Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7999 cluster # 7999       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7999#0 length = 1685 sequences # 8  

consensusID : consensus_7999#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1685
fasta sequence
                              [GGCAAGCTCGGNGCAAGGTGGAAATTGATTGTTT-GCGTTGGCAGGTTGCGGGCGGATAGTGAAAGATAAATAGAAACGCAGCGAGCGCACGAAGGGCTGAAAATTTACGCATCAAGCGACAAACACCGGACGGGCACGGTTGTACCCCGCGTATCACACACATCCCTCGGGAGCGAGTAATGACGTAAATAATGCGCCGATAGAGTGTTTGGGACTGGGAAACGATCAATCGCGGACACCATAAGTGCATCCAAGTAGTGCAAATTGCAAGATGAATCTGGCCGAATGCAATCCGTACGGCAATGGTTTGCTGTACGCAGGGTTCAACCAGGATCAGGGTTGTTTCGCCTGCGCCACCGACAGTGGCTTTCGCGTGTACAACAGTGATCCGCTGAAGGAGAAGGAGCGTCAAATCTTCACCGATGGGGGGGTCGCCCACGTCGAGATGCTGTTCCGCTGCAAC-TATCTCGCCCTCGTCGGGGGTGGCTTGCGGCCAC-TCTATCCG-CCGAACAAA-GTGCTCGT-CT--GGGACGATC-TGAAGAA---GGCGCCC-GC--AATCTCGC-TCGA--CTTT-AAC-GCCCCCG-TGAAGGGGG--TGC-GGC-TGC-GGC---GGGACCGAATCGTGGTGGTGCTGGAAGGCATCATCAAGGTGTACGCCTTCACGCAAACGCCGACCCAGCTGCACGTGTTCGAAACGTCCAAAAACCCGCAGGCCTGTGTGTGCTCTGCCCGAACAGCACCAAATCGCTGCTCGCCTTTCCGGGGCGCCGTACCGGGCACGTGCAGATCGTCGATCTGGCCAACACAGAGAAGGCGCCGCACGAGATTATTGCGCACGAGACGGCCATCAGCTGTATTGCGCTGAACCTGCAGGGCACCCGGTTGGCGACGGCCAGCGATCGGGGCACGCTGATACGCATTTTCGACACCGGGAGCGGTGCGAAGGTGGCCGAGCTGCGACGCGGCTCGAATCAGGCCAAAATTTATTGCATCAACTTCAATCATCAGTCGACGTCGGTGGTGGTGTCGTCGGATCACGGCACAATCCACGTGTTTAATCTGGAAGAGCCGAACAGGGGCCGCGATGGCGGCTCGTCCGGTGGCGGCGGCGGTGGCTCGAGCTTGCTGACGCGCTACTTCACCAGCCAGTGGTCGTTCTGCAAATTTTCCATCCCCCAAGGACCACCTTGCATATGCGCGTTTGGATCTGAGAACAATTCGGTGATTGTGATATGTGCGGACGGACATTACTACAAGTTTGTGTACAACAGCAAGGGCGAATGCTCGCGGGAAGTTTGTACCCAGTTTCTCGAAATGTCCGACGACCAGACGTAAAGCCGTGCGGCGAGCTGAATCGACGGATCAACTGGCTACCAGGGAGTTTGAAAAACATTGGGTAGACCGAGAGACTGCAGCGGGAGCGCTACGAACGTGGAAGGGAAGGCCACGGCGATTATATATTTACGTACGGATATGATTCTCTGGGGCATTTGGGGAGGGCGACACAAAGGAACAGTCAACAGAAACCAACAATCGGCTTGAAGCGTAGGGTATTTGAGGACGAGCGCAGCGGTAGGGGAGAGCATATTGCCTACAGAACTATTTAATAGCGACGAACAAGATGTACCACGCGGAGGAAAAGCTATGCTAAGTTAATTAAAATACATTTACACATGTTTTCATTCATCCGTTAAAAAAAA]

[+] EMBL BX468996             [GGCAAGCTCGGNGCAAGGTGGAAATTGATTGTTTCGCGTTGGCAGGTTGCGGGCGGATAGTGAAAGATAAATAGAAACGCAGCGAGCGCACGAAGGGCTGAAAATTTACGCATCAAGCGACAAACACCGGACGGGCACGGTTGTACCCCGCGTATCACACACATCCCTCGGGAGCGAGTAATGACGTAAATAATGCGCCGATAGAGTGTTTGGGACTGGGAAACGATCAATCGCGGACACCATAAGTGCATCCAAGTAGTGCAAATTGCAAGATGAATCTGGCCGAATGCAATCCGTACGGCAATGGTTTGCTGTACGCAGGTTTCAACCAGGATCAGGGTTGTTTCGCCTGCGCCACCGACAGTGGCTTTCGCGTGTACAACAGTGATCCGCTGAAGGAGAAGGAGCGTCAAATCTTCAGCGATGGGGGGGTCGCCCACGTAGAGATGCTGTTCCGGTGCAACGTATCTCGCCCTCGTCGGGGGTGGCTTGCGG CACGTCTATCCGTCCGAACAAAGGTGCTCGTCCTGGGGGACGATCTTGAAGAACAGGGCGCCCGGCANAATCTCGCTTCGACGCTTTAAACGGCCCCCGTTGAAGGGGGGTTACAGGCTTGCAGGCNAGGGGACCGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM587951             [                   ccgAATTGATTGTTT GCGTTGGCAGGTTGCGGGCGGATAGTGAAAGATAAATAGAAACGCAGCGAGCGCACGAAGGGCTGAAAATTTACGCATCAAGCGACAAACACCGGACGGGCACGGTTGTACCCCGCGTATCACACACATCCCTCGGGAGCGAGTAATGACGTAAATAATGCGCCGATAGAGTGTTTGGGACTGGGAAACGATCAATCGCGGACACCATAAGTGCATCCAAGTATTGCAAATTGCAAGATGAATCTGGCCGAATGCAATCCGTACGGCAATGGTTTGCTGTACGCAGGGTTCAACCAGGATCAGGGTTGTTTCGCCTGCGCCACCGACAGTGGCTTTCGCGTGTACAACAGTGATCCGCTGAAGGAGAAGGAGCGTCAAATCTTCACCGATGGGGGGGTCGCCCACGTCGAGATGCTGTTTCGCTGCAAC TATCTCGCCCTCGTAGGGGGTGGCTTGCGGCCAC TCTATCCG CCGAACAAA GTGCTCGT CT  GGGACGATC TGAAGAA   GGCGCCC GC  AATCTCGC TCGA  CTTT AAC GCCCCCG TGAAGGGGG  TGC GGC TGC GGC   GGGACCGAATCGTGGTGGTGCTGGAAGGCATCATCAAGGTGTACGCCTTCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AGA281772            [                                                                    AAATAGAAACGCAGCGAGCGCACGAAGGGCTGAAAATTTACGCATCAAGCGACAAACACCGGAC CGCACGGTTGTACCCCGCGTATCACACACATCCCTCGGGAGCGAGTAATGACGTAAATAATGCGCCGATAGAGTGTTTGGGACTGGGAAACGATCAATCGCGGACACCATAAGTGCATCCAAGTAGTGCAAATTGCAAGATGAATCTGGCCGAATGCAATCCGTACGGCAATGGTTTGCTGTACGCAGGGTTCAATCAGGATCAGGGTTGTTTCGCCTGCGCCACCGACAGTGGCTTTCGCGTGTACAACAGTGATCCGCTGAAGGAGAAGGAGCGTCAAATCTTCACCGATGGGGGGGTCGCCCACGTCGAGATGCTGTTCCGCTGCAAC TATCTCGCCCTCGTCGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08LJR             [                                                                                                                                      GCACGGTTGTACCCCGCGTATCACACACATCCCTCGGGAGCGAGTAATGACGTAAATAATGCGCCGATAGAGTGTTTGGGACTGGGAAACGATCAATCGCGGACACCATAAGTGCATCCAAGTATTGCAAATTGCAAGATGAATCTGGCCGAATGCAATCCGTACGGCAATGGTTTGCTGTACGCAGGGTTCAACCAGGATCAGGGTTGTTTCGCCTGCGCCACCGACAGTGGCTTTCGCGTGTACAACAGTGATCCGCTGAAGGAGAAGGAGCGTCAAATCTTCACCGATGGGGGGGTCGCCCACGTCGAGATGCTGTTTCGCTGCAAC TATCTCGCCCTCGTAGGGGGTGGCTTGCGGCCAC TCTATCCG CCGAACAAA GTGCTCGT CT  GGGACGATC TGAAGAA   GGCGCCC GC  AATCTCGC TCGA  CTTT AAC GCCCCCG TGAAGGGGG  TGC GGC TGC GGC   GGGACCGAATCGTGGTGGTGCTGGAAGGCATCATCAAGGTGTACGCCTTCACGCAAACGCCGACCCAGCTGCACGTGTTCGAAACGTCCAAAAACCCGCAGGCCTGTGTGTGCTCTGCCCGAACAGCACCAAATCGCTGCTCGCCTTTCCGGGGCGCCGTACCGGGCACGTGCAGATCGTCGATCTGGCCAACACAGAGAAGGCGCCGCACGAGATTATTGCGCACGAGACGGCCATCAGCTGTATTGCGCTGAACCTGCAGGGCACCCGGTTGGCGACGGCCAGCGATCGGGGCACGCTGATACGCATTTTCGACACCGGGAGCGGTGCGAAGGTGGCCGAGCTGCGACGCGGCTCGAATCAGGCCAAAATTTATTGCATCAACTTCAATCATCAGTCGACGTCGGTGGTGGTGTCGTCGGATCACGGCACAATCCACGTGTTTAATCTGGAAGAGCCGAACAGGGGCCGCGATGGCGGCTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM627719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgCGCCTTTCCGGGGCGCCGTACCGGGCACGTGCAGATCGTCGATCTGGCCAACACAGAGAAGGCGCCGCACGAGATTATTGCGCACGAGACGGCCATCAGCTGTATTGCGCTGAACCTGCAGGGCACCCGGTTGGCGACGGCCAGCGATCGGGGCACGCTGATACGCATTTTCGACACCGGGAGCGGTGCGAAGGTGGCCGAGCTGCGACGCGGCTCGAATCAGGCCAAAATTTATTGCATCAACTTCAATCATCAGTCGACGTCGGTGGTGGTGTCGTCGGATCACGGCACAATCCACGTGTTTAATCTGGAAGAGCCGAACAGGGGCCGCGATGGCGGCTCGTCCGGTGGCGGCGGCGGTGGCTCGAGCTTGCTGACGCGCTACTTCACCAGCCAGTGGTCGTTCTGCAAATTTTCCATCCCCCAAGGACCACCTTGCACATGCGCGTTTGGATCTGAGAACAATTCGGTGATTGTGATATGTGCGGACGGACATTACTACAAGTTTGTGTACAACAGCAAGGGCGAATGCTCGCGGGAAGTTTGTACCCAGTTTCTCGAAATGTCCGACGACCAGACGTAAA                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08LJS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGATCGTCGTTCTGGCCAAAACAGAGAAGGCGCCGCACGAGATTATTGCGCACGAAACGGCCTTCAGCTGTATTGCGCTGAACCTGCAGGGCACCCGGTTGGCGACGGCCAGCGATCGGGGCACGCTGATACGCATTTTCGACACCGGGAGCGGTGCGAAGGTGGCCGAGCTGCGACGCGGCTCGAATCAGGCCAAAATTTATTGCATCAACTTCAATCATCAGTCGACGTCGGTGGTGGTGTCGTCGGATCACGGCACAATCCACGTGTTTAATCTGGAAGAGCCGAACAGGGGCCGCGATGGCGGCTCGTCCGGTGGCGGCGGCGGTGGCTCGAGCTTTGTGACGCGCTACTTCACCAGCCAGTGGTCGTTCTGCAAATTTTCCATCCCCCAAGGACCACCTTGCATATGCGCGTTTGGATCTGAGAACAATTCGGTGATTGTGATATGTGCGGACGGACATTACTACAAGTTTGTGTACAACAGCAAGGGCGAATGCTCGCGGGAAGTTTGTACCCAGTTTCTCGAAATGTCCGACGACCAGACGTAAAGCCGTGCGGCGAGCTGAATCGACGGATCAACTGGCTACCAGGGAGTTTGAAAAACATTGGGTAGACCGAGAGACTGCAGCGGGAGCGCTACGAACGTGGAAGGGAAGGCCACGGCGATTATATATTTACGTACGGATATGATTCTCTGGGGCATTTGGGGAGGGCGACACAAAGGAACAGTCAACAGAAACCAACAATCGGCTTGAAGCGTAGGGTATTTGAGGACGAGCGCAGCGGTAGGGGAGAGCATATTGCCTACAGAACTATTTAATAGCGACGAACAAGATGTACCACGCGGAGGAAAAGCTATGCTAAGTTAATTAAAATACATTTA                              ]
[+] EMBL BX626942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGCATCAACTTCAATCATCAGTCGACGTCGGTGGTGGTGTCGTCGGATCACGGCACAATCCACGTGTTTAATCTGGAAGAGCCGAACAGGGGCCGCGATGGCGGCTCGTCCGGTGGCGGCGGCGGTGGCTCGAGCTTGCTGACGCGCTACTTCACCAGCCAGTGGTCGTTCTGCAAATTTTCCATCCCCCAAGGACCACCTTGCATATGCGCGTTTGGATCTGAGAACAATTCGGTGATTGTGATATGTGCGGACGGACATTACTACAAGTTTGTGTACAACAGCAAGGGCGAATGCTCGCGGGAAGTTTGTACCCAGTTTCTCGAAATGTCCGACGACCAGACGTAAAGCCGTGCGGCGAGCTGAATCGACGGATCGACTGGCTACCAGGGAGTTTGAAAAACATTGGGTAGACCGAGAGACTGCAGCGGGAGCGCTACGAA                                                                                                                                                                                                                                                                              ]
[-] EMBL AGA280075            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gaAAAAACATTGGGTAGACCGAGAGACTGCAGCGGGAGCGCTACGAACGTGGCAGGGAAGGCCACGGCGGTTATATATTTACGTACGGATATGATTCTCTGGGGCATTTGGGGAGGGCGACACAAAGAAACAGTCAACAGAAACTAACAATCGGCTTGAAGCGTAGGGTATTTGAGGACTAGCGCAGCGGTAGGGGAGAGCATATTGCCTACAGAACTATTTAATAGCGACGAACAAGATGTACCACGCGGAGAAAAAGCTATGCTAAGTTAATTAAAATACATTTACACATGTTTTCATTCATCCGTTAAAAAAAA]


>consensus_7999#0 GGCAAGCTCGGNGCAAGGTGGAAATTGATTGTTTGCGTTGGCAGGTTGCGGGCGGATAGT GAAAGATAAATAGAAACGCAGCGAGCGCACGAAGGGCTGAAAATTTACGCATCAAGCGAC AAACACCGGACGGGCACGGTTGTACCCCGCGTATCACACACATCCCTCGGGAGCGAGTAA TGACGTAAATAATGCGCCGATAGAGTGTTTGGGACTGGGAAACGATCAATCGCGGACACC ATAAGTGCATCCAAGTAGTGCAAATTGCAAGATGAATCTGGCCGAATGCAATCCGTACGG CAATGGTTTGCTGTACGCAGGGTTCAACCAGGATCAGGGTTGTTTCGCCTGCGCCACCGA CAGTGGCTTTCGCGTGTACAACAGTGATCCGCTGAAGGAGAAGGAGCGTCAAATCTTCAC CGATGGGGGGGTCGCCCACGTCGAGATGCTGTTCCGCTGCAACTATCTCGCCCTCGTCGG GGGTGGCTTGCGGCCACTCTATCCGCCGAACAAAGTGCTCGTCTGGGACGATCTGAAGAA GGCGCCCGCAATCTCGCTCGACTTTAACGCCCCCGTGAAGGGGGTGCGGCTGCGGCGGGA CCGAATCGTGGTGGTGCTGGAAGGCATCATCAAGGTGTACGCCTTCACGCAAACGCCGAC CCAGCTGCACGTGTTCGAAACGTCCAAAAACCCGCAGGCCTGTGTGTGCTCTGCCCGAAC AGCACCAAATCGCTGCTCGCCTTTCCGGGGCGCCGTACCGGGCACGTGCAGATCGTCGAT CTGGCCAACACAGAGAAGGCGCCGCACGAGATTATTGCGCACGAGACGGCCATCAGCTGT ATTGCGCTGAACCTGCAGGGCACCCGGTTGGCGACGGCCAGCGATCGGGGCACGCTGATA CGCATTTTCGACACCGGGAGCGGTGCGAAGGTGGCCGAGCTGCGACGCGGCTCGAATCAG GCCAAAATTTATTGCATCAACTTCAATCATCAGTCGACGTCGGTGGTGGTGTCGTCGGAT CACGGCACAATCCACGTGTTTAATCTGGAAGAGCCGAACAGGGGCCGCGATGGCGGCTCG TCCGGTGGCGGCGGCGGTGGCTCGAGCTTGCTGACGCGCTACTTCACCAGCCAGTGGTCG TTCTGCAAATTTTCCATCCCCCAAGGACCACCTTGCATATGCGCGTTTGGATCTGAGAAC AATTCGGTGATTGTGATATGTGCGGACGGACATTACTACAAGTTTGTGTACAACAGCAAG GGCGAATGCTCGCGGGAAGTTTGTACCCAGTTTCTCGAAATGTCCGACGACCAGACGTAA AGCCGTGCGGCGAGCTGAATCGACGGATCAACTGGCTACCAGGGAGTTTGAAAAACATTG GGTAGACCGAGAGACTGCAGCGGGAGCGCTACGAACGTGGAAGGGAAGGCCACGGCGATT ATATATTTACGTACGGATATGATTCTCTGGGGCATTTGGGGAGGGCGACACAAAGGAACA GTCAACAGAAACCAACAATCGGCTTGAAGCGTAGGGTATTTGAGGACGAGCGCAGCGGTA GGGGAGAGCATATTGCCTACAGAACTATTTAATAGCGACGAACAAGATGTACCACGCGGA GGAAAAGCTATGCTAAGTTAATTAAAATACATTTACACATGTTTTCATTCATCCGTTAAA AAAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)