cluster # 8004

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Anopheles gambiae
cluster # 8004 cluster # 8004 Sequences # 8 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8004#0 length = 1550 sequences # 4
consensus_8004#1 length = 984 sequences # 1

consensus_8004#2 length = 595 sequences # 1
consensus_8004#3 length = 567 sequences # 1
consensus_8004#4 length = 370 sequences # 1

consensusID : consensus_8004#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1550
fasta sequence

                              [CCGCCGACCGGCTAGTGTTTTGAGAGGTCACACTCGATATAAGCCCATAACGGTGAACAGACAGACGGGAGGTTCGTTCGTGCACTTGAACGAGACATAAAACACCCAAAAGGACATATAAACGATTGCATCTCGCCGCGTACCCTTTATCGCAACGCACGCGCGTGTGTGTGTGAATCGGTTTTAGATTGAAAGCACTTCCGGCACCATAAAGCGTGTGCGAACTGTAGTCAACCGCTGTACCGAGAGAGAGAGAGAAAGATCGTGCAAAAACACTTTTTCCATCGCCGGTAGTCATCCAAGGTGGTCGACTTGGCATCCGTCAGCGAACCGCGCCGTAGTAGTTGTAGCGAGGGCAGTTCCACTGCTCCACCAGACGACGAACGTACAGTGCCGCCCAGTGGCGAAGGAATCGCCAGCAGTGACACCAGCAGTGTTGTGTGTGGTGAGTTGGTGCGTGAACAAAACGCCTGCCAGGAAGCACAGGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAAGAAGGAGCCTTACTCGATCGAATCCACAAGATGACGGACGTAGCACACGAGCTTGGCGCACTTCGATTGATCGTGGACTCTCCACTGTCGTCGAAGGTGGCCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGCAAGAAGGCCAACATCCAGGTGTACCAGGAAATGCTCGAAGAAGAACCCCGACATCAAGATGATCTACTTTGGCGAACTGTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTTGCTGCGCGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGACGACCACGTGCCGGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACCTTAGGAATGCTAGAACCTATAGTAGCAGTAAGCGCGTGTCGTCAAGTCGTCAGCTCTCGTCGTCAGCCGCCACCACCACCATCGCCTACTTCTGTTGTGAAGGTGGGGATCCATCGGAGCAACGGATTGTGTCCTCTCTCGTCAGCCGGAATGAATGGCGCTGTGTGTGTGTGTAGTGTGTAAAAGGATGTAGTGTGTGGGAATGAGTTGTCTGTGCAAATCGAGGAGGACACGAGAGAGGATATATTGCTACGGTCGAGGATAGTGATACTGCCGCACGCGACACGATCGTGATGGGATCAGCTGTTGTCCCATTGCCAAACTCATATGCCACAATTTGATCTGTATATTTTTGGGTAGCGTATAGAGTGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTATGTTAGTCGTTAGTGGTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGT]

[+] EMBL BM615563             [CCGCCGACCGGCTAGTGTTTTGAGAGGTCACACTCGATATAAGCCCATAACGGTGAACAGACAGACGGGAGGTTCGTTCGTGCACTTGAACGAGACATAAAACACCCAAAAGGACATATAAACGATTGCATCTCGCCGCGTACCCTTTATCGCAACGCACGCGCGTGTGTGTGTGAATCGGTTTTAGATTGAAAGCACTTCCGGCACCATAAAGCGTGTGCGAACTGTAGTCAACCGCTGTACCGAGAGAGAGAGAGAAAGATCGTGCAAAAACACTTTTTCCATCGCCGGTAGTCATCCAAGGTGGTCGACTTGGCATCCGTCAGCGAACCGCGCCGTAGTAGTTGTAGCGAGGGCAGTTCCACTGCTCCACCAGACGACGAACGTACAGTGCCGCCCAGTGGCGAAGGAATCGCCAGCAGTGACACCAGCAGTGTTGTGTGTGGTGAGTTGGTGCGTGAACAAAACGCCTGCCAGGAAGCACAGGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAAGAAGGAGCCTTACTCGATCGAATCCACAAGATGACGGACGTAGCACACGAGCTTGGCGCACTTCGATTGATCGTGGACTCTCCACTGTCGTCGAAGGTGGCCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM648081             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCGGGAAGCACAGGAT         CAGCAGCAGCAGCAGCAGCAGGAAGAAGGAGCCTTACTCGATCGAATCCACAAGATGACGGACGTAGCACACGAGCTTGGCGCACTTCGATTGATCGTGGACTCTCCACTGTCGTCGAAGGTGGCCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGCAAGAAGGCCAACATCCAGGTGTACCAGGAAATGCTCGAAGAAGAACCCCGACATCAAGATGATCTACTTTGGCGAACTGTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTTGCTGCGCGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGACGACCACGTGCCGGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACCTTAGGAATGCTAGAACCTATAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX603591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGACGACCACGTGCCGGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACCTTAGAAATGCTAGAACCTATAGTAGCAGTAAGCGCGTGTCGTCAAGTCGTCAGCTCTCGTCGTCAGCCGCCACCACCACCATCGCCTACTTCTGTTGTGAAGGTGGGGATCCATCGGAGCAACGGATTGTGTCCTCTCTCGTCAGCCGGAATGAATGGCGCTGTGTGTGTGTGTAGTGTGTAAAAGGATGTAGTGTGTGGGAATGAGTTGTCTGTGCAAATCGAGGAGGACACGAGAGAGGATATATTGCTACGGTCGAGGATAGTGATACTGCC                                                                                                                                                                                                   ]
[+] EMBL BM607054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACCTTAGGAATGCTAGGACCTATAGTAGCAGTAAGCGCGTGTCGTCAAGTCGTCAGCTCTCGTCGTCAGCCGCCACCACCACCACCGCCTACTTCTGTTGTGAAGGTGGAGATCCATCGGAGCAACGGATTGTGTCCTCTCTCGTCAGCCGGAATGAATGGCGCTGTGTGTGTGTGTAGTGTGTAAAAGGATGTAGTGTGTGGGAATGAGTTGTCTGTGCAAATCAAGGAGGACACGAGAGAGGATATATTGCTACGGTTGAGGATAGTGATACTGCCGCACGCGACACGATCGTGATGGGATCAGCTGTTGTCCCATTGCCAAACTCATATGCCACAATTTGATCTGTATATTTTTGGGTAGCGTATAGAGTGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTATGTTAGTCGTTAGTGGTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGT]




>consensus_8004#0
CCGCCGACCGGCTAGTGTTTTGAGAGGTCACACTCGATATAAGCCCATAACGGTGAACAG
ACAGACGGGAGGTTCGTTCGTGCACTTGAACGAGACATAAAACACCCAAAAGGACATATA
AACGATTGCATCTCGCCGCGTACCCTTTATCGCAACGCACGCGCGTGTGTGTGTGAATCG
GTTTTAGATTGAAAGCACTTCCGGCACCATAAAGCGTGTGCGAACTGTAGTCAACCGCTG
TACCGAGAGAGAGAGAGAAAGATCGTGCAAAAACACTTTTTCCATCGCCGGTAGTCATCC
AAGGTGGTCGACTTGGCATCCGTCAGCGAACCGCGCCGTAGTAGTTGTAGCGAGGGCAGT
TCCACTGCTCCACCAGACGACGAACGTACAGTGCCGCCCAGTGGCGAAGGAATCGCCAGC
AGTGACACCAGCAGTGTTGTGTGTGGTGAGTTGGTGCGTGAACAAAACGCCTGCCAGGAA
GCACAGGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAAGAAGGAGCCTTACTCGAT
CGAATCCACAAGATGACGGACGTAGCACACGAGCTTGGCGCACTTCGATTGATCGTGGAC
TCTCCACTGTCGTCGAAGGTGGCCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCG
CAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTACAGATC
AGCAAGGAGGAGTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGCAAGAAG
GCCAACATCCAGGTGTACCAGGAAATGCTCGAAGAAGAACCCCGACATCAAGATGATCTA
CTTTGGCGAACTGTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTTGCT
GCGCGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGA
CGACCACGTGCCGGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGG
CAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACC
TTAGGAATGCTAGAACCTATAGTAGCAGTAAGCGCGTGTCGTCAAGTCGTCAGCTCTCGT
CGTCAGCCGCCACCACCACCATCGCCTACTTCTGTTGTGAAGGTGGGGATCCATCGGAGC
AACGGATTGTGTCCTCTCTCGTCAGCCGGAATGAATGGCGCTGTGTGTGTGTGTAGTGTG
TAAAAGGATGTAGTGTGTGGGAATGAGTTGTCTGTGCAAATCGAGGAGGACACGAGAGAG
GATATATTGCTACGGTCGAGGATAGTGATACTGCCGCACGCGACACGATCGTGATGGGAT
CAGCTGTTGTCCCATTGCCAAACTCATATGCCACAATTTGATCTGTATATTTTTGGGTAG
CGTATAGAGTGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTATGTTAGTCGTTAG
TGGTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGT

consensusID : consensus_8004#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 984
fasta sequence

                              [ATGCACGAATCCCCAGGTTAATTCGAAGGGTNAATGTNTGTCCCAGACGGCGCGACGACCACGTGCCGGTGTACCTATACCAAACCGGTCGCCCAGATACCGGGACATNTCTACGTACGTGCAAATCAGACGGAAATATCGGCGCAGTATATAAAAGGGGGTNCCCCGCAAAGACCCGGAAGGGCCCCGTATAAAGCNGCCCGAANATAGGCCAAAGTTGGGTATTAAGCGCGTATCATGGANANAGTTGGCGTTATGTGAGAGCCGCCCGTTNAAAGTTTAACTGGGTTACGGGCCGAATGGCTAANANGCTCTGCTGTNGTACAGGTACGAGATGTTCNGGTACGAGGCCTCTATCGCGTACGGANTACGAGGGCCGGGCCGAGNNCGCAACCGCAAAACGCCAAGTTTCGGGACCGCCCGTTAAAAACATTTTACCGTTATGGCTTATANGGATNGGCANAATGGANGTTATGGTGGGAGATGGAAGATTNCACCGNAACTTACGTGGACGGCNACGNGCCANACACTGGCAGGAAATAATCNGGCTAGGTACCCTTACGTACTACCGATACTNAAGGCNCCGNGAAACATTGAANAATTGTGGCCGGCTANGGTATGTAGTTAGTAGTATGGNTAAANGATAGGTTTGGNTTATACAAAAGCGGAGTTGTTAACATTNGGTNTNGCATGGTGGNAAANANTGCANGNGAGCTGGGGNTCNTNNGNTTGGCNCCGNCCTACCCCCGAGGCCTGGTNGATCCCTGCCGAAGNACANGAATGAGGGCGTGTTTATTATNATTTTTGGCNCTAACGCNGGTAACGNAGTGAACNTAAGTTGGNAGATTACCCTTGGCTGACGCAGANAGGCCTGCAAACCAACTGATTANNCTGTTCACTTGTGGTGTGGAACTTTCCACAGGCGCCAGGCACATAGGTGAGTNGTCCCTCANTATTTTATGTGGTGCCCCAATNAGTGATGCC]

[+] EMBL AL933510             [ATGCACGAATCCCCAGGTTAATTCGAAGGGTNAATGTNTGTCCCAGACGGCGCGACGACCACGTGCCGGTGTACCTATACCAAACCGGTCGCCCAGATACCGGGACATNTCTACGTACGTGCAAATCAGACGGAAATATCGGCGCAGTATATAAAAGGGGGTNCCCCGCAAAGACCCGGAAGGGCCCCGTATAAAGCNGCCCGAANATAGGCCAAAGTTGGGTATTAAGCGCGTATCATGGANANAGTTGGCGTTATGTGAGAGCCGCCCGTTNAAAGTTTAACTGGGTTACGGGCCGAATGGCTAANANGCTCTGCTGTNGTACAGGTACGAGATGTTCNGGTACGAGGCCTCTATCGCGTACGGANTACGAGGGCCGGGCCGAGNNCGCAACCGCAAAACGCCAAGTTTCGGGACCGCCCGTTAAAAACATTTTACCGTTATGGCTTATANGGATNGGCANAATGGANGTTATGGTGGGAGATGGAAGATTNCACCGNAACTTACGTGGACGGCNACGNGCCANACACTGGCAGGAAATAATCNGGCTAGGTACCCTTACGTACTACCGATACTNAAGGCNCCGNGAAACATTGAANAATTGTGGCCGGCTANGGTATGTAGTTAGTAGTATGGNTAAANGATAGGTTTGGNTTATACAAAAGCGGAGTTGTTAACATTNGGTNTNGCATGGTGGNAAANANTGCANGNGAGCTGGGGNTCNTNNGNTTGGCNCCGNCCTACCCCCGAGGCCTGGTNGATCCCTGCCGAAGNACANGAATGAGGGCGTGTTTATTATNATTTTTGGCNCTAACGCNGGTAACGNAGTGAACNTAAGTTGGNAGATTACCCTTGGCTGACGCAGANAGGCCTGCAAACCAACTGATTANNCTGTTCACTTGTGGTGTGGAACTTTCCACAGGCGCCAGGCACATAGGTGAGTNGTCCCTCANTATTTTATGTGGTGCCCCAATNAGTGATGCC]




>consensus_8004#1
ATGCACGAATCCCCAGGTTAATTCGAAGGGTNAATGTNTGTCCCAGACGGCGCGACGACC
ACGTGCCGGTGTACCTATACCAAACCGGTCGCCCAGATACCGGGACATNTCTACGTACGT
GCAAATCAGACGGAAATATCGGCGCAGTATATAAAAGGGGGTNCCCCGCAAAGACCCGGA
AGGGCCCCGTATAAAGCNGCCCGAANATAGGCCAAAGTTGGGTATTAAGCGCGTATCATG
GANANAGTTGGCGTTATGTGAGAGCCGCCCGTTNAAAGTTTAACTGGGTTACGGGCCGAA
TGGCTAANANGCTCTGCTGTNGTACAGGTACGAGATGTTCNGGTACGAGGCCTCTATCGC
GTACGGANTACGAGGGCCGGGCCGAGNNCGCAACCGCAAAACGCCAAGTTTCGGGACCGC
CCGTTAAAAACATTTTACCGTTATGGCTTATANGGATNGGCANAATGGANGTTATGGTGG
GAGATGGAAGATTNCACCGNAACTTACGTGGACGGCNACGNGCCANACACTGGCAGGAAA
TAATCNGGCTAGGTACCCTTACGTACTACCGATACTNAAGGCNCCGNGAAACATTGAANA
ATTGTGGCCGGCTANGGTATGTAGTTAGTAGTATGGNTAAANGATAGGTTTGGNTTATAC
AAAAGCGGAGTTGTTAACATTNGGTNTNGCATGGTGGNAAANANTGCANGNGAGCTGGGG
NTCNTNNGNTTGGCNCCGNCCTACCCCCGAGGCCTGGTNGATCCCTGCCGAAGNACANGA
ATGAGGGCGTGTTTATTATNATTTTTGGCNCTAACGCNGGTAACGNAGTGAACNTAAGTT
GGNAGATTACCCTTGGCTGACGCAGANAGGCCTGCAAACCAACTGATTANNCTGTTCACT
TGTGGTGTGGAACTTTCCACAGGCGCCAGGCACATAGGTGAGTNGTCCCTCANTATTTTA
TGTGGTGCCCCAATNAGTGATGCC

consensusID : consensus_8004#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 595
fasta sequence

                              [CCGCCCACGCGTCCGGATTGATCGTGGACTCTCCACTGTCGTCGAAGGTGGCCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGCAAGAAGGCCAACATCCAGGTGTACCAGGAAATGCTCGAACTCTGCCAGGTGATCGACGTTGACGGCAAGCCCGTGTCGAAGAAGAACCCCGACATCAAGATGATCTACTTTGGCGAACTGTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTTGCTGCGCGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGACGACCACGTGCCTGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACCTTAGGAATGCTAGAACCTATAGTAGCAGTAAGCGCGTGTCGTCAA]

[+] EMBL BM625190             [CCGCCCACGCGTCCGGATTGATCGTGGACTCTCCACTGTCGTCGAAGGTGGCCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGCAAGAAGGCCAACATCCAGGTGTACCAGGAAATGCTCGAACTCTGCCAGGTGATCGACGTTGACGGCAAGCCCGTGTCGAAGAAGAACCCCGACATCAAGATGATCTACTTTGGCGAACTGTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTTGCTGCGCGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGACGACCACGTGCCTGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTTACCTTAGGAATGCTAGAACCTATAGTAGCAGTAAGCGCGTGTCGTCAA]




>consensus_8004#2
CCGCCCACGCGTCCGGATTGATCGTGGACTCTCCACTGTCGTCGAAGGTGGCCCTATTTA
ACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGG
CGTCACGCGGCATGGCCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAACCCAAGGCGG
GCAGCTTAACTGAGTACCGAGGCAAGAAGGCCAACATCCAGGTGTACCAGGAAATGCTCG
AACTCTGCCAGGTGATCGACGTTGACGGCAAGCCCGTGTCGAAGAAGAACCCCGACATCA
AGATGATCTACTTTGGCGAACTGTTTAATATTTACACACACATTAACGACAAGCTGGTCG
GACTGTTGCTGCGCGCCCGCAAGCACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCC
AGCGGCGCGACGACCACGTGCCTGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACA
TTCTCGTCGGCAAGCAGACGGAAATTCGGCGCAGTTTAAGTCCCAACCCGCAGCCTACCA
ACATGTTACCTTAGGAATGCTAGAACCTATAGTAGCAGTAAGCGCGTGTCGTCAA

consensusID : consensus_8004#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence

                              [CAGAATCGGCCACGAGGTNTACACGGAAGAGCTGGAAGAGCTGGAAGAGGAGTTGGGCCGTGAGGCAAGATTGCGTCGTCTCGAGCGTCGTCTGCTGCTCGAGGAGGACCACCTCCGAGGGCGTATGCTGCGTGAGGATGAGCTCCGTCGTCAGCGATCGTGCCGGCGACGGCATCAGCAGCAGAAGCAGCAGTACCAGCTGTCACTCGATCGTCGCCAGCAGCGTGAGCCCGAGCCGGAAGTGGTGCGTGGCCCGAACGTGCGTCGTCTGGTCGCTTGTTACGAGCTGAAGCGTAGCGACATCAGCGAAACCGACGCCCAGTCCCTGCAGAATCTGTTCACCCAAGTGGATGACCATCCGATGCGCCACTGCACCGGTGCCCGTTCGCCCGATCGTTGCTGACTCTCCACTGTCGTCGAAGGTGGGCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGNCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAGTAAGTAAAGCGAATGGCAAGGA]

[+] EMBL BX469520             [CAGAATCGGCCACGAGGTNTACACGGAAGAGCTGGAAGAGCTGGAAGAGGAGTTGGGCCGTGAGGCAAGATTGCGTCGTCTCGAGCGTCGTCTGCTGCTCGAGGAGGACCACCTCCGAGGGCGTATGCTGCGTGAGGATGAGCTCCGTCGTCAGCGATCGTGCCGGCGACGGCATCAGCAGCAGAAGCAGCAGTACCAGCTGTCACTCGATCGTCGCCAGCAGCGTGAGCCCGAGCCGGAAGTGGTGCGTGGCCCGAACGTGCGTCGTCTGGTCGCTTGTTACGAGCTGAAGCGTAGCGACATCAGCGAAACCGACGCCCAGTCCCTGCAGAATCTGTTCACCCAAGTGGATGACCATCCGATGCGCCACTGCACCGGTGCCCGTTCGCCCGATCGTTGCTGACTCTCCACTGTCGTCGAAGGTGGGCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGTTCTCCGATGCACAGGCGTCACGCGGCATGGNCAGGCTACAGATCAGCAAGGAGGAGTATGGCAAGTAAGTAAAGCGAATGGCAAGGA]




>consensus_8004#3
CAGAATCGGCCACGAGGTNTACACGGAAGAGCTGGAAGAGCTGGAAGAGGAGTTGGGCCG
TGAGGCAAGATTGCGTCGTCTCGAGCGTCGTCTGCTGCTCGAGGAGGACCACCTCCGAGG
GCGTATGCTGCGTGAGGATGAGCTCCGTCGTCAGCGATCGTGCCGGCGACGGCATCAGCA
GCAGAAGCAGCAGTACCAGCTGTCACTCGATCGTCGCCAGCAGCGTGAGCCCGAGCCGGA
AGTGGTGCGTGGCCCGAACGTGCGTCGTCTGGTCGCTTGTTACGAGCTGAAGCGTAGCGA
CATCAGCGAAACCGACGCCCAGTCCCTGCAGAATCTGTTCACCCAAGTGGATGACCATCC
GATGCGCCACTGCACCGGTGCCCGTTCGCCCGATCGTTGCTGACTCTCCACTGTCGTCGA
AGGTGGGCCTATTTAACCAGACTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATCCGT
TCTCCGATGCACAGGCGTCACGCGGCATGGNCAGGCTACAGATCAGCAAGGAGGAGTATG
GCAAGTAAGTAAAGCGAATGGCAAGGA

consensusID : consensus_8004#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 370
fasta sequence

                              [GCGACACGATCGTGATGGGATCAGCTGTTGTCCCATTGCCAAACTCATATGTCACAATTTGATCTGTATATTTTTGGGTAGCGTATAGAGTGAAAGCGAGAGAGAGAGGAGCTATGTTAGTCGTTAGTGGTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGTCATCTTCGTCGTTGTAGCTGTTAAGTGATCGTCCTCCCCACAGAGTTGGTGTGAGCGATGGAGAGAACAGGTTTTGGGAAGGGTGCGGTGTAAAAAGATCACCGCAGCTCCCTTGTAATGTTTTGGTTCCGTTTTGGATCGGATATTATGATTTTTGTGTGAGTGTATCTGTGTCGTTTTTCGGGTCGTGCGC]

[+] EMBL BX608143             [GCGACACGATCGTGATGGGATCAGCTGTTGTCCCATTGCCAAACTCATATGTCACAATTTGATCTGTATATTTTTGGGTAGCGTATAGAGTGAAAGCGAGAGAGAGAGGAGCTATGTTAGTCGTTAGTGGTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGTCATCTTCGTCGTTGTAGCTGTTAAGTGATCGTCCTCCCCACAGAGTTGGTGTGAGCGATGGAGAGAACAGGTTTTGGGAAGGGTGCGGTGTAAAAAGATCACCGCAGCTCCCTTGTAATGTTTTGGTTCCGTTTTGGATCGGATATTATGATTTTTGTGTGAGTGTATCTGTGTCGTTTTTCGGGTCGTGCGC]




>consensus_8004#4
GCGACACGATCGTGATGGGATCAGCTGTTGTCCCATTGCCAAACTCATATGTCACAATTT
GATCTGTATATTTTTGGGTAGCGTATAGAGTGAAAGCGAGAGAGAGAGGAGCTATGTTAG
TCGTTAGTGGTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGTCAT
CTTCGTCGTTGTAGCTGTTAAGTGATCGTCCTCCCCACAGAGTTGGTGTGAGCGATGGAG
AGAACAGGTTTTGGGAAGGGTGCGGTGTAAAAAGATCACCGCAGCTCCCTTGTAATGTTT
TGGTTCCGTTTTGGATCGGATATTATGATTTTTGTGTGAGTGTATCTGTGTCGTTTTTCG
GGTCGTGCGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8004#0      CCGCCGACCGGCTAGTGTTTTGAGAGGTCACACTCGATATAAGCCCATAACGGTGAACAG 60
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      ACAGACGGGAGGTTCGTTCGTGCACTTGAACGAGACATAAAACACCCAAAAGGACATATA 120
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      AACGATTGCATCTCGCCGCGTACCCTTTATCGCAACGCACGCGCGTGTGTGTGTGAATCG 180
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      GTTTTAGATTGAAAGCACTTCCGGCACCATAAAGCGTGTGCGAACTGTAGTCAACCGCTG 240
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      TACCGAGAGAGAGAGAGAAAGATCGTGCAAAAACACTTTTTCCATCGCCGGTAGTCATCC 300
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------ATGCACGAATCCCCAGGTTAATTCGAAGGG 30
                                                                                  

consensus_8004#0      AAGGTGGTCGACTTGGCATCCGTCAGCGAACCGCGCCGTAGTAGTTGTAGCGAGGGCAGT 360
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      TNAATGTNTGTCCCAGACGGCGCGACGACCACGTGCCGGTGTACCTATACCAAAC-CGGT 89
                                                                                  

consensus_8004#0      TCCACTGCTCCACCAGACGACGAACGTACAGTGCCGCCCAGTGGCGAAGGAATCGCCAGC 420
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      CGCCCAGATACCGGGACATNTCTACGTACGTGCAAATCAGACGGAAATATCGGCGCAGTA 149
                                                                                  

consensus_8004#0      AGTGACACCAGCAGTGTTGTGTGTGGTGAGTTGGTGCGTGAACAAAACGCCTGCCAGGAA 480
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      TATAAAAGGGGGTNCCCCGCAAAGACCCGGAAGGGCCCCGTATAAAGCNGCCCGAANATA 209
                                                                                  

consensus_8004#0      GCACAGGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAAGAAGGAGCCTTACTCGAT 540
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      GGCCAAAGTTGGGTATTAAGCGCGTATCATGGANANAGTTGGCGTTATGTGAGAGCCGCC 269
                                                                                  

consensus_8004#0      CGAATCCACAAGATGACGGACGTAGCACACGAGCTTGGCGCACTTCGATTGATCGTGGAC 600
consensus_8004#2      ------------------------------CCGCCCA-CGCGTCCGGATTGATCGTGGAC 29
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------CAGAATCGGCCACGAGGTNTACACGGAAGAGCTGGAAGAGCTGGAAGA 48
consensus_8004#1      CGTTNAAAGTTTAACTGGGTTACGGGCCGAATGGCTAANANGCTCTGCTGTNGTACAGGT 329
                                                                                  

consensus_8004#0      TCTCCACTGTCGTCGAAGGTGGCCCTATTTAAC-CAGACTGCCCAGAGCCACCGGGAATC 659
consensus_8004#2      TCTCCACTGTCGTCGAAGGTGGCCCTATTTAAC-CAGACTGCCCAGAGCCACCGGGAATC 88
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      GGAGTTGGGCCGTGAGGCAAGATTGCGTCGTCT-CGAGCGTCGTCTGCTGCTCGAGGAGG 107
consensus_8004#1      ACGAGATGTTCNGGTACGAGGCCTCTATCGCGTACGGANTACGAGGGCCGGGCCGAGNNC 389
                                                                                  

consensus_8004#0      GCAACTCTCCAATCCG----TTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTAC 715
consensus_8004#2      GCAACTCTCCAATCCG----TTCTCCGATGCACAGGCGTCACGCGGCATGGCCAGGCTAC 144
consensus_8004#4      --------GCGACACG----ATCGTGATGGGATCAGC-TGTTGTCCCATTGCCAAACT-C 46
consensus_8004#3      ACCACCTCCGAGGGCG----TATGC---TGCGTGAGGATGA-GCTCCGTCGTCAGCGATC 159
consensus_8004#1      GCAACCGCAAAACGCCAAGTTTCGGGACCGCCCGTTAAAAACATTTTACCGTTATGGCTT 449
                                    *              *                    *  *      

consensus_8004#0      AGATCAGCAAGGAGGA-GTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGC 774
consensus_8004#2      AGATCAGCAAGGAGGA-GTATGGCAAACCCAAGGCGGGCAGCTTAACTGAGTACCGAGGC 203
consensus_8004#4      ATAT--GTCACAATTT-GATCTGTATATTTTTGGGTAGCGTATAGAGTGAAAGCGAGAGA 103
consensus_8004#3      GTGCCGGCGACGGCAT-CAGCAGCAGAAGCAGCAGTACCAGCTGTCACTCG-ATCGTCGC 217
consensus_8004#1      ATANGGATNGGCANAATGGANGTTATGGTGGGAGATGGAAGATTNCACCGNAACTTACGT 509
                                              *                 *               * 

consensus_8004#0      AAGAAGGCCAACATCCAGGTGTACCAGGAA-ATGCTCGAA-------------------- 813
consensus_8004#2      AAGAAGGCCAACATCCAGGTGTACCAGGAA-ATGCTCGAACTCTGCCAGGTGATCGACGT 262
consensus_8004#4      GAGAGGAGCTATGTT-AGTCGTTAGTGGTA-GTCGTCGA--------------------- 140
consensus_8004#3      CAGCAGCGTGAGCCCGAGCCGGAAGTGGTGCGTGGCCCGAACGTGCGTCGTCTGGTCGCT 277
consensus_8004#1      GGACGGCNACGNGCCANACACTGGCAGGAA-ATAATCNGGCTAGGTACCCTTACGTACT- 567
                           *                    **    *   *                       

consensus_8004#0      ---------------------GAAGAACCCCGACATCAAGATGATCTACTTTGGCGAACT 852
consensus_8004#2      TGACGGCAAGCCCGTGTCGAAGAAGAACCCCGACATCAAGATGATCTACTTTGGCGAACT 322
consensus_8004#4      ---------------------------TTCTGATGTGACTAT--TGTATTTCCACTGTTG 171
consensus_8004#3      TGTTACGA----------GCTGAAGCGTAGCGACATCAGCGAAACCGACGCCCAGTCCCT 327
consensus_8004#1      ----------------------ACCGATACTNAAGGCNCCGNGA--AACATTGAANAATT 603
                                                      *              *            

consensus_8004#0      GTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTT-GCTGCGCGCCCGCA 911
consensus_8004#2      GTTTAATATTTACACACACATTAACGACAAGCTGGTCGGACTGTT-GCTGCGCGCCCGCA 381
consensus_8004#4      TGTCGTCATCTTCGT-CGTTGTAGCTGTTAAGTGATCGTCCTCCCCACAGAGTTGGTGTG 230
consensus_8004#3      GCAGAATCTGTTCACCCAAGTGGATGACCATCCGATGCGCCACTGCACCG-GTGCCCGTT 386
consensus_8004#1      GT--GGCCGGCTANGGTATGTAGTTAGTAGTATGGNTAAANGATAGGTTTGGNTTATACA 661
                                                       *                 *        

consensus_8004#0      AGC-ACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGAC--GACCAC- 967
consensus_8004#2      AGC-ACGACCTCATCCAGTTCGAGGGTGAATGTCTGTTCCAGCGGCGCGAC--GACCAC- 437
consensus_8004#4      AGCGATGGAGAGAACAGGTTTTGGGAAGGGTG-CGGT----GTAAAAAGAT--CACCGCA 283
consensus_8004#3      CGC-CCGATCGTTGCTGACTCT----CCACTGTCGTCGAAGGTGGGCCTATTTAACCAGA 441
consensus_8004#1      AAAGCGGAGTTGTTAACATTNGGTNTNGCATGGTGGNAAANANTGCANGNG--AGCTGGG 719
                            *            *          **                       *    

consensus_8004#0      GTGCCGGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAG 1027
consensus_8004#2      GTGCCTGTGTACCTTACCAAACCGGTCGCCCAGATCCGGGACATTCTCGTCGGCAAGCAG 497
consensus_8004#4      GCTCCCTTGTAATGTTTTGGTTCCGT--TTTGGATC--GGATATTATGATTTTTGTGTGA 339
consensus_8004#3      CTGCCCAGAGCCACCGGGAATCGCAACTCTCCAATC-----CGTTCTC--CGATGCACAG 494
consensus_8004#1      GNTCNTNNGNTTGGCNCCGN-CCTACCCCCGAGGCCTGGTNGATCCCTGCCGAAGNACAN 778
                         *                               *       *                

consensus_8004#0      ACGGAAATTCG-GCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTT--ACCTTAG 1084
consensus_8004#2      ACGGAAATTCG-GCGCAGTTTAAGTCCCAACCCGCAGCCTACCAACATGTT--ACCTTAG 554
consensus_8004#4      GTGTATCTGTG-TCGTTTTTCGGGTCGTGCGC---------------------------- 370
consensus_8004#3      GCGT-CACGCG-GCATGGNCAGGCTACAGATCAGCAAGG-AGGAGTATGGC--AAGTAAG 549
consensus_8004#1      GAATGAGGGCGTGTTTATTATNATTTTTGGCNCTAACGCNGGTAACGNAGTGAACNTAAG 838
                                *             *                                   

consensus_8004#0      GAATGCTAGAACCTATAGTAGCAGTAAGC--GCGTGTCGTCAAGTCGTCAGCTCTCGTCG 1142
consensus_8004#2      GAATGCTAGAACCTATAGTAGCAGTAAGC--GCGTGTCGTCAA----------------- 595
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      TAAAGCGAATGGCAAGGA------------------------------------------ 567
consensus_8004#1      TTGGNAGATTACCCTTGGCTGACGCAGANAGGCCTGCAAACCAACTGATTANNCTGTTCA 898
                                                                                  

consensus_8004#0      TCAGCCGCCACCACCACCATCGCCTACTTCTGTTGTGAAGGTGGGGATCCATCGGAGCAA 1202
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      CTTGTGGTGTGGAACTTTCCACAGGCGCCAGGCACATAGGTGAGTNGTCCCTCANTATTT 958
                                                                                  

consensus_8004#0      CGGATTGTGTCCTCTCTCGTCAGCCGGAATGAATGGCGCTGTGTGTGTGTGTAGTGTGTA 1262
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      TATGTGGTGCCCCAATNAGTGATGCC---------------------------------- 984
                                                                                  

consensus_8004#0      AAAGGATGTAGTGTGTGGGAATGAGTTGTCTGTGCAAATCGAGGAGGACACGAGAGAGGA 1322
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      TATATTGCTACGGTCGAGGATAGTGATACTGCCGCACGCGACACGATCGTGATGGGATCA 1382
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      GCTGTTGTCCCATTGCCAAACTCATATGCCACAATTTGATCTGTATATTTTTGGGTAGCG 1442
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      TATAGAGTGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTATGTTAGTCGTTAGTG 1502
consensus_8004#2      ------------------------------------------------------------
consensus_8004#4      ------------------------------------------------------------
consensus_8004#3      ------------------------------------------------------------
consensus_8004#1      ------------------------------------------------------------
                                                                                  

consensus_8004#0      GTAGTCGTCGATTCTGATGTGACTATTGTATTTCCACTGTTGTGTCGT 1550
consensus_8004#2      ------------------------------------------------
consensus_8004#4      ------------------------------------------------
consensus_8004#3      ------------------------------------------------
consensus_8004#1      ------------------------------------------------