These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7914#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1375 fasta sequence [TTTCTGCA-CGATTGGC-ACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATG-AGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGGAAAGAATGCAAATGAGCCACAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCCAAAAGCAAGAACACAGAACGAAGGAAAGCGGCAACAGAGGTCGATAAGCCTTCGAAGAGTGAGAAACGCAAAGGAAAGAAGAGAAAAGCCGATGATGGAAACGGAAAAAGTGACGAAACGGTTGACGATGCAGGGTCTCAAAAGCACCAGAAAAAGGTGAAACCGAATGAAACCGTGACTGTTAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCAAATGGTAGCGAGAAAAAAGATAAGACCACAAATGCAAAAACCAAACCAGCCAGCTTGAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCGTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGATGCCCAAAGATACGATTATAG-CCGATTTCGGTTGCGGAGAGGCAAAGCTGGCGGCATCCGTA-CCGAACAAGGTGTACTCGCTCGATCTGGTGGCGAATCACAACGGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAACTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGTGTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCGTCGCGCTT-CGAGAACGTGAACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATTCTTGACTGAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTCC] [+] EMBL CNS08UMD [TTTCTGCACCGATTGGCAACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATG AGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGGAA ] [+] EMBL CNS08OW7 [ TTATGCA CGATTGGC ACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATGTAGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGAAGAGAATGCAAATGAGCCACAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCCAAAAGCAAGAACACAGAACGAAGGAAAGCGGCAACAGAGGTCGATAAGCCTTCGAAGAGTGAGA ] [+] EMBL AL694400 [ gTTTTTCCATAACTCATTTCGTTTCATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTAAAAAATCTAACAACATG AGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAGACC ] [+] EMBL BM610721 [ ccgAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCCAAAAGCAAGAACGCAGAACGAAGGAAAGCGGCAACAGAGGTCGATGAGCCTTCGAAGAGTGAGAAACGCAAAGGAAAGAAGAGAAAAGCCGATGATGGAAACGGAAAAAGTGACGAAACGGTTGACGATGCAGGGTCTCAAAAGCACCAGAAAAAGGTGAAACCGAATGAAACCGTGACTGTTAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCAAATGGTAGCGAGAAAAAAGATAAGACCACAAATGCAAAAGTAAAACCAGTCAGCTTGAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGATCCGGCCTCGTTCGAAGCGTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGATGCCCAAAGATACGATTATAGCCCGATTTCGGTTGCGGAGAGGCAAAGCTGGCGGCATCCGTACCCGAACAAGGTGTACTCGCTCGATCTGGTGGCAAATCACAACGGTGTAATTGC ] [+] EMBL CNS09PSA [ CGAATGAGAGCGTGACTGTGAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCGAATGGCACCGAGAAAAAAGATAAGACCCCAAATGCAAAAACCAAACCAGCCAGCTTGAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCGTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGATGCCCAAAGATACGATTATAG CCGATTTCGGTTGCGGAGAGGCAAAGCTGGCGGCATCCGTA CCGAACAAGGTGTACTCGCTCGATCTGGTGGCGAATCACAACGGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAACTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGTGTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCGTCGCGCTT CGAGAACGTGAACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATTCTTGACTGAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTCC] [-] EMBL CNS08OW8 [ TGCAAAAACCAAACCAGCCAGCTTTAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGGGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCTTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGTTGCCCAAAGATACGATTATAG CCGATTTCGGTTGCGAAGAGGCAAAGCTGGCGGCATCCGTA CCGAACAAGGTGTAATCGCTCGATCTGGTGGCGAATCACAACGGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAATTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGTGTCCTTAAAGatt ] [-] EMBL CNS09PSB [ GCTCGAGGGCAACTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAAAAGCAAACCGTGTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCCTCGCGCTT CGAGAACGTGAACGAATTTGTAAACAATGTGAAGAATTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATAAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATTCTTa ] [-] EMBL CNS08UME [ CTTCCGAGAACGTGAACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAA ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||