAACTAATAAGCAAGTGTAGTTGAAAAATGAGCATCGTTCGTTCATTTGAATAAATATAGCAAAG]

[+] EMBL CNS09CSY             [GAAGCTTAGCTTATTTACAGGTAATTTGCCGCCAGTACGCCTCCGTAGAAATTGTTCAAAACAGTGTTTAATTACTTCA AAGAATACATATTCCGTAAGCGTTAATGTACACATTCCCCGTCGCTCATTAGTAACAATGAGAAATTGCTACGTATATTCGTGCGATCGGCGTCATAAGGATGACCCAAGGCGGGCAATGTTTAACGTACCAAAGGACCCGGAAAAGTTTGAGGAATGGCGCGCGGCACTACCGATGCATCGACCCTTGCGGCCACACGACCGGGTGTGTGAGAAGCACTTCAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCA GAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAGGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGC                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09CEJ             [                         TTGCCGCCAGTACGCCTCCGTAGAAATTGTTCAAAACAGTGTTTAATTACTTCAGAAGAATACATATTCCGTAAGCGTTAATGTACACATTCCCCGTCGCTCATTAGTAACAATGAGAAATTGCTACGTATATTCGTGCGATCGGCGTCATAAGGATGACCCAAGGCGGGCAATGTTTAACGTACCAAAGGACCCGGAAAAGTTTGAGGAATGGCGCGCGGCACTACCGATGCATCGACCCTTGCGGCCACACGACCGGGTGTGTGAGAAGCACTTCAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCA GAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCGCCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT GGGGTGTGCACCGGGAACCGAACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGGCCCGGATGATGAAGAAACATCAGTTCGATT                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08U18             [                               gCAGTACGCCTCCGTAGAAATTGTTCAAAACAGTGTTTAATTACTTCA AAGAATACATATTCCGTAAGCGTTAATGTACACATTCCCCGTCGCTCATTAGTAACAATGAGAAATTGCTACGTATATTCGTGCGATCGGCGTCATAAGGATGACCCAAGGCGGGCAATGTTTAACGTACCAAAGGACCCGGAAAAGTTTGAGGAATGGCGCGCGGCACTACCGATGCATCGACCCTTGCGGCCACACGACCGGGTGTGTGAGAAGCACTTCAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCAGGAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG CCGGATGATGAAGAAACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGACGTA                                                                                                                                                                                       ]
[+] EMBL CNS08SIM             [                                    ACGCCTCCGTAGAAATTGTTCAAAACAGTGTTTAATTACTTTA AAGAATACATATTCCGTAAGCGTTAATGTACACATTCCCCGTCGCTCATTAGTAACAATGAGAAATTGCTACGTATATTCGTGCGATCGGCGTCATAAGGATGACCCAAGGCGGGCAATGTTTAACGTACCAAAGGACCCGGAAAAGTTTGAGGAATGGCGCGCGGCACTACCGATGCATCGACCCTTGCGGCCACACGACCGGGTGTGTGAGAAGCACTTCAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCA GAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTTGGGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG CCGGATGATGAAG AACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTC                                                                                                                                                                                                 ]
[-] EMBL CNS09CSZ             [                                                                                                                                                                                                                                                                    CGACCCTTGCGGCCACACGACCGGGTGTGTGAAAAGCACTTCAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCAGGAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAGGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG CCGGATGATGAAGAAACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGACGTAGAAACAGTTCAGCAAATCTTAGAAAGTTGTATCAAAGATTGATCTCTCAAAGCAACCGGCTACGTACAATAAAAATAAA  AAAAAAAAAAA                                                                                           ]
[-] EMBL CNS08SIN             [                                                                                                                                                                                                                                                                                                                                CGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCTGATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCAGGAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGTTTT GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG CCGGATGATGAAGAAACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGACGTAGAAACAGTTCAGCAAATCTTAGAAAGTTGTATCAAAGATTGTTCTCTCAAAGCAACCGGCTACGTACAATAAAAATAAACCAAAAAAAAAAAACACTACCGTATCCGACGGCTGTTTTGAACTAATAAGCAAGTGTAGTTGAAAAATGAGCATCGTTCGTTCATTTGAATAAATATA      ]
[-] EMBL CNS08U19             [                                                                                                                                                                                                                                                                                                                                                                                          TCCTGCTGCCGGACGCAGTTCCCTGTTTTTTCGACATCGTGGAAAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACCACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTAACGGCACCAGCCCGCAGGAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCACCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG CCGGATGATGAAGAAACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGACGTAGAAACAGTTCAGCAAATCTTAGAAAGTTGTATCAAAGATTGATCTCTCAAAGCAACCGGCTACGTACAATAAAAATAAACCAAAAAAAAAAAACACTACCGTATCCCACGGCTTTTTTGAACTAATAAGCAAGTGTAGTTGAAAAATGAGCATCGTTCGTTCATTTGAATAAATATAGCAAAG]
[-] EMBL CNS09CEK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAGGGTGGATTGATGGTGGTCGTTGACGGCACCAGCCCGCAGGAGGACGAACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGGAGCGATCCAACAGCCAGCGCCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGAACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGTTGAGCTACCGTGTACGCTTT GGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATTTAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCTTTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAGGGACATTTCCACGAAGCTGGTACCCAGG CCGGATGATGAAGAAACATCAGTTCGATTTAATGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGACGTAGAAACAGTTCAGCAAATCTTAGAAAGTTGTATCAAAGATTGTTCTCTCAAAGCAACCGGCTACGTACAATAAAAATAAACCAAAAAAAA                                                                                              ]


>consensus_7894#0 GAAGCTTAGCTTATTTACAGGTAATTTGCCGCCAGTACGCCTCCGTAGAAATTGTTCAAA ACAGTGTTTAATTACTTCAAAGAATACATATTCCGTAAGCGTTAATGTACACATTCCCCG TCGCTCATTAGTAACAATGAGAAATTGCTACGTATATTCGTGCGATCGGCGTCATAAGGA TGACCCAAGGCGGGCAATGTTTAACGTACCAAAGGACCCGGAAAAGTTTGAGGAATGGCG CGCGGCACTACCGATGCATCGACCCTTGCGGCCACACGACCGGGTGTGTGAGAAGCACTT CAAGCCGGAAGACATACAGCGAGACTGGACGTACCACATACGGGGCGAAACGCGGAAGCT GATGCGAGCGAAACCGGTCCTGCTGCCGGACGCAGTTCCCTGTGTTTTCGACATCGTGGA AAAGGTCGACAATAAAGAGAACAGAGGTCGACGGAAAACAGCCGAACCAGCGAAAGAACC ACCGTCGGAAGAAGGTGGCTTGCTGGTGGTCGTTGACGGCACCAGCCCGCAGGAGGACGA ACCAATTGGCGTGGAGCAAACGTCCATGGTTGTTTTGTTTAAGGACGGATCTTTGGATGG AGCGATCCAACAGCCAGCACCCCTCGGTGAAGGTATGGAAGAGGCACTGGTAGAAGCCGA ACCGGATGCCGCGACAAAAGAGTCCATCTTCGAGGAATTGTACGACAACATCTATGAGGT TGAGCTACCGTGTACGCTTTGGGGTGTGCACCGGGAACCGGACAGGAAGTTTGCCGCATT TAGTCGCTTCGAATGGTGCCCGAGCGATGACGGGGAAGAGGCAGTTAAATCGGTTTCGCT TTTGGTCGACTGTTCCTTGGCATGCCGGGCCTGGTACCGTGGGCGGCTCGTGCTCGAAAG GGACATTTCCACGAAGCTGGTACCCAGGCCGGATGATGAAGAAACATCAGTTCGATTTAA TGTTTTAATAGAATTACTTGACCGGCTAGAACAAGCTGCCACCGAGAAAGGTTCAGTGGA CGTAGAAACAGTTCAGCAAATCTTAGAAAGTTGTATCAAAGATTGATCTCTCAAAGCAAC CGGCTACGTACAATAAAAATAAACCAAAAAAAAAAAACACTACCGTATCCGACGGCTGTT TTGAACTAATAAGCAAGTGTAGTTGAAAAATGAGCATCGTTCGTTCATTTGAATAAATAT AGCAAAG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)