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Anopheles gambiae
cluster # 7896 cluster # 7896       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7896#0 length = 1621 sequences # 4  
consensus_7896#1 length = 832 sequences # 1  
consensus_7896#2 length = 651 sequences # 1  
consensus_7896#3 length = 486 sequences # 2  

consensusID : consensus_7896#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1621
fasta sequence
                              [ATNGCCCCGAGGCTTACACAGATCACCGAACCGGTAGCCCTGTAGAACCGGACGCAGCAACAGCACCAACAGAAACGACTACAGAAACAGAGCCAGCAGCCGCGGCGTCTTCGGAGAAAACACAAGAAAAGGTCACAACAAATGATGCCGACGCGGAAAAGATGGACGTCGATTTGGACCAGTTGCCCACAGCCAGCACGGTGGAGCC-GCCGGTTGATACAGCGGTTGCCGAAGCAGAAAAGCAAGCCACCGTTGAGCAATCCGACATTGCAATGGAG-GAAACTATGAGCGATAATCAAACAACAGAGCAG-GCGGAAAGCATCACCACCACAGCC-GTCCCAGCAGAGGAAGCACCGAAGGAA-GC-GGAC-GGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGC-TGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCAAGCTCGAGGGACTTTGC-ATC-GAGCGAGACGATTTTA-TCGAGGCGCTGAAAA-CGGTACAACCGTCGGCGAAG-CGGGAAGGCTTCATCACCGTGCCGGACGTGACG-TGG-AACGATATCGGTTCACTCGGCGA-CATACGGG-AGGAGCTGAAGCTAGC-GATACTGG-CGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACT-GGGACTGACGGC-TCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGGCAGTGCTTTCAGCGTGCCCGCAATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCGGAGGGCAGTGCGGGGACGCGCGTCGTTAACCAGCTGCTGACGGAGATGGACGGCATCGAGGAGCGCAAGGGCGTGTTCCTGATGGCGGCCACCAATCGGCCCGATATCGTCGATCCGGCCGTGATGCGTCCCGGTCGGCTGGACAAGATTCTGTACGTCGGACTGCCGGCCAAGGAGGATCGGGGTGGATATATTGCGTGCGCTGACGAAGAATCGCACCCAGCCACGGCTCGCGGACGACGTGGAGCTGGAGAAGGTGGCTGAACTTACCGAAGGCTACACTGGGGCCGATTTGGCTGGGCTGGTGCGGCAAGCGTCGCTGCAAACGCTTAAAGATTCTATTGTGGCGAGCAGCTTGCAGGAGGAGACGGCTGGAGGGGAAACAACTGCCGAGGATGAGCTGTCGTTGATGGTTCGGTTCGAACACTTCACCCAAGCGATACGCAACATCAAACCATCGGTTAATGCTGAGGACAAAAAGCATTACGAAAAGTTACGCCTCAAGTATGGCGTTAATCTCATGGCTTAAAAAAAGGGGAAAAGCCTCACGATCCATCATCGGTCACAATCGGAATGAATTTTCTCATCTTCGATCGTCAAATACCGTACCTTTGTTTTGTCATCATCTTAATCATCATCATCATCATTTTGAACTTGTAAATGTGAACTTTGCGTGACGCGCAAAAAAAAAA]

[+] EMBL AL693632             [ATNGCCCCGAGGCTTACACAGATCACCGAACCGGTAGCCCTGTAGAACCGGACGCAGCAACAGCACCAACAGAAACGACTACAGAAACAGAGCCAGCAGCCGCGGCGTCTTCGGAGAAAACACAAGAAAAGGTCACAACAAATGATGCCGACGCGGAAAAGATGGACGTCGATTCGGACCAGTTGCCCACAGCCAGCACGGTGGAGCC GCCGGTTGATACAGCGGTTGCCGAAGCAGAAAAGCAAGTCACCGTTGAGCAATCTGACATTGCAATGGAG GAAACTAAGAGCGATAATCAAACAACAGAGCAG GCGGAAAGCAGCACCACCAGAGTC GTCCCAGCAGAGGAAGCACCGAAGGAA GC GGAC GGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGC TGACCCTGCAGCAGCTGCTCGATCTGNTCCTAAACCAACAGAACGCACTG CCGTCACCAAGCTCGAGGGACTTTGCNATC GAGCGGGACGATTTCACTCGAGGCGCTGAAAA CGGTACAACCGTCGGCGAAG CGGGAAGGCTTCATCACCGTGCCGGACGTGACG TGG AACGATATCGGTTCgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08JBO             [                                                                                                                                                           GAAAAGATGGACGTCGATTTGGACCAGTTGCCCACAGCCAGCACGGTGGAGCC GCCGGTTGATACAGCGGTTGCCGAAGCAGAAAAGCAAGCCACCGTTGAGCAATCCGACATTGCAATGGAG GAAACTATGAGCGATAATCAAACAACAGAGCAG GCGGAAAGCATCACCACCACAGCC GTCCCAGCAGAGGAAGCACCGAA GAA GC GGAC GGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGC TGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCAAGCTCGAGGGACTTTGC ATC GAGCGAGACGATTTTA TCGAGGCGCTGAAAA CGGTACAACCGTCGGCGAA  CGGGAAGGCTTCATCACCGTGCCGGACGTGACG TGG AACGATATCGGTTCACTCGGCGA CATACGGG AGGAGCTGAAGCTAGC GATACTGG CGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACT GGGACTGACGGC TCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGGCAGTGCTTTCAGCGTGCCCGCAATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCGGAGGGCAGTGCGGGGACGCGCGTCGTTAACCAGCTGCTGACGGAGATGGACGGCATCGAGGAGCGCAAGGGCGTGTTCCTGATGGCGGCCACCAATCGGCCCGATATCGTCGATCCGGCCGTGATGCGTCCCGGTCGGCTGGACAAGATTCTGTACGTCGGACTGCCGGCCAAGGAGGATCGGGGTGGATATATTGCGTGCGCTGACGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AL695771             [                                                                                                                                                              tngcccGAGGTTTATTTGGACCAGTTGCCCACAGCCAGCACGGTGGAGCCTGCCGGTTGATACAGCGGTTGCCGAAGCAGAAAAGCAAGCCACCGTTGAGCAATCCGACATTGCAATGGAGTGAAACTATGAGCGATAATCAAACAACAGAGCAGNGCGGAAAGCATCACCACCACAGCCTGTCCCAGCAGAGGAAGCACCGAAGGAATGCTGGACTGGTGCTGATACCACAGTTTCAAAA CCTCCTCCGTCCCCCAGAAGCAAGAGCTTGA CCTGCAGCAGCTGCTCGATCTGCTCCTAAA CAACAGAACGCACTGCCTGTCACCAAGCTCGAGGGACTTTGC ATCTGAGCGAGACGATTTTA TCGAGGCGCTGAAAACCGGTACAACCGTCGGCGAAGCCGGGAAGGCTTCATTACCGTGCCGGACGTGACGTTGGAAACGATATCGGTTCACTCGGCGACCATACGGGNAGGAGCTGAAGCTAGCTGATACTGGCCGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACTGGGGACTGACGGCATCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08JBP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGACGGC TCCCTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGT CCGTCCGGCAGTG TTTCAGCGTGCCCGCAATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCAACTCGCTCTGCCCGAAGCGTTCCGACACGGCGGAGGGCAGTGCGGGGACGCGCGTCGTTAACCAGCTGCTGACGGAGATGGACGGCATCGAGGAGCGCAAGGGCGTGTTCCTGATGGCGGCCACCAATCGGCCCGATATCGTCGATCCGGCCGTGATGCGTCCCGGTCGGCTGGACAAGATTCTGTACGTCGGACTGCCGGCCAAGGAGGATC GGGTGGATATATTGCGTGCGCTGACGAAGAATCGCACCCAGCCACGGCTCGCGGACGACGTGGAGCTGGAGAAGGTGGCTGAACTTACCGAAGGCTACACTGGGGCCGATTTGGCTGGGCTGGTGCGGCAAGCGTCGCTGCAAACGCTTAAAGATTCTATTGTGGCGAGCAGCTTGCAGGAGGAGACGGCTGGAGGGGAAACAACTGCCGAGGATGAGCTGTCGTTGATGGTTCGGTTCGAACACTTCACCCAAGCGATACGCAACATCAAACCATCGGTTAATGCTGAGGACAAAAAGCATTACGAAAAGTTACGCCTCAAGTATGGCGTTAATCTCATGGCTTAAAAAAAGGGGAAAAGCCTCACGATCCATCATCGGTCACAATCGGAATGAATTTTCTCATCTTCGATCGTCAAATACCGTACCTTTGTTTTGTCATCATCTTAATCATCATCATCATCATTTTGAACTTGTAAATGTGAACTTTGCGTGACGCGCAAAAAAAAAA]


>consensus_7896#0 ATNGCCCCGAGGCTTACACAGATCACCGAACCGGTAGCCCTGTAGAACCGGACGCAGCAA CAGCACCAACAGAAACGACTACAGAAACAGAGCCAGCAGCCGCGGCGTCTTCGGAGAAAA CACAAGAAAAGGTCACAACAAATGATGCCGACGCGGAAAAGATGGACGTCGATTTGGACC AGTTGCCCACAGCCAGCACGGTGGAGCCGCCGGTTGATACAGCGGTTGCCGAAGCAGAAA AGCAAGCCACCGTTGAGCAATCCGACATTGCAATGGAGGAAACTATGAGCGATAATCAAA CAACAGAGCAGGCGGAAAGCATCACCACCACAGCCGTCCCAGCAGAGGAAGCACCGAAGG AAGCGGACGGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGC TGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCA AGCTCGAGGGACTTTGCATCGAGCGAGACGATTTTATCGAGGCGCTGAAAACGGTACAAC CGTCGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGACGTGACGTGGAACGATATCGGTT CACTCGGCGACATACGGGAGGAGCTGAAGCTAGCGATACTGGCGCCGGTTAAGTTCCCCC ATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCG GGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCT CCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGGC AGTGCTTTCAGCGTGCCCGCAATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCGACT CGCTCTGCCCGAAGCGTTCCGACACGGCGGAGGGCAGTGCGGGGACGCGCGTCGTTAACC AGCTGCTGACGGAGATGGACGGCATCGAGGAGCGCAAGGGCGTGTTCCTGATGGCGGCCA CCAATCGGCCCGATATCGTCGATCCGGCCGTGATGCGTCCCGGTCGGCTGGACAAGATTC TGTACGTCGGACTGCCGGCCAAGGAGGATCGGGGTGGATATATTGCGTGCGCTGACGAAG AATCGCACCCAGCCACGGCTCGCGGACGACGTGGAGCTGGAGAAGGTGGCTGAACTTACC GAAGGCTACACTGGGGCCGATTTGGCTGGGCTGGTGCGGCAAGCGTCGCTGCAAACGCTT AAAGATTCTATTGTGGCGAGCAGCTTGCAGGAGGAGACGGCTGGAGGGGAAACAACTGCC GAGGATGAGCTGTCGTTGATGGTTCGGTTCGAACACTTCACCCAAGCGATACGCAACATC AAACCATCGGTTAATGCTGAGGACAAAAAGCATTACGAAAAGTTACGCCTCAAGTATGGC GTTAATCTCATGGCTTAAAAAAAGGGGAAAAGCCTCACGATCCATCATCGGTCACAATCG GAATGAATTTTCTCATCTTCGATCGTCAAATACCGTACCTTTGTTTTGTCATCATCTTAA TCATCATCATCATCATTTTGAACTTGTAAATGTGAACTTTGCGTGACGCGCAAAAAAAAA A



consensusID : consensus_7896#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [ATCCCCNCGAGTTATGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGANGTGACGTGGAACGATATCGGTTCGCTCGGCGACATACGGGAGGAGCTGAAGCTTGCGATACTGGCGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCCGGTGTGCTGCTCTGTGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCACAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTGCGGCAGTGCTTTCAGCGTGCCCGCAATNTCTGCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCAGGAGGGCAGATGCAGGGGANGCGCGTCGTACAACCAGACTGCTGACGGAGATGGACGGCATCGAGNGAGCGCAAGGGTGTGTTCCTGATGGCGGACACCAATCGGCCGACATCGTCGATCCGNGCGTGCTGACGTCCCGGTCGGTTGGACCAAGATTCTGTACCGTCCGGACTGCCGGCCAAGAGGATCGGGTGGAATATATTTGCGTGCGCTGACGNAAAATCGCACACCCCAAACAACAGGCTCAGCAGGACGGAAAGTGGAGCTGGGTAGCAATGGTGGGCTGAAACTTTACCGGANAGGCTNACCACTGGGGGCCAGCATTTGCTGCGAGCTGGTNCGGGCAAAGCGNGTANCTGCACAACGCTTAAAGATCCTATTGACGGCGACGACCAGCTTGCAAGGAGCANANCAGACTGCAAGAGGAAAGA]

[+] EMBL AL694593             [ATCCCCNCGAGTTATGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGANGTGACGTGGAACGATATCGGTTCGCTCGGCGACATACGGGAGGAGCTGAAGCTTGCGATACTGGCGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCCGGTGTGCTGCTCTGTGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCACAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTGCGGCAGTGCTTTCAGCGTGCCCGCAATNTCTGCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCAGGAGGGCAGATGCAGGGGANGCGCGTCGTACAACCAGACTGCTGACGGAGATGGACGGCATCGAGNGAGCGCAAGGGTGTGTTCCTGATGGCGGACACCAATCGGCCGACATCGTCGATCCGNGCGTGCTGACGTCCCGGTCGGTTGGACCAAGATTCTGTACCGTCCGGACTGCCGGCCAAGAGGATCGGGTGGAATATATTTGCGTGCGCTGACGNAAAATCGCACACCCCAAACAACAGGCTCAGCAGGACGGAAAGTGGAGCTGGGTAGCAATGGTGGGCTGAAACTTTACCGGANAGGCTNACCACTGGGGGCCAGCATTTGCTGCGAGCTGGTNCGGGCAAAGCGNGTANCTGCACAACGCTTAAAGATCCTATTGACGGCGACGACCAGCTTGCAAGGAGCANANCAGACTGCAAGAGGAAAGA]


>consensus_7896#1 ATCCCCNCGAGTTATGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGANGTGACGTGGAA CGATATCGGTTCGCTCGGCGACATACGGGAGGAGCTGAAGCTTGCGATACTGGCGCCGGT TAAGTTCCCCCATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCCGGTGTGCTGCTCTG TGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCACAACGAGGCGGGAA TTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGC GTGCCGTGCGGCAGTGCTTTCAGCGTGCCCGCAATNTCTGCCCCTGTGTCATCTTTTTCG ACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCAGGAGGGCAGATGCAGGGGA NGCGCGTCGTACAACCAGACTGCTGACGGAGATGGACGGCATCGAGNGAGCGCAAGGGTG TGTTCCTGATGGCGGACACCAATCGGCCGACATCGTCGATCCGNGCGTGCTGACGTCCCG GTCGGTTGGACCAAGATTCTGTACCGTCCGGACTGCCGGCCAAGAGGATCGGGTGGAATA TATTTGCGTGCGCTGACGNAAAATCGCACACCCCAAACAACAGGCTCAGCAGGACGGAAA GTGGAGCTGGGTAGCAATGGTGGGCTGAAACTTTACCGGANAGGCTNACCACTGGGGGCC AGCATTTGCTGCGAGCTGGTNCGGGCAAAGCGNGTANCTGCACAACGCTTAAAGATCCTA TTGACGGCGACGACCAGCTTGCAAGGAGCANANCAGACTGCAAGAGGAAAGA



consensusID : consensus_7896#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [ATNGCCNCGAGGTCCGTCCCAGCAGAGGAAGCACCGAAGGAAGCGGACGGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGCTGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCAAGCTCGAGGGACTTTGCATCGAGCGAGACGATTTTATCGAGGCGCTGAAAACGGTACAACCGTCGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGACGTGACGTGGAACGATATCGGTTCACTCGGCGACATACGGGAGGAGCTGAAGCTAGCGATACTGGCGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGGCAGTGCTTTCAGCGTGCCCGCAATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCGGAGGGCAGTGCGGGGACGGCGCGTCGGTTAACACAGCTGCTG]

[+] EMBL AL932535             [ATNGCCNCGAGGTCCGTCCCAGCAGAGGAAGCACCGAAGGAAGCGGACGGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGCTGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCAAGCTCGAGGGACTTTGCATCGAGCGAGACGATTTTATCGAGGCGCTGAAAACGGTACAACCGTCGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGACGTGACGTGGAACGATATCGGTTCACTCGGCGACATACGGGAGGAGCTGAAGCTAGCGATACTGGCGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGGCAGTGCTTTCAGCGTGCCCGCAATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCCGACACGGCGGAGGGCAGTGCGGGGACGGCGCGTCGGTTAACACAGCTGCTG]


>consensus_7896#2 ATNGCCNCGAGGTCCGTCCCAGCAGAGGAAGCACCGAAGGAAGCGGACGGTGCTGATACC ACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGCTGACCCTGCAGCAGCTGCTC GATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCAAGCTCGAGGGACTTTGCATC GAGCGAGACGATTTTATCGAGGCGCTGAAAACGGTACAACCGTCGGCGAAGCGGGAAGGC TTCATCACCGTGCCGGACGTGACGTGGAACGATATCGGTTCACTCGGCGACATACGGGAG GAGCTGAAGCTAGCGATACTGGCGCCGGTTAAGTTCCCCCATCGGTTGAAGCTACTGGGA CTGACGGCTCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCGGGTGCGGCAAAACCCTTCTT GCCAAAGCGGTCGCCAACGAGGCGGGAATTAACTTCATCTCCGTCAAGGGACCGGAACTG CTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGGCAGTGCTTTCAGCGTGCCCGC AATTCTGCCCCCTGTGTCATCTTTTTCGACGAGTTCGACTCGCTCTGCCCGAAGCGTTCC GACACGGCGGAGGGCAGTGCGGGGACGGCGCGTCGGTTAACACAGCTGCTG



consensusID : consensus_7896#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 486
fasta sequence
                              [NAAAAGGGGAAAAGCCACACGATCCATCATCGGTCACAATCGGAATGAATTTTCTAATCTTCGATCGTCGAATACCGCACCTTTGTTTTGTTATCCATGCATCGATCATCCATCATTTTGAACTTGTAAATGTGAACTTCGCGTGACGCGCAACCGTTTTTTCGGTTTAGTTCTTGTTTTGTCTGCAGTAAATGAGTATCACAAAATCACATTCTTCGGATTTCGCAAACAAACTTGCGGTATTAGCGTTGAAAAAAAAAAACAGGATAATAATTTAAGATAAATTTAGTTCGTAAGCTTGCCCTTCTTCGTTTCCGTAATTCGCTGTTTGTGAGCTGTTAACGTGTAACGTAAGCATTGCGGGGATTGTCGTAGACCCGCTGCACGTGCGCGGCTCCCTAAAACCTGACACTTTAATGTAACAAATCGTACGAAATACCAATAAAAAACAAACAAGGAAAAAAATACAANCAAAAGGCAGCATGT]

[-] EMBL BX466707             [NAAAAGGGGAAAAGCCACACGATCCATCATCGGTCACAATCGGAATGAATTTTCTAATCTTCGATCGTCGAATACCGCACCTTTGTTTTGTTATCCATGCATCGATCATCCATCATTTTGAACTTGTAAATGTGAACTTCGCGTGACGCGCAACCGTTTTTTCGGTTTAGTTCTTGTTTTGTCTGCAGTAAATGAGTATCACAAAATCACATTCTTCGGATTTCGCAAACAAACTTGCGGTATTAGCGTTGAAAAAAAAAAACAGGATAATAATTTAAGATAAATTTAGTTCGTAAGCTTGCCCTTCTTCGTTTCCGTAATTCGCTGTTTGTGAGCTGTTAACGTGTAACGTAAGCATTGCGGGGATTGTCGTAGACCCGCTGCACGTGCGCGGCTCCCTAAAACCTGACACTTTAATGTAACAAATCGTACGAAATACCAATAAAAAACAAACAAGGAAAAAAATACAANCAAAAGGCAGCATGT]
[+] EMBL BX618153             [                                                                                                                                                                                                                                                                                                                        TTCCGTAATTCGCTGTTTGTGAGCTGTTAACGTGTAACGTAAGCATTGCGGGGATTGTCGTAGACCCGCTGCACGTGCGCGGCTCCCTAAAACCTGACACTTTAATGTAACAAATCGTACGAAATACCAATAAAAA                                      ]


>consensus_7896#3 NAAAAGGGGAAAAGCCACACGATCCATCATCGGTCACAATCGGAATGAATTTTCTAATCT TCGATCGTCGAATACCGCACCTTTGTTTTGTTATCCATGCATCGATCATCCATCATTTTG AACTTGTAAATGTGAACTTCGCGTGACGCGCAACCGTTTTTTCGGTTTAGTTCTTGTTTT GTCTGCAGTAAATGAGTATCACAAAATCACATTCTTCGGATTTCGCAAACAAACTTGCGG TATTAGCGTTGAAAAAAAAAAACAGGATAATAATTTAAGATAAATTTAGTTCGTAAGCTT GCCCTTCTTCGTTTCCGTAATTCGCTGTTTGTGAGCTGTTAACGTGTAACGTAAGCATTG CGGGGATTGTCGTAGACCCGCTGCACGTGCGCGGCTCCCTAAAACCTGACACTTTAATGT AACAAATCGTACGAAATACCAATAAAAAACAAACAAGGAAAAAAATACAANCAAAAGGCA GCATGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7896#0      ATNGCCCCGAGGCTTACACAGATCACCGAACCGGTAGCCCTGTAGAACCGGACGCAGCAA 60
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      CAGCACCAACAGAAACGACTACAGAAACAGAGCCAGCAGCCGCGGCGTCTTCGGAGAAAA 120
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      CACAAGAAAAGGTCACAACAAATGATGCCGACGCGGAAAAGATGGACGTCGATTTGGACC 180
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      AGTTGCCCACAGCCAGCACGGTGGAGCCGCCGGTTGATACAGCGGTTGCCGAAGCAGAAA 240
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      AGCAAGCCACCGTTGAGCAATCCGACATTGCAATGGAGGAAACTATGAGCGATAATCAAA 300
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      CAACAGAGCAGGCGGAAAGCATCACCACCACAGCCGTCCCAGCAGAGGAAGCACCGAAGG 360
consensus_7896#2      --------------------ATNGCCNCGAGGTCCGTCCCAGCAGAGGAAGCACCGAAGG 40
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      AAGCGGACGGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGC 420
consensus_7896#2      AAGCGGACGGTGCTGATACCACAGTTTCAAAACCCTCCTCCGTCCCCCAGAAGCAAGAGC 100
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      TGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCA 480
consensus_7896#2      TGACCCTGCAGCAGCTGCTCGATCTGCTCCTAAACCAACAGAACGCACTGCCCGTCACCA 160
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      AGCTCGAGGGACTTTGCATCGAGCGAGACGATTTTATCGAGGCGCTGAAAACGGTACAAC 540
consensus_7896#2      AGCTCGAGGGACTTTGCATCGAGCGAGACGATTTTATCGAGGCGCTGAAAACGGTACAAC 220
consensus_7896#1      -------------------------------------------------ATCCCCNCGAG 11
consensus_7896#3      ---------------------------------------------------------NAA 3
                                                                                * 

consensus_7896#0      CGTCGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGACGTGACGTGGAACGATATCGGTT 600
consensus_7896#2      CGTCGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGACGTGACGTGGAACGATATCGGTT 280
consensus_7896#1      TTATGGCGAAGCGGGAAGGCTTCATCACCGTGCCGGANGTGACGTGGAACGATATCGGTT 71
consensus_7896#3      AAGGGGAAAAGCCACACGA-TCCATCATCG-GTCACAATCGGAATGAATTTTCTAATCTT 61
                          **  ****   * *  * ***** ** * *  *   *   ** *          **

consensus_7896#0      CACTCGGCGACATACGGGAGGAGCTGAAGCTAGCGATACTGGCGCCGGTTAAGTTCCCCC 660
consensus_7896#2      CACTCGGCGACATACGGGAGGAGCTGAAGCTAGCGATACTGGCGCCGGTTAAGTTCCCCC 340
consensus_7896#1      CGCTCGGCGACATACGGGAGGAGCTGAAGCTTGCGATACTGGCGCCGGTTAAGTTCCCCC 131
consensus_7896#3      CGATCGTCGA-ATACCGCA---CCTTTGTTTTGTTATCCATGCATCGATCA------TCC 111
                      *  *** *** **** * *    **     * *  ** *  **  ** * *       **

consensus_7896#0      ATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCG 720
consensus_7896#2      ATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCTGGTGTGCTGCTGTGCGGGCCGCCCG 400
consensus_7896#1      ATCGGTTGAAGCTACTGGGACTGACGGCTCCGTCCGGTGTGCTGCTCTGTGGGCCGCCCG 191
consensus_7896#3      ATCATTTTGAACT--TGTAAATGTGAACTTCGCGTGACGCGCAACCGTTTTTTCGGTTTA 169
                      ***  **  * **  **  * **    ** **   *  * **  *  *     * *    

consensus_7896#0      GGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGC-CAACGAGGCGGGAATTAACTTCATC 779
consensus_7896#2      GGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGC-CAACGAGGCGGGAATTAACTTCATC 459
consensus_7896#1      GGTGCGGCAAAACCCTTCTTGCCAAAGCGGTCGCACAACGAGGCGGGAATTAACTTCATC 251
consensus_7896#3      GTTCTTG--------TTTTGTCTGCAGTAAATGAGTATCACAAAATCACATTCTTCGGAT 221
                      * *   *        ** *  *   **     *   * *        *  *   *     

consensus_7896#0      TCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGG 839
consensus_7896#2      TCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTCCGG 519
consensus_7896#1      TCCGTCAAGGGACCGGAACTGCTGAACATGTACGTCGGTGAATCGGAGCGTGCCGTGCGG 311
consensus_7896#3      TTCGCAAACAAACTTGCGGTATT-AGCGTTGAAAAAAAAAAACAGGATAATAATTTAAGA 280
                      * **  **   **  *   *  * * * *  *        **  ***   *    *  * 

consensus_7896#0      CAGTGCTT-TCAGCGTGCCCGCAATTCTGC-CCCCTGTGTCATCTTTTTCGACGAGTTCG 897
consensus_7896#2      CAGTGCTT-TCAGCGTGCCCGCAATTCTGC-CCCCTGTGTCATCTTTTTCGACGAGTTCG 577
consensus_7896#1      CAGTGCTT-TCAGCGTGCCCGCAATNTCTG-CCCCTGTGTCATCTTTTTCGACGAGTTCG 369
consensus_7896#3      TAAATTTAGTTCGTAAGCTTGCCCTTCTTCGTTTCCGTAATTCGCTGTTTG-TGAGCTGT 339
                       *    *  *  *   **  **  *         * **       * ** *  *** *  

consensus_7896#0      ACTCGCTCTGCCCGAAGCGTTCCGAC-ACGGC-GGAGGGCAG-TGCGGGGACG-CGCGTC 953
consensus_7896#2      ACTCGCTCTGCCCGAAGCGTTCCGAC-ACGGC-GGAGGGCAG-TGCGGGGACGGCGCGTC 634
consensus_7896#1      ACTCGCTCTGCCCGAAGCGTTCCGAC-ACGGCAGGAGGGCAGATGCAGGGGANGCGCGTC 428
consensus_7896#3      TAACG-TGTAACGTAAGCATTGCGGGGATTGTCGTAGACCCGCTGCACGTGCGCGGCTCC 398
                         ** * *  *  **** ** **   *  *  * **  * * ***  *      **  *

consensus_7896#0      G-TTAAC-CAGCTGCTGACGGAGATGGACGGCATCGAGG-AGCGCAAGGGCGTGTTCCTG 1010
consensus_7896#2      GGTTAACACAGCTGCTG------------------------------------------- 651
consensus_7896#1      GTACAACCAGACTGCTGACGGAGATGGACGGCATCGAGNGAGCGCAAGGGTGTGTTCCTG 488
consensus_7896#3      CTAAAACCTGACACTTTAATGTAACAAATCGTA-CGAAATACCAATAAAAAACAAACAAG 457
                          ***    *   *                                            

consensus_7896#0      ATGGCGGCCACCAATCGGCCCGATATCGTCGATCCGGCCGTGATGCGTCCCGGTCGGCTG 1070
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ATGGCGGACACCAATCGGCCGACATCGTCGATCCGNGCGTGCTGACGTCCCGGTCGGTTG 548
consensus_7896#3      GAAAAAAATAC-AANCAAAAGGCAGCATGT------------------------------ 486
                                                                                  

consensus_7896#0      GACAAGATTCTGTACGTCGGACTGCCGGCCAAGGAGGATCGGGGTGGATATATTGCGTGC 1130
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      GACCAAGATTCTGTACCGTCCGGACTGCCGGCCAAGAGGATCGGGTGGAATATATTTGCG 608
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      GCTGACGAAGAATCGCACCCAGCCACGGCTCGCGGACGACGTGGAGCTGGAGAAGGTGGC 1190
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      TGCGCTGACGNAAAATCGCACACCCCAAACAACAGGCTCAGCAGGACGGAAAGTGGAGCT 668
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      TGAACTTACCGAAGGCTACACTGGGGCCGATTTGGCTGGGCTGGTGCGGCAAGCGTCGCT 1250
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      GGGTAGCAATGGTGGGCTGAAACTTTACCGGANAGGCTNACCACTGGGGGCCAGCATTTG 728
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      GCAAACGCTTAAAGATTCTATTGTGGCGAGCAGCTTGCAGGAGGAGACGGCTGGAGGGGA 1310
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      CTGCGAGCTGGTNCGGGCAAAGCGNGTANCTGCACAACGCTTAAAGATCCTATTGACGGC 788
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      AACAACTGCCGAGGATGAGCTGTCGTTGATGGTTCGGTTCGAACACTTCACCCAAGCGAT 1370
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      GACGACCAGCTTGCAAGGAGCANANCAGACTGCAAGAGGAAAGA---------------- 832
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      ACGCAACATCAAACCATCGGTTAATGCTGAGGACAAAAAGCATTACGAAAAGTTACGCCT 1430
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      CAAGTATGGCGTTAATCTCATGGCTTAAAAAAAGGGGAAAAGCCTCACGATCCATCATCG 1490
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      GTCACAATCGGAATGAATTTTCTCATCTTCGATCGTCAAATACCGTACCTTTGTTTTGTC 1550
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      ATCATCTTAATCATCATCATCATCATTTTGAACTTGTAAATGTGAACTTTGCGTGACGCG 1610
consensus_7896#2      ------------------------------------------------------------
consensus_7896#1      ------------------------------------------------------------
consensus_7896#3      ------------------------------------------------------------
                                                                                  

consensus_7896#0      CAAAAAAAAAA 1621
consensus_7896#2      -----------
consensus_7896#1      -----------
consensus_7896#3      -----------
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)