These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7984#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1914 fasta sequence [CGTTTGTTTCGAGAAAGGAAAAAGGGTGCAAAGTGCAAGATAAGACTCGAGTTGTGTAATGTTGCGTTTAATACGAATATGCGGTACAGCAGCATCAATAGCACCGAAATGGCCCCAACCAGCCTCTTCCCTCCTTCGGTACAGTACATTTTCCCCGCGGGAGTTCCACTACGAAACATCGGACGGCGAAAATGGCACACTGATGCATCGCTTCTCCCGGCACGTGTCCCACACGAA-GCGTGATTTTACCGACACAACCAAGTGCAGCTTAAAGGTGTCCAATTTCTACCCGCTGCCGGATGTGGGCACCTACGGGCAGCAGATACGCGATCTGGCAACCATCGATCTGGCCAAGCTGATCGCCTTTACGACCGATTTCCGCAGCAAAACGGATGTTCGATCGTACACGGAAGTCGTGAACGCGCTGGACGAGGAGTGTGTGCGCCGGGTCCCGAGGGCAACGACGAGCGAGCTGTTGGAAATGTTGCACTGCTTCATGTACCTGCTGCCGAACAAAATTGCCCAGCTCAAGTCGTACCAGGCGGCCATGCCGAAGCTGATCGAGCTGTTTGACGGTGCGGAAAATGAGCGAGACTTTCTGTCGATCGTTTTCTTCCTCGGCATGTGGAAGCGCAACAAAACGGGGGCGATGCTGATGAAGGAATTTCTGCAGCAACATCTGACCCGCTACCTCACACCGGACATGAGCCGGATGGATTTCGTCATACTGGCGAATGCAACGTACAAAACGAGTCTTCGAATGGTGGACGAATCGGATGCGTTTGGGAGCCGGCTAGTGAAGGAGATTGTTGAATTCGGGGATGGAGACGATTCGGCACTGCTGGTGACGCTGATAAAATGTGCCCGTATGAATCGGCTCGCTTCCGGGGAGATAGTGGAGAAGGTGCACTCGTTCACGGAGTCCAACATCGACAGTAAGGAGCTGGATTTCCGCGGCCTTTCGCATTTGTTCGCCTACATAGCGGACAATCGGATAAAGGACGACACGCTGGCGGGCCTGTTCGTGGAAGGATGCTGGAGCCGATTCGATGCGGAGGTGAGGAAACACGGATTCGAAACACAGTCACAATCCTGCCGGCCCAAGGATATCGCAACGTTTCTGTGGAGCTGTGCCACACTCGGTGTGCCGATCGAAACATACCCCGAAGTGAAAATGAACCTACTCGAAAAGGCAATACGGCTCAAGGTGGAAGCCGGCGAGTATCGGTACAGCTCCGATTTGCTGGTCGATACGATTCTTTCGCTGTGGATTTGTGACCGTAAATCGATCGCCCTCTTTCGGTTGCTGTTCAAAGATAAAGCGCTGGTGCAGAACTTCGGAAGGAGCGTGCCAAGCTGGAATCGCGCAAGGATTTGCTGCTTACCTGCGCGGAAATCGATTTGCCCGATGCGTGGGACATGATTCAAATCGATACGCAAACTTCGGCCGATGCATTTGCGCTGGATCGTGCGGCGCCCGAGTTTCTGGTACGGCCTGGGCTGAAGAAAGTGGCCGAATGTTTGCCCCGGTTAAAGGAAACGAAACAAATTCCGATCGTGGCGATACATTTCAATGCACCAGTGAAGCATTTAAACATAGCGGGGGTTCTGGTAAAGTTGGCTGGTGGTGAGGTGAAGAATGTGGACGTTCTTGATGAGCGGCACTGTCTGAGCGATCGGGAAATCGCCCGTGGGGCTCATGAAGCTGAAAGCACGAATACTGGAAGATA-AGGGCATCGCCGGAGGAATGGTTAATATCTGCCGGCACGAGACGGTAGAAGCGTTGGAGGAGGAACTTAGACGGATATTGCTAGAGCCAAAGGAACAAAGATGAGCAGGTTTAGGGAAAGCTAGTAGAACAATAAAACACCCAAAGGATCCTGGAGCAGTTCCCGGGTC-ACTTACCAAAAAAAA] [+] EMBL CNS09R0D [CGTTTGTTTCGAGAAAGGAAAAAGGGTGCAAAGTGCAAGATAAGACTCGAGTTGTGTAATGTTGCGTTTAATACGAATATGCGGTACAGCAGCATCAATAGCACCGAAATGGCCCCAACCAGCCTCTTCCCTCCTTCGGTACAGTACATTTTCCCCGCGGGAGTTCCACTACGAAACATCGGACGGCGAAAATGGCACACTGATGCATCGCTTCTCCCGGCACGTGTCCCACACGAAGGCGTGATTTTACCGACACAACCAAGTGCAGCTTAAAGGTGTCCAATTTCTACCCGCTGCCGGATGTGGGCACCTACGGGCAGCAGATACGCGATCTGGCAACCATCGATCTGGCCAAGCTGATCGCCTTTACGACCGATTTCCGCAGCAAAACGGATGTTCGATCGTACACGGAAGTCGTGAACGCGCTGGACGAGGAGTGTGTGCGCCGGGTCCCGAGGGCAACGACGAGCGAGCTGTTGGAAATGTTGCACTGCTTCATGTACCTGCTGCCGAACAAAATTGCCCAGCTCAAGTCGTACCAGGCGGCCATGCCGAAGCTGATCGAGCTGTTTGACGGTGCGGAAAATGAGCGAGACTTTCTGTCGATCGTTTTCTTCCTCGGCATGTGGAAGCGCAACAAAACGGGGGCGATGCTGATGAAGGAATTTCTGCAGCAACATCTGACCCGCTACCTCACACCGGACATGAGCCGGATGGATTTCGTCATACTGGCGAATGCAACGTACAAAACGAGTCTTCGAATGGTGGACGAATCGGATGCGTTTGGGAGCCGGCTAGTGAAGGAGATTGTTGAATTCGGGGATGGAGACGATTCGGCACTGCTGGTGACGCTGATAAAATGTGCCCGTATGAATC ] [+] EMBL CNS09R7S [ AAGAAAAGACCCGAGTTGTGTAATGTTGCGTTTAATACGAATATGCGGTACAGCAGCATCAATAGCACCGAAATGGCCCCAACCAGCCTCTTCCCTCCTTCGGTACAGTACATTTTCCCCGCGGGAGTTCCACTACGAAACATCGGACGGCGAAAATGGCACACTGATGCATCGCTTCTCCCGGCACGTGTCCCACACGAA GCGTG ] [+] EMBL AGA281781 [ AAAATGGCACACTGATGCATCGCTTCTCCCGGCACGTGTCCCACACGAA GCGTGATTTTACCGACACAACCAAGTGCAGCTTAAAGGTGTCCAATTTCTACCCGCTGCCGGATGTGGGCACCTACGGGCAGCAGATACGCGATCTGGCAACCGTCGATCTGGCCAAGCTGATCGCCTTTACGACTGATTTCCGCAGCAAAACGGATGTACGATCGTACACGGAAGTCGTGAACGCGCTGGACGAGGAGTGTGTGCGCCGGGTCCCGAGGGCAACGACGGGCGAGCTGTTGGAAATGTTGCACTGCTTCATGTACCTGCTGCCGAACAAAATCGCCCAGCTAAAGTCGTACCAGGCGGCCCTGCCGAAGCTGATCGAGCTGTTCGACGGTGCGGAAAATGAGCGAGACTTTCTGTCGATCGTTTTCTTCC ] [+] EMBL BX628274 [ ATCGGATGCGTTTGGGAGCCGGCTAGTGAAGGAGATTGTTGAATTCGGGGATGGAGACGATTCGGCACTGCTGGTGACGCTGATAAAATGTGCCCGTATGAATCGGCTCGCTTCCGGGGAGATAGTGGAGAAGGTGCACTCGTTCACGGAGTCCAACATCGACAGTAAGGAGCTGGATTTCCGCGGCCTTTCGCATTTGTTCGCCTACATAGCGGACAATCGGATAAAGGACGACACGCTGGCGGGCCTGTTCGTGGAAGGATGCTGGAGCCGATTCGATGCGGAGGTGAGGAAACACGGATTCGAAACACAGTCACAATCCTGCCGGCCCAAGGATATCGCAACGTTTCTGTGGAGCTGTGCCACACTCGGTGTGCCGATCGAAACATACCCCGAAGTGAAAATGAACCTACTCGAAAAGGCAATACGGCTCAAGGTGGAAGCCGGCGAGTATCGGTACAGCTCCGATTTGCTGGTCGATACGATTCTTT ] [-] EMBL CNS09R0E [ GCCGGCCCAAGGATATCGCAACGTTTCTGTGGAGCTGTGCCACACTCGGTGTGCCGATCGAAACATACCCCGAAGTGAAAATGAACCTACTCGAAAAGGCAATACGGCTCAAGGTGGAAGCCGGCGAGTATCGGTACAGCTCCGATTTGCTGGTCGATACGATTCTTTCGCTGTGGATTTGTGACCGTAAATCGATCGCCCTCTTTCGGTTGCTGTTCAAAGATAAAGCGCTGGTGCAGAACTTCGGAAGGAGCGTGCCAAGCTGGAATCGCGCAAGGATTTGCTGCTTACCTGCGCGGAAATCGATTTGCCCGATGCGTGGGACATGATTCAAATCGATACGCAAACTTCGGCCGATGCATTTGCGCTGGATCGTGCGGCGCCCGAGTTTCTGGTACGGCCTGGGCTGAAGAAAGTGGCCGAATGTTTGCCCCGGTTAAAGGAAACGAAACAAATTCCGATCG ] [-] EMBL CNS09R7T [ GTGGGACATGATT AAATCGATACGCAAACTTCGGCCGATGCATTTGCGCTGGATCGTGCGGCGCCCGAGTTTCTGGTACGGCCTGGGCTGAAGAAAGTGGCCGAATGTTTGCACCGGTTAAAGGAAACGAAACAAATTCCGATCGTGGCGATACATTTCAATGCACCAGTGAAGCATTTAAACATAGCGGGGGTTCTGGTAAAGTTGGCTGGTGGTGAGGTGAAGAATGTGGACGTTCTTGATGAGCGGCACTGTCTGAGCGATCGGGAAATCGCCCGTGGGGCTCATGAAGCTGAAAGCACGAATACTGGAAGATA AGGGCATCGCCGGAGGAATGGTTAATATCTGCCGGCACGAGACGGTAGAAGCGTTGGAGGAGGAACTTAGACGGATATTGCTAGAGCCAAAGGAACAAAGATGAGCAGGTTTAGGGAAAGCTAGTAGAACAATAAAACACCCAAAGGATCCTGGAGCAGTTCCCGGGTC ACTTACCAAA ] [-] EMBL AGA280084 [ AAATTCCGATCGTGGCGATACATTTCAATGCACCAGTGAAGCATTTAAACATAGCGGGGATTCTGGTAAAGTTGGCTGGTGGTGAGGTGAAGAATGTGGACGTTCTTGATGAGCGGCACTGTCTGAGCGATCGGG AATCGCCCGTGGGGCTCATGAAGCTGAAAGCACGAATACTGGAAGATA AGGGCATCGCCGGAGGAATGGTTAATATCTGCAGGCACGAGACGGCAGAAGCTTTGGAGGAGGAGCTTAGAAGGATATTGCTAGAGCCAAAGGAACAAAGATGAGCGAGTTTAGGGAAAGCTAGTAGAACAATAAAACACCCAAAGCATCCTGGAGCAGTTCCCGGGTCAACTTACCAAAAAAAA] [-] EMBL CNS08KCT [ ATACTGGAAGATATAGGGCATCGCCGGAGGAATGGTTAATATCTGCCGGCACGAGACGGTAGAAGCGTTGGAGGAGGAACTTAG ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||