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Anopheles gambiae
cluster # 7991 cluster # 7991       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7991#0 length = 935 sequences # 3  
consensus_7991#1 length = 864 sequences # 1  
consensus_7991#2 length = 814 sequences # 1  
consensus_7991#3 length = 660 sequences # 1  
consensus_7991#4 length = 470 sequences # 2  

consensusID : consensus_7991#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 935
fasta sequence
                              [GGCAGAATCCCCCGAGNGTTAATTTTTTTTTTTTTCCTGGAATCACAGCGTGTTTTACTTTATTGCTCTTCAAAAGTTGTCGCATCGTCGCCCGCCACACCTCGGCAGCGGGCTGCCGGTTACAAGCTAGCAACGCTATAATATGGTTGTATTATGCCTTCGAATATTATACTCTTTTCGGTTCGTTACGGGGAGGGGTGGGGTG-GGCGAA-AAGAAAAGCCGGGACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGC-GTCTC-GTCTCCTGTTCTGCCCTGCCAAC-TGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTG--TGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAA-AAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTT-TCCTT-T-CCCTTCCCCATTTTCCT-GCCACATTTCAT-CCGCAAGTGTGTGTGTGTGTCGT-ACATGT-TCGCTCGCTGT-TT-GC-GCT-TCTTCTATGCTCTATCCGG-ATAGT-TAACANACACAAACACAAGGTCACAACATACATCATCACCACTAGCTACCTGTACACATTAACACATANATAACTGCTACACTACTATCAAGCCTTCTCTCTTNTCCACACTGGACTACAACACAAACATAACANTTCAACACACAACTAANGNGGCCCACATCGNAAAACGCCGNGGGTTAAAAGANTAAGTCAATAANTAATGAACAANAAACATTCCTAAACTAACATACTTGACCTTACCACCGTAGCCCCTGGCAGCCCAGGGAGCACAGGTAGATCAACACACCCTTCTATAGGGGCTAANAGGGAAACGGN]

[+] EMBL AL930748             [GGCAGAATCCCCCGAGNGTTAATTTTTTTTTTTTTCCTGGAATCACAGCGTGTTTTACTTTATTGCTCTTCAAAAGTTGTCGCATCGTCGCCCGCCACACCTCGGCAGCGGGCTGCCGGTTACAAGCTAGCAACGCTATAATATGGTTGTATTATGCCTTCGAATATTATACTCTTTTCGGTTCGTTACGGGGAGGGGTGGGGTGNGGCGAACAAGAAAAGCCGGGACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCTGTCTCTGTCTCCTGTTCTGCCCTGCCAACTTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTG  TGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAACAAGGACTACCCCCCATACCA CCACTGCTATGGGGGTGTGCTTTATCCTTATACCCTTCCCCATTTTCCTGGNCACATTTCATACCG AAGTGTGTGTGTGTGTCGTNACANGTATCGCTCGCTGTCTTNGCAGCTATCTTCTATGCTCTATCCGGNATAGTCTAACANACACAAACACAAGGTCACAACATACATCATCACCACTAGCTACCTGTACACATTAACACATANATAACTGCTACACTACTATCAAGCCTTCTCTCTTNTCCACACTGGACTACAACACAAACATAACANTTCAACACACAACTAANGNGGCCCACATCGNAAAACGCCGNGGGTTAAAAGANTAAGTCAATAANTAATGAACAANAAACATTCCTAAACTAACATACTTGACCTTACCACCGTAGCCCCTGGCAGCCCAGGGAGCACAGGTAGATCAACACACCCTTCTATAGGGGCTAANAGGGAAACGGN]
[-] EMBL BM580093             [                                    CTGGAATCACAGCGTGTTTTACTTTATTGCTCTTCAAAAGTTGTCGCATCGTCGCCCGCCACACCTCGGCAGCGGGCTGCCGGTTACAAGCTAGCAACGCTATAATATGGTTGTATTATGCCTTCGAATATTATACTCTTTTCGGTTCGTTACGGGGAGGGGTGGGGTG GGCGAA AAGAAAAACCGGGACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGC GTCTC GTCTCCTGTTCTGCCCTGCCAAC TGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTCTGTGTGTGTGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAA AAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTT TCCTT T CCCTTCCCCATTTTCCT GCCACATTTCAT CCGCAAGTGTGTGTGTGTGTTTT    TGT TCGCTCGCTGT TT GC GCT TCTTCTATGCTCTATCCAG ATAGT TAACcgg                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX615204             [                                                                                               CACACCTCGGCAGCGGGCTGCCGGTTACAAGCTAGCAACGCTATAATATGGTTGTATTATGCCTTCGAATATTATACTCTTTTCGGTTCGTTACGGGGAGGGGTGGGGTG GGCGAA AAGAAAAGCCGGGACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGC GTCTC GTCTCCTGTTCTGCCCTGCCAAC TGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTG  TGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAA AAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTT TCCTT T CCCTTCCCCATTTTCCT GCCACATTTCAT CCGCAAGTGTGTGTGTGTGT GT TTTTGT TCGCTCGCTGT TT GC GCT TCTTCTATGCTCTATCCGG ATAGT TAACACACACAAA A AGGGTCACAA ATA AT AT AAAACTAGCT                                                                                                                                                                                                                                                                               ]


>consensus_7991#0 GGCAGAATCCCCCGAGNGTTAATTTTTTTTTTTTTCCTGGAATCACAGCGTGTTTTACTT TATTGCTCTTCAAAAGTTGTCGCATCGTCGCCCGCCACACCTCGGCAGCGGGCTGCCGGT TACAAGCTAGCAACGCTATAATATGGTTGTATTATGCCTTCGAATATTATACTCTTTTCG GTTCGTTACGGGGAGGGGTGGGGTGGGCGAAAAGAAAAGCCGGGACGGGCACCCGGTCCA CCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGT TCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAAT AGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGT CTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCC CATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACA TTTCATCCGCAAGTGTGTGTGTGTGTCGTACATGTTCGCTCGCTGTTTGCGCTTCTTCTA TGCTCTATCCGGATAGTTAACANACACAAACACAAGGTCACAACATACATCATCACCACT AGCTACCTGTACACATTAACACATANATAACTGCTACACTACTATCAAGCCTTCTCTCTT NTCCACACTGGACTACAACACAAACATAACANTTCAACACACAACTAANGNGGCCCACAT CGNAAAACGCCGNGGGTTAAAAGANTAAGTCAATAANTAATGAACAANAAACATTCCTAA ACTAACATACTTGACCTTACCACCGTAGCCCCTGGCAGCCCAGGGAGCACAGGTAGATCA ACACACCCTTCTATAGGGGCTAANAGGGAAACGGN



consensusID : consensus_7991#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 864
fasta sequence
                              [GGGGTATGGCNGTAAGGGCGTCANATTCGNATGAGCTNGTNCANACTTGGTANGGGCANTCCGTCCGCGCCCTTNTTCNCNANTNGCCCANGCTGGGCATGTCTGTGGGATTGTTNCCTCATGCCGGTATCTTNGGGNNAACGNCNACNGGGTGNTTTCNCATGCAGGAATCCNTTGTATGATCGCCGCCCANTCTGCACCTAGTCTTGTTTGTACCCCCTTCNTCTTTACGGTCGATTAATGGCGTCTGTTCGGCCCCTGCTACACATTTGCACTNTGTTTTTTTCTNTNGTTCGTTTGCTTATCTTGCGCCTGGAATCCCACGCCTGTGGTTTCCCTGTGATTCGCTCTTCCAGTGTTGTCGCCATTCGTCGCCCGCCCACACCCNCGGCANGCGGCCTGCCCGGNTTCCCATGCNAGCANCTACTAACTGTCTGCCTTGTANNTATCCCCCTTCGGATACTTATACCTCTTTTCGNTCTCGCTTACGGGGTAGGGTTGGGTGGGCGAAAAGAAAAGCCGGGACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATTCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTTAACCTCGGGCGATTCTTGCC]

[-] EMBL AL933449             [GGGGTATGGCNGTAAGGGCGTCANATTCGNATGAGCTNGTNCANACTTGGTANGGGCANTCCGTCCGCGCCCTTNTTCNCNANTNGCCCANGCTGGGCATGTCTGTGGGATTGTTNCCTCATGCCGGTATCTTNGGGNNAACGNCNACNGGGTGNTTTCNCATGCAGGAATCCNTTGTATGATCGCCGCCCANTCTGCACCTAGTCTTGTTTGTACCCCCTTCNTCTTTACGGTCGATTAATGGCGTCTGTTCGGCCCCTGCTACACATTTGCACTNTGTTTTTTTCTNTNGTTCGTTTGCTTATCTTGCGCCTGGAATCCCACGCCTGTGGTTTCCCTGTGATTCGCTCTTCCAGTGTTGTCGCCATTCGTCGCCCGCCCACACCCNCGGCANGCGGCCTGCCCGGNTTCCCATGCNAGCANCTACTAACTGTCTGCCTTGTANNTATCCCCCTTCGGATACTTATACCTCTTTTCGNTCTCGCTTACGGGGTAGGGTTGGGTGGGCGAAAAGAAAAGCCGGGACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATTCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTTAACCTCGGGCGATTCTTGCC]


>consensus_7991#1 GGGGTATGGCNGTAAGGGCGTCANATTCGNATGAGCTNGTNCANACTTGGTANGGGCANT CCGTCCGCGCCCTTNTTCNCNANTNGCCCANGCTGGGCATGTCTGTGGGATTGTTNCCTC ATGCCGGTATCTTNGGGNNAACGNCNACNGGGTGNTTTCNCATGCAGGAATCCNTTGTAT GATCGCCGCCCANTCTGCACCTAGTCTTGTTTGTACCCCCTTCNTCTTTACGGTCGATTA ATGGCGTCTGTTCGGCCCCTGCTACACATTTGCACTNTGTTTTTTTCTNTNGTTCGTTTG CTTATCTTGCGCCTGGAATCCCACGCCTGTGGTTTCCCTGTGATTCGCTCTTCCAGTGTT GTCGCCATTCGTCGCCCGCCCACACCCNCGGCANGCGGCCTGCCCGGNTTCCCATGCNAG CANCTACTAACTGTCTGCCTTGTANNTATCCCCCTTCGGATACTTATACCTCTTTTCGNT CTCGCTTACGGGGTAGGGTTGGGTGGGCGAAAAGAAAAGCCGGGACGGGCACCCGGTCCA CCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGT TCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATTCCTGGCGTCCTCGTCTAGTAAT AGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGT CTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCC CATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACA TTTTAACCTCGGGCGATTCTTGCC



consensusID : consensus_7991#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 814
fasta sequence
                              [GAGGGGTGGGGTGGNCGAAAAGAAAAGCCCGGACGGGCACCCGGTCCACCGGCCACATCNGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTCATCCGCAAGTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGCGCTTCTTCTATGCTCTATCCGGATAGTTAACACACACAAAAAAGGTCACAAATAATATAAAACTAGCTACCTGTAACATAAACATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTAGCTGGACTAGAAAAAATAAATAAAAAATAGGCCACATCAAACCGCGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCCTACACGTGCCTGCGCCCAGGACACGTGTTTACACCCTTTTGGCTTTGGTTTCGTTCTACGATGGTGTGAGTGTGTGTGTGTCTTGATTTTGGATGGAACCACACCACACCGTATGGCAAGCGTGTGTCAAATCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATGTTTGCCTCCAAACCAAAAAGCCTTGACCGGTTCG]

[-] EMBL BX625922             [GAGGGGTGGGGTGGNCGAAAAGAAAAGCCCGGACGGGCACCCGGTCCACCGGCCACATCNGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTCATCCGCAAGTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGCGCTTCTTCTATGCTCTATCCGGATAGTTAACACACACAAAAAAGGTCACAAATAATATAAAACTAGCTACCTGTAACATAAACATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTAGCTGGACTAGAAAAAATAAATAAAAAATAGGCCACATCAAACCGCGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCCTACACGTGCCTGCGCCCAGGACACGTGTTTACACCCTTTTGGCTTTGGTTTCGTTCTACGATGGTGTGAGTGTGTGTGTGTCTTGATTTTGGATGGAACCACACCACACCGTATGGCAAGCGTGTGTCAAATCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATGTTTGCCTCCAAACCAAAAAGCCTTGACCGGTTCG]


>consensus_7991#2 GAGGGGTGGGGTGGNCGAAAAGAAAAGCCCGGACGGGCACCCGGTCCACCGGCCACATCN GACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCA ACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTT TCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACTGTCTAATATGGCGT CTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCAC TGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTCATCCGCAA GTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGCGCTTCTTCTATGCTCTATCCGGA TAGTTAACACACACAAAAAAGGTCACAAATAATATAAAACTAGCTACCTGTAACATAAAC ATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTAGCTGGACTAGAAAAAATAAATAA AAAATAGGCCACATCAAACCGCGTAAAATAATAATAATAAAAAAAACATTCTAAATAATA ATGACCCTACACGTGCCTGCGCCCAGGACACGTGTTTACACCCTTTTGGCTTTGGTTTCG TTCTACGATGGTGTGAGTGTGTGTGTGTCTTGATTTTGGATGGAACCACACCACACCGTA TGGCAAGCGTGTGTCAAATCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATG TTTGCCTCCAAACCAAAAAGCCTTGACCGGTTCG



consensusID : consensus_7991#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 660
fasta sequence
                              [GGTGGGCGAAAAGAAAAAAGCCGGCACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGTGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTCATCCGCAAGTGTGTGTGTCAAATCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATGTTTGACTCCAAACCAAAAAGCCTTGACCGGTTCGTTTGTTTTTTTTTTTCATCGGCGCTTAAATTTAGAATGGCATAGCTGCTCGGGGCGCGTACACAATACCACACACATACGCGCGCGCTTGTGTGTGTAACCGATCAAAAGGGGAGCGCAAAAGAAAAGTAAAAAAAATATATATATACGCGCACCCACACACACACACGCAATTCTAAGTATTAGAAAAATAAAATCCTAAACTCCGTGCGCAGCGG]

[-] EMBL BM634768             [GGTGGGCGAAAAGAAAAAAGCCGGCACGGGCACCCGGTCCACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGTGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTCATCCGCAAGTGTGTGTGTCAAATCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATGTTTGACTCCAAACCAAAAAGCCTTGACCGGTTCGTTTGTTTTTTTTTTTCATCGGCGCTTAAATTTAGAATGGCATAGCTGCTCGGGGCGCGTACACAATACCACACACATACGCGCGCGCTTGTGTGTGTAACCGATCAAAAGGGGAGCGCAAAAGAAAAGTAAAAAAAATATATATATACGCGCACCCACACACACACACGCAATTCTAAGTATTAGAAAAATAAAATCCTAAACTCCGTGCGCAGCGG]


>consensus_7991#3 GGTGGGCGAAAAGAAAAAAGCCGGCACGGGCACCCGGTCCACCGGCCACATCCGACCGCG CACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCTGTTCTGCCCTGCCAACTGTGC CCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTAATAGTTAAGTCTTTTCAAGTT CGGCGTACATGTGTGTGTGTGTGTCTCTCTGTGTGTACTGTCTAATATGGCGTCTAACAG GAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCCCCCATACCACCCACTGCTATG GGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCACATTTCATCCGCAAGTGTGTG TGTCAAATCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATGTTTGACTCCAA ACCAAAAAGCCTTGACCGGTTCGTTTGTTTTTTTTTTTCATCGGCGCTTAAATTTAGAAT GGCATAGCTGCTCGGGGCGCGTACACAATACCACACACATACGCGCGCGCTTGTGTGTGT AACCGATCAAAAGGGGAGCGCAAAAGAAAAGTAAAAAAAATATATATATACGCGCACCCA CACACACACACGCAATTCTAAGTATTAGAAAAATAAAATCCTAAACTCCGTGCGCAGCGG



consensusID : consensus_7991#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 470
fasta sequence
                              [GTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACC-CCCCATACCACCCACTGCTATGGGGGTGTGCTT-TTCCTTTCCCTTCCC--CATTTTCCTGCCACATTTCATCCGCAAGTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGCGCTTCTTCTATGCTCTATCCGGATAGTTAACACACACAAAAAAGGTCACAA-ATAATATAAAACTAGCTACCTGTAACATAAACATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTAGCTGGACTAGAAAAAATAAATAAAAAATAGGCCACATCAAACCGCGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCCTACA-CGTGCCTGCGCCCAGGACACGTG-TTACACCCTTT--GCTTT-GTTTCGTTCTACCGAT-GTGT---AACCTC--GGGATTCTTGC]

[-] EMBL AL694320             [GTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACC CCCCATACCACCCACTGCTATGGGGGTGTGCTT TTCCTTTCCCTTCCC  CATTTTCCTGCCACATTTCATCCGCAAGTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGCGCTTCTTCTATGCTCTATCCGGATAGTTAACACACACAAAAAAGGTCACAA ATAATATAAAACTAGCTACCTGTAACATAAACATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTAGCTGGACTAGAAAAAATAAATAAAAAATAGGCCACATCAAACCGCGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCCTACA CGTGCCTGCGCCCAGGACACGTG TTACACCCTTT  GCTTT GTTTCGTTCTACCGAT GTGT   AACCTC  GGGAT      ]
[-] EMBL AL694687             [                                   ATCCGGGGAAAACGCTGCTGAAAAAGGACTACCTCCCCATACCACCCACTGCTATGGGGGTGTGCTTGTTCCTTTCCCTTNCCGNCANNGTCCTGCCACANGTCATCCGCAAGTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGCGCTTCTTCTATGCTCTATCCGGATAGTTAACACACAGCAAAAAGGTCACAAGATAATATAAAACTAGCTACCTGTAACATAAACATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTAGCTGGACTAGAAAAAATAAATAAAAAATAGGCCACATCAAACCGCGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCCTACAGCGTGCCTGCGCCCAGGACACGTGTTTACACCCTTTTGGCTTTGGTTTCGTTCTA CGATGGTGTGAAAACCTCGNGGGATTCTTGC]


>consensus_7991#4 GTGTGTACTGTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAA GGACTACCCCCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATT TTCCTGCCACATTTCATCCGCAAGTGTGTGTGTGTGTGTTTTTGTTCGCTCGCTGTTTGC GCTTCTTCTATGCTCTATCCGGATAGTTAACACACACAAAAAAGGTCACAAATAATATAA AACTAGCTACCTGTAACATAAACATAATAATGCTACACTACTTAAGCCTTCTCTCTTTTA GCTGGACTAGAAAAAATAAATAAAAAATAGGCCACATCAAACCGCGTAAAATAATAATAA TAAAAAAAACATTCTAAATAATAATGACCCTACACGTGCCTGCGCCCAGGACACGTGTTA CACCCTTTGCTTTGTTTCGTTCTACCGATGTGTAACCTCGGGATTCTTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7991#1      GGGGTATGGCNGTAAGGGCGTCANATTCGNATGAGCTNGTNCANACTTGGTANGGGCANT 60
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      ------------------------------------------------------------
                                                                                  

consensus_7991#1      CCGTCCGCGCCCTTNTTCNCNANTNGCCCANGCTGGGCATGTCTGTGGGATTGTTNCCTC 120
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      ------------------------------------------------------------
                                                                                  

consensus_7991#1      ATGCCGGTATCTTNGGGNNAACGNCNACNGGGTGNTTTCNCATGCAGGAATCCNTTGTAT 180
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      ------------------------------------------------------------
                                                                                  

consensus_7991#1      GATCGCCGCCCANTCTGCACCTAGTCTTGTTTGTACCCCCTTCNTCTTTACGGTCGATTA 240
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      ------------------------------------------------------------
                                                                                  

consensus_7991#1      ATGGCGTCTGTTCGGCCCCTGCTACACATTTGCACTNTGTTTTTTTCTNTNGTTCGTTTG 300
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      ------------------------------------------------------------
                                                                                  

consensus_7991#1      CTTATCTTGCGCCTGGAATCCCACGCCTGTGGTTTCCCTGTGATTCGCTCTTCCAGTGTT 360
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      GGCAGAATCCCCCGAGNGTTAATTTTTTTTTTTTTCCTGGAATCACAGCGTGTTTTACTT 60
                                                                                  

consensus_7991#1      GTCGCCATTCGTCGCCCGCCCACACCCNCGGCANGCGGCCTGCCCGGNTTCCCATGCNAG 420
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      TATTGCTCTTCAAAAGTTGTCGCATCGTCGCCCGCCACACCTCGGCAGCGGGCTGCCGGT 120
                                                                                  

consensus_7991#1      CANCTACTAACTGTCTGCCTTGTANNTATCCCCCTTCGGATACTTATACCTCTTTTCGNT 480
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      ------------------------------------------------------------
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      TACAAGCTAGCAACGCTATAATATGGTTGTATTATGCCTTCGAATATTATACTCTTTTCG 180
                                                                                  

consensus_7991#1      CTCGCTTACGGGGTAGGGTTGGGTGGGCGAAAAGAAAA--GCCGGGACGGGCACCCGGTC 538
consensus_7991#3      ---------------------GGTGGGCGAAAAGAAAAAAGCCGGCACGGGCACCCGGTC 39
consensus_7991#2      ------------GAGGGGTGGGGTGGNCGAAAAGAAAA--GCCCGGACGGGCACCCGGTC 46
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      GTTCGTTACGGGGAGGGGTGGGGTGGGCGAAAAGAAAA--GCCGGGACGGGCACCCGGTC 238
                                                                                  

consensus_7991#1      CACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCT 598
consensus_7991#3      CACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCT 99
consensus_7991#2      CACCGGCCACATCNGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCT 106
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      CACCGGCCACATCCGACCGCGCACGGTGGGTATCATTCTGTGGTGAGCGTCTCGTCTCCT 298
                                                                                  

consensus_7991#1      GTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATTCCTGGCGTCCTCGTCTAGTA 658
consensus_7991#3      GTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTA 159
consensus_7991#2      GTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTA 166
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      GTTCTGCCCTGCCAACTGTGCCCATCTGTGCAGGAATATCCCTGGCGTCCTCGTCTAGTA 358
                                                                                  

consensus_7991#1      ATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACT 718
consensus_7991#3      ATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGTGTCTCTCTGTGTGTACT 219
consensus_7991#2      ATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACT 226
consensus_7991#4      ---------------------------------------------------GTGTGTACT 9
consensus_7991#0      ATAGTTAAGTCTTTTCAAGTTCGGCGTACATGTGTGTGTGTGCGTCTCTCTGTGTGTACT 418
                                                                         *********

consensus_7991#1      GTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCC 778
consensus_7991#3      GTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCC 279
consensus_7991#2      GTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCC 286
consensus_7991#4      GTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCC 69
consensus_7991#0      GTCTAATATGGCGTCTAACAGGAAATATCCGGGGAAAACGCTGCTGAAAAAGGACTACCC 478
                      ************************************************************

consensus_7991#1      CCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCA 838
consensus_7991#3      CCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCA 339
consensus_7991#2      CCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCA 346
consensus_7991#4      CCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCA 129
consensus_7991#0      CCCATACCACCCACTGCTATGGGGGTGTGCTTTTCCTTTCCCTTCCCCATTTTCCTGCCA 538
                      ************************************************************

consensus_7991#1      CATTTTAACCTCGGGCGA-TTCTTGCC--------------------------------- 864
consensus_7991#3      CATTTCATCCGCAAGTG--TGTGTGTCA-AATCAAACCTGAAGGAAGTGAAAGTACGGAT 396
consensus_7991#2      CATTTCATCCGCAAGTGTGTGTGTGTGT-GTTTTTGTTCGCTCGCTGTTTGCGCTTCTTC 405
consensus_7991#4      CATTTCATCCGCAAGTGTGTGTGTGTGT-GTTTTTGTTCGCTCGCTGTTTGCGCTTCTTC 188
consensus_7991#0      CATTTCATCCGCAAGTGTGTGTGTGTGTCGTACATGTTCGCTCGCTGTTTGCGCTTCTTC 598
                      ***** * ** *  * *  *   **                                   

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      GAAACTAAAAATGTTTGACTCCAAACCAAAAAGCCTTGACCGGTTCGTTTGTTTTTTTTT 456
consensus_7991#2      TATGCTCTATCCGGATAGTTAACACACACAAAAA--AGGTCACAAATAATATAAA----A 459
consensus_7991#4      TATGCTCTATCCGGATAGTTAACACACACAAAAA--AGGTCACAAATAATATAAA----A 242
consensus_7991#0      TATGCTCTATCCGGATAGTTAACANACACAAACACAAGGTCACAACATACATCATCACCA 658
                                                                                  

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      TTCATCGGCGCTTAAATTTAGAATGGCATAGCTGCTCGGGGCGCGTACACAATACCACAC 516
consensus_7991#2      CTAGCTACCTGTA-ACATAAACATA---ATAA-TGCTACACTACT--TAAGCCTTCTCTC 512
consensus_7991#4      CTAGCTACCTGTA-ACATAAACATA---ATAA-TGCTACACTACT--TAAGCCTTCTCTC 295
consensus_7991#0      CTAGCTACCTGTACACATTAACACATANATAACTGCTACACTACTATCAAGCCTTCTCTC 718
                                                                                  

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      ACATACGCGCGCGCTTGTGTGTGTAACCGATCAAAAGGGGAGCGCAAAAGAAAAGTAAAA 576
consensus_7991#2      TTTTA---GCTGGACTAGAAAAAATAAATAAAAAATAGGC-CACATCAAACCG------- 561
consensus_7991#4      TTTTA---GCTGGACTAGAAAAAATAAATAAAAAATAGGC-CACATCAAACCG------- 344
consensus_7991#0      TTNTCCACACTGGACTACAACACAAACATAACANTTCAACACACAACTAANGNGGCCCAC 778
                                                                                  

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      AAAATATATATATACGCGCACCCACACACACACACGCAATTCTAAGTATTAGAAAAATAA 636
consensus_7991#2      --CGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCC-TACACGTGCCT 618
consensus_7991#4      --CGTAAAATAATAATAATAAAAAAAACATTCTAAATAATAATGACCC-TACACGTGCCT 401
consensus_7991#0      ATCGNAAAACGCCGNGGGTTAAAAGANTAAGTCAATAANTAATGAACAANAAACATTCCT 838
                                                                                  

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      AATCCTAAACTCCGTGCGCAGCGG------------------------------------ 660
consensus_7991#2      GCGCCCAGGACACGTGTTTACACCCTTTTGGCTTTGGTTTCGTTCTACGATGGTGTGAGT 678
consensus_7991#4      GCGCCCAGGACACGTGTT-ACACCCTTT--GCTTTG-TTTCGTTCTAC--CGATGTGTAA 455
consensus_7991#0      AAACT-AACATACTTGACCTTACCACCGTAGCCCCT-GGCAGCCCAGGGAGCACAGGTAG 896
                                                                                  

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      GTGTGTGTGTCTTGATTTTGGATGGAACCACACCACACCGTATGGCAAGCGTGTGTCAAA 738
consensus_7991#4      CCTCGGGATTCTTGC--------------------------------------------- 470
consensus_7991#0      ATCAACACACCCTTCTATAGGGGCTAANAGGGAAACGGN--------------------- 935
                                                                                  

consensus_7991#1      ------------------------------------------------------------
consensus_7991#3      ------------------------------------------------------------
consensus_7991#2      TCAAACCTGAAGGAAGTGAAAGTACGGATGAAACTAAAAATGTTTGCCTCCAAACCAAAA 798
consensus_7991#4      ------------------------------------------------------------
consensus_7991#0      ------------------------------------------------------------
                                                                                  

consensus_7991#1      ----------------
consensus_7991#3      ----------------
consensus_7991#2      AGCCTTGACCGGTTCG 814
consensus_7991#4      ----------------
consensus_7991#0      ----------------
                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)