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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1100 fasta sequence
[TCGATTAGAGAGCAAACGGGCCACGTTCGATTTGCTGAAAATTGAACTAAACCGGATCCGATTGTGTCCGAACCGCCGATGCCACGCGTACCATCATCCTACAGAACGATCCTCCCAAGTCACGCAAAAACAATCGCTGGAAAGGATCGTCTGCTAGAGAACCGTGCCACCACCGTGGCACCACACAAGATCCGTGCGTCGAAACACACGCGCGACTGCCCCCGCTTCTCCTCCCTCCAGTTTCCCGGCGATCGATCAAAAACCGATTTCTGTCAAACTATTTTAATTCTAGCATAAATTAAATTAAATAGATTTACATAGACATTGTCCTAATCGTTTGGATGGGGTGGGGTGTGGAGCCTTCCCATCTGGCGAAAGGATGCTCGCTCTCCCTCTCTCTCTCTGTGCGCTCATGCCTATCTCTCTATCTGTCTGTTTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGT--GTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATA-CCCGTTCTTAACAGTACACCACGCGCACCACCGCAC-AC-CCCCAC-GGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGACTTCAGGTAGGCGATCAGATCGCCACGCTC-CTGCGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGAGCGCACCGCTGCACAAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGTATAATCGCCACGGGCCCACGCGTCCGCGGACGCGTGGGCCGACGCGTCCGCGG]
[+] EMBL CNS08XZ1 [TCGATTAGAGAGCAAACGGGCCACGTTCGATTTGCTGAAAATTGAACTAAACCGGATCCGATTGTGTCCGAACCGCCGATGCCACGCGTACCATCATCCTACAGAACGATCCTCCCAAGTCACGCAAAAACAATCGCTGGAAAGGATCGTCTGCTAGAGAACCGTGCCACCACCGTGGCACCACACAAGATCCGTGCGTCGAAACACACGCGCGACTGCCCCCGCTTCTCCTCCCTCCAGTTTCCCGGCGATCGATCAAAAACCGATTTCTGTCAAACTATTTTAATTCTAGCATAAATTAAATTAAATAGATTTACATAGACATTGTCCTAATCGTTTGGATGGGGTGGGGTGTGGAGCCTTCCCATCTGGCGAAAGGATGCTCGCTCTCCCTCTCTCTCTCTGTGCGCTCATGCCTATCTCTCTATCTGTCTGTTTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGT GTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATA CCCGTTCTTAACAGTACACCACGCGCACCACCGCAC AC CCCCAC GGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCCGACTTCAGGTAGGCGATAAAATCGCCACGCTC CTTTGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGGGCGCAC ]
[-] EMBL BM591764 [ GCTCGCTCTCCTTCTCTCTCTCTGTGCGCTCATGCCTATCTCTCTATCTGTCTGTTTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGT GTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATA CCCGTTCTTAACAGTACACCACGCGCACCACCGCAC AC CCCCAC GGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGACTTCAGGTAGGCGATCAGATCGCCACGCTC CTGCGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGAGCGCACCGCTGCACAAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGTATAATCGCCACGGGCGGACGCGTGGGCGGACGCGTGGGCgg ]
[-] EMBL BM648006 [ TCGCTCTCC CTATCTCTCTGTGCGCTCATGCCTATCTCTCTATCTGTCTG TTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGTTGGTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATA CCCGTTCTTAACAGTACACCACGCGCACCACCGCAC AC CCCCAC GGGTAATTCAACCCCTTATGCACCTTACTTGGTGGCCGACTTCAGGTAGGCGATCAGATCGCCACGCTC CTGAGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATACCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCAACGGTGTGGCACTGAGCGCACCGCTGCACGAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGTGTAATCGCCACGGGCCCACGCGTCCGCGGACGCGTGGGTCG ]
[-] EMBL BM648172 [ CTCTCCCTCTCTCTCTCTGTGCGCTCATGCCTATCTCTCTATCTGTCTGTTTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGT GTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATA CCCGTTCTTAACAGTACACCACGCGCACCACCGCAC AC CCCCAC GGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGACTTCAGGTAGGCGATCAGATCGCCACGCTC CTGCGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGAGCGCACCGCTGCACAAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGTATAATCGCCACGGGCGGACGCGTGGGCGG ]
[-] EMBL BM608954 [ CTCTCTGTGCGCTCATGCCTATCTCTCTATCGGTCTGTTTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGT GTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATACCCCGTTCTTAACAGTACACCACGCGCACCACCGCACAACTCCCCACGGGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGACTTCAGGTAGGCGATCAGATCGCCACGCTCTCTGCGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGGGCGCACCGCTGTACGAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGTGTAATCGCCAC GCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGG]
[-] EMBL BM639638 [ AGCAGTGTTTTGGCTGAATTTAGGACACCGATA CCCGTTCTTAACAGTACACCACGCGCACCACCGCAC AC CCCCAC GGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGACTTCAGGTAGGCGATCAGATCGCCACGCTC CTGCGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGAGCGCACCGCTGCACAAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGTATAATCGCCAC CCCACGCGTCCGCGG ]
consensusID : consensus_7975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 637 fasta sequence
[GGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGTTGGTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATACCCGTTCTTAACAGTACACCACGCGCACCACCGCACACCCCCACGGGTAATTCAACCCCTTATGCACCTTACTTGGTGGCCGACTTCAGGTAGGCGATCAGATCGCCACGCTCCTGAGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATACCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCAACGGTGTGGCACTGAGCGCACCGCTGCACGAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGCGGACGCGTGGGTCGACGGGTCCGCCCACGCGTCCGCGG]
[-] EMBL BM625071 [GGTTCTTTTGCTGATCTTAAACGTTCCGAATCTCAATGGAGAAGAAGCTTGAGTGAGTTGGTGTGTGTGTTCTTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATACCCGTTCTTAACAGTACACCACGCGCACCACCGCACACCCCCACGGGTAATTCAACCCCTTATGCACCTTACTTGGTGGCCGACTTCAGGTAGGCGATCAGATCGCCACGCTCCTGAGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATACCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCAACGGTGTGGCACTGAGCGCACCGCTGCACGAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGCGGACGCGTGGGTCG ]
[-] EMBL BM634265 [ TTATTTCTCTCTTCTATCTGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATACCCGTTCTTAACAGTACACCACGCGCACCACCGCACACCCCCACGGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGACTTCAGGTAGGCGATCAGATCGCCACGCTCCTGCGGCTTCTTCAGACCGGCGAACACCATCTTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTCCAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTCTTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACGGTGTGGCACTGAGCGCACCG TGCACAAACAGCTTCTTGCCCTTCTCAACATCACCAGCTGGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTCAACCCAAGCGGGAGCGGGTGCAAACGCGCCCACGCGTCCGCCCACGGGTCCGCCCACGCGTCCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7975#0 TCGATTAGAGAGCAAACGGGCCACGTTCGATTTGCTGAAAATTGAACTAAACCGGATCCG 60
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 ATTGTGTCCGAACCGCCGATGCCACGCGTACCATCATCCTACAGAACGATCCTCCCAAGT 120
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 CACGCAAAAACAATCGCTGGAAAGGATCGTCTGCTAGAGAACCGTGCCACCACCGTGGCA 180
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 CCACACAAGATCCGTGCGTCGAAACACACGCGCGACTGCCCCCGCTTCTCCTCCCTCCAG 240
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 TTTCCCGGCGATCGATCAAAAACCGATTTCTGTCAAACTATTTTAATTCTAGCATAAATT 300
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 AAATTAAATAGATTTACATAGACATTGTCCTAATCGTTTGGATGGGGTGGGGTGTGGAGC 360
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 CTTCCCATCTGGCGAAAGGATGCTCGCTCTCCCTCTCTCTCTCTGTGCGCTCATGCCTAT 420
consensus_7975#1 ------------------------------------------------------------
consensus_7975#0 CTCTCTATCTGTCTGTTTCCTATTTCTTACGGTTCTTTTGCTGATCTTAAACGTTCCGAA 480
consensus_7975#1 ------------------------------GGTTCTTTTGCTGATCTTAAACGTTCCGAA 30
******************************
consensus_7975#0 TCTCAATGGAGAAGAAGCTTGAGTGAGT--GTGTGTGTGTTCTTATTTCTCTCTTCTATC 538
consensus_7975#1 TCTCAATGGAGAAGAAGCTTGAGTGAGTTGGTGTGTGTGTTCTTATTTCTCTCTTCTATC 90
**************************** ******************************
consensus_7975#0 TGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATACCCGTTCTTAACAGTACACCACGC 598
consensus_7975#1 TGTAGCAGTGTTTTGGCTGAATTTAGGACACCGATACCCGTTCTTAACAGTACACCACGC 150
************************************************************
consensus_7975#0 GCACCACCGCACACCCCCACGGGTAATTCGACCCCTTATGCACCTTACTTGGTGGCTGAC 658
consensus_7975#1 GCACCACCGCACACCCCCACGGGTAATTCAACCCCTTATGCACCTTACTTGGTGGCCGAC 210
***************************** ************************** ***
consensus_7975#0 TTCAGGTAGGCGATCAGATCGCCACGCTCCTGCGGCTTCTTCAGACCGGCGAACACCATC 718
consensus_7975#1 TTCAGGTAGGCGATCAGATCGCCACGCTCCTGAGGCTTCTTCAGACCGGCGAACACCATC 270
******************************** ***************************
consensus_7975#0 TTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTC 778
consensus_7975#1 TTCGTGCCGGGGATGTACTTCTTCGGGTTTTCCAGGTACTCGAACAGCGTGTCCTCGTTC 330
************************************************************
consensus_7975#0 CAGGTGATGCCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTC 838
consensus_7975#1 CAGGTGATACCCTTGGCCTTGTTGGCGTCGGTGTAGCTGAAGCCGGCGGCCTGGCCCGTC 390
******** ***************************************************
consensus_7975#0 TTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCGACG 898
consensus_7975#1 TTGCGGCCGAACAGTCCGTGCAGGTTCGGGCCGACCTTGTGCTTGCCACCGGCCTCAACG 450
******************************************************** ***
consensus_7975#0 GTGTGGCACTGAGCGCACCGCTGCACAAACAGCTTCTTGCCCTTCTCAACATCACCAGCT 958
consensus_7975#1 GTGTGGCACTGAGCGCACCGCTGCACGAACAGCTTCTTGCCCTTCTCAACATCACCAGCT 510
************************** *********************************
consensus_7975#0 GGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTC 1018
consensus_7975#1 GGGACACCCATTGTTGTTGGTTAAAGATTTGAAGAGCGCGGTTAGGCAAGGAAAATTTTC 570
************************************************************
consensus_7975#0 AACCCAAGCGGGAGCGGGTGCAAACGCGTATAATCGCCACGGGCCCACGCGTCCGCGGAC 1078
consensus_7975#1 AACCCAAGCGGGAGCGGGTGCAAACGCGCGGACGCGT---GGGTCGACGGGTCCGCCCAC 627
**************************** * ** *** * *** ****** **
consensus_7975#0 GCGTGGGCCGACGCGTCCGCGG 1100
consensus_7975#1 GCGTCCGCGG------------ 637
**** ** *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||