Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7914 cluster # 7914       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7914#0 length = 1375 sequences # 8  

consensusID : consensus_7914#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1375
fasta sequence
                              [TTTCTGCA-CGATTGGC-ACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATG-AGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGGAAAGAATGCAAATGAGCCACAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCCAAAAGCAAGAACACAGAACGAAGGAAAGCGGCAACAGAGGTCGATAAGCCTTCGAAGAGTGAGAAACGCAAAGGAAAGAAGAGAAAAGCCGATGATGGAAACGGAAAAAGTGACGAAACGGTTGACGATGCAGGGTCTCAAAAGCACCAGAAAAAGGTGAAACCGAATGAAACCGTGACTGTTAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCAAATGGTAGCGAGAAAAAAGATAAGACCACAAATGCAAAAACCAAACCAGCCAGCTTGAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCGTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGATGCCCAAAGATACGATTATAG-CCGATTTCGGTTGCGGAGAGGCAAAGCTGGCGGCATCCGTA-CCGAACAAGGTGTACTCGCTCGATCTGGTGGCGAATCACAACGGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAACTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGTGTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCGTCGCGCTT-CGAGAACGTGAACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATTCTTGACTGAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTCC]

[+] EMBL CNS08UMD             [TTTCTGCACCGATTGGCAACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATG AGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08OW7             [ TTATGCA CGATTGGC ACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATGTAGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGAAGAGAATGCAAATGAGCCACAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCCAAAAGCAAGAACACAGAACGAAGGAAAGCGGCAACAGAGGTCGATAAGCCTTCGAAGAGTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL694400             [                    gTTTTTCCATAACTCATTTCGTTTCATTTTGCGGCATCGTGGTGCTTTAATAATAGGTAAAGTATTAAAAAATCTAACAACATG AGCAAACTATTCGAAGAATGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAGCAACCAAAAGAACAGAAAAAGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM610721             [                                                                                                                                                                                                                                                          ccgAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCCAAAAGCAAGAACGCAGAACGAAGGAAAGCGGCAACAGAGGTCGATGAGCCTTCGAAGAGTGAGAAACGCAAAGGAAAGAAGAGAAAAGCCGATGATGGAAACGGAAAAAGTGACGAAACGGTTGACGATGCAGGGTCTCAAAAGCACCAGAAAAAGGTGAAACCGAATGAAACCGTGACTGTTAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCAAATGGTAGCGAGAAAAAAGATAAGACCACAAATGCAAAAGTAAAACCAGTCAGCTTGAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGATCCGGCCTCGTTCGAAGCGTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGATGCCCAAAGATACGATTATAGCCCGATTTCGGTTGCGGAGAGGCAAAGCTGGCGGCATCCGTACCCGAACAAGGTGTACTCGCTCGATCTGGTGGCAAATCACAACGGTGTAATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09PSA             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAATGAGAGCGTGACTGTGAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCGAATGGCACCGAGAAAAAAGATAAGACCCCAAATGCAAAAACCAAACCAGCCAGCTTGAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCGTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGATGCCCAAAGATACGATTATAG CCGATTTCGGTTGCGGAGAGGCAAAGCTGGCGGCATCCGTA CCGAACAAGGTGTACTCGCTCGATCTGGTGGCGAATCACAACGGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAACTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGTGTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCGTCGCGCTT CGAGAACGTGAACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATTCTTGACTGAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTCC]
[-] EMBL CNS08OW8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCAAAAACCAAACCAGCCAGCTTTAGAGAAAAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGGGCAGCTGTACAAAATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCTTATCACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATTAAAAGTATCCTGAAGTTGCCCAAAGATACGATTATAG CCGATTTCGGTTGCGAAGAGGCAAAGCTGGCGGCATCCGTA CCGAACAAGGTGTAATCGCTCGATCTGGTGGCGAATCACAACGGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAATTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGTGTCCTTAAAGatt                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS09PSB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTCGAGGGCAACTTTGTGAATGTGGTCGTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAAAAGCAAACCGTGTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCCTCGCGCTT CGAGAACGTGAACGAATTTGTAAACAATGTGAAGAATTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATAAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATTCTTa                                                   ]
[-] EMBL CNS08UME             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTCCGAGAACGTGAACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAGCACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACCAAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGTCTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAA                                                          ]


>consensus_7914#0 TTTCTGCACGATTGGCACCTTTTCCCATAACTCATTTCGTTTTATTTTGCGGCATCGTGG TGCTTTAATAATAGGTAAAGTATTGAAAAATCTAACAGCATGAGCAAACTATTCGAAGAA TGTGAGTGGGAAGATGATTTACCAACGATCGGAACTAACTTCCGTTTCACGAAAACTAAG CAACCAAAAGAACAGAAAAAAACCAAAGGTAAATCAGAATCCAGCAATGGAAAGAATGCA AATGAGCCACAAACTAACGGCCAGCACGGTGCCGGCTGGTCTGTTCTGCTAAAAAATCCC AAAAGCAAGAACACAGAACGAAGGAAAGCGGCAACAGAGGTCGATAAGCCTTCGAAGAGT GAGAAACGCAAAGGAAAGAAGAGAAAAGCCGATGATGGAAACGGAAAAAGTGACGAAACG GTTGACGATGCAGGGTCTCAAAAGCACCAGAAAAAGGTGAAACCGAATGAAACCGTGACT GTTAATGGAACTAAAAAACAGAGCGAAAATTCATCTCCCTCCGAGCACCCGAAGTCAAAT GGTAGCGAGAAAAAAGATAAGACCACAAATGCAAAAACCAAACCAGCCAGCTTGAGAGAA AAACTAGTGGAAAGTCTGAAAGGCTCGCGGTTCCGTTTCATCAACGAGCAGCTGTACAAA ATCCCTGGCCAGGAGGCGAAAAAAATGTTTCAGGAAGACCCGGCCTCGTTCGAAGCGTAT CACGATGGCTACCGGCAACAGGTCGAGCAATGGCCCATGAACCCGCTAGATCGAATGATT AAAAGTATCCTGAAGATGCCCAAAGATACGATTATAGCCGATTTCGGTTGCGGAGAGGCA AAGCTGGCGGCATCCGTACCGAACAAGGTGTACTCGCTCGATCTGGTGGCGAATCACAAC GGCGTAATTGCCTGCGACATGGCAAACACACCGCTCGAGAGCAACTTTGTGAATGTGGTC GTGTTTTGCCTATCGCTGATGGGTACCAATTTGGTTGACTTTTTGCTAGAAGCAAACCGT GTCCTTAAAGTTGGGGGCATTATGAAGATTGCGGAAGTTGCGTCGCGCTTCGAGAACGTG AACGAATTTGTAAACAATGTGAAGAAGTGTGGCTTCCAGTTGCAAACGAAGGACCTAAAG CACAAGCTGTTCTCCTTCTTTATCTTTAAGAAGGATCGCACCGTCATCAAAGGCTCGACC AAAATCAAACAGTTTAGCTTAAAGCCATGTTTGTACAAGAAACGTTAAGGGAAGAAATGT CTCAATATTGAATACTAATACGTTGCTTTGCGATCGTATTACGCTGAAATAAAATAAATT CTTGACTGAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTCC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)