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Anopheles gambiae
cluster # 8017 cluster # 8017       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8017#0 length = 1163 sequences # 5  
consensus_8017#1 length = 817 sequences # 3  
consensus_8017#2 length = 598 sequences # 1  

consensusID : consensus_8017#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1163
fasta sequence
                              [GACCCACGCGTCCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGATCTCTTC-CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGAGTACCTGTTCTACAACCGCATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCTTCTCCGCCGTGCCACGCAACGCCGTCGGCAGTCCGTTCGGGCGGAACCAACGCTCGCTCGACTCGATCGGCGGCGGCAATCTGCTCAAGCGAGCGTCACTCGACTCGATCGGCGGTGGAAACTTACTGAAGAAATAAGTAACCAGAAGCCACGGAACATCACGAGCTGACTAGAGATCGAATTTGGTAACCGCACAACGAAGCCACGATGGATTTGAGTTTATGGACCAACATTAAGTTACCGACAGCCAGGCCGGAGGAGTCTGTCCCACCCCACAGCATTGTTAACAAGCGCCCTTTTTCTGTTGGGGCCCGAACAAAAAAGAACAAACAAAGAACGATCATAATCATAATCTGACCTGGACACTTTGATACCTTGAGCAAATCGAACAATCGATTTGTTAAATTAAAAACACTCAAAATTATTTACCTCTGTGCTAGTTTTGTCCCCATTTGGTTGGAAAGTGGACACACACACATGCGCGCGTATCGTTTAAACGGAGCCCGACCCAAGCCCTTCTCTCTCTTGGCAAATTTAGCATTTGTTGAACTTAAATTGTAGCCTCCTTCATCGACACCGGGCTCGGAACCTCAACGGAAAAGTTGAGCGAACAAAAAAACGTCCGGCCAAGTAATAAAATGAAAAAAAAATCAACAATCAAACAAAATGTACAATAAAGCCCT]

[+] EMBL BM649172             [GACCCACGCGTCCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGATCTCTTC CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGAGTACCTGTTCTACAATCGCATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCTTCTCCGCCGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM582102             [           CCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGATCTCTTC CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGAGTACCTGTTCTACAATCGCATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCTTCTCCGCCGTGCCGCGCAACGCCGTCGGCAGTCCGTTCGGGCGGAACCAACGCTCGCTCGACTCGATCGGCGGTGGCAATCTGCTCAAGCGATCGTCACTCGACTCGATCGGCGGTGGAAACTTACTGAAGAAATAAGTAACCAGAAGCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM577668             [                                  TCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTG         TGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTGATTTTGTGAATTAGCCAAAAGTGTGCAAAGTGTGATCT TTCTCTCAAGCT TTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTGAAGCTACATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCCCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGAGTACCTGTTCTACAACCGTATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCTTCTCCGCCGTGCCACGCAACGCCGTCGGCAGTCCGTTCGGGCGGAACCAACGCTCGCTCGACTCGATCGGCGGCGGCAATCTGCTCAAGCGAGCGTCACTCGACTCGATCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09NW5             [                                        ACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCGGCTGGTGGAGAGAGTGATTTTGTGAATTAGACAAAAGTGTGCGAAGTGTGATCTCTCC CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTGAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGAGTACCTGTTCTACAACCGCATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCTTCTCCGCCGTGCCACGCAACGCCGTCGGCAGTCCGCTCGGGCGGAACCAACGCTCGCTCGACTCGATCGGCGGCGGCAATCTGCTCAAGCGAGCGTCACTCGACTCGATCGGCGGTGGAAACTTACTGAAGAAATAAGTAACCAGAAGCCACGGAACATCACGAGCTGACTAGAGATCGAATTTGGTAACCGCACAACGAAGCCACGATGGATTTGAGTTTATGGACCAACATTAAGTTACCGACAGCCAGGCCGGAGGAGTCTGTCCCACCCCACAGCATTGTTAACAAGCGCCCTTTTTCTGTTGGGGCCCGAACAAAAAAGAACAAACAAAGAACGATCATAATCATAATCTGACCTGGACACTTTGATACCTTGAGCAAATCGAACAATCGATTTGTTAAATTAAAAACACTCAAAATTATTTACCTCTGTGCTAGTTTTGTCCCCATTTGGTTGGAAAGTGGACACACACACATGCGCGCGTATCGTTTAAACGGAGCCCGACCCAAGCCCTTCTCTCTCTTGGCAAATTTAGCATTTGTTGAACTTA                                                                                                                                  ]
[-] EMBL CNS09NW6             [                                                                                                                                                                                                                                                                                                                aaaaaaaaTGTGGCGGGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGAGTACCTGTTCTACAACCGCATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCTTCTCCGCCGTGCCACGCAACGCCGTCGGCAGTCCGCTCGGGCGGAACCAACGCTCGCTCAACTCGATCGGCGGCGGCAATCTGCTCAAGCGAGCGTTACTCGACTCGATCGGCGGTGGAAACTTACTGAAGAAATAAGTAACCAGAAGCCACGGAACATCACGAGCTGACTAGAGATCGAATTTGGTAACCGCACAACGAAGCCACGATGGATTTGAGTTTATGGACCAACATTAAGTTACCGACAGCCAGGCCGGAGGAGTTTGTCCCCCCCCACAGCATTGTTAACAAGCGCCCTTTTTCTGTTGGGGCCCGAACAAAAAAGAACAAACAAAGAACGATCATAATCATAATCTGACCTGGACACTTTGATACCTTGAGCAAATCGAACAATCGATTTGTTAAATTAAAAAAACTCAAAATTATTTACCTCTGTGCTAGTTTTGTCCCCATTTGGTTGGAAAGTGGAAAAACAAACATGCGCGCGTATCGTTTAAACGGAGCCCGACCCAAGCCCTTCTCTCTCTTGGCAAATTTAGCATTTGTTGAACTTAAATTGTAGCCTCCTTCATCGACACCGGGCTCGGAACCTCAACGGAAAAGTTGAGCGAACAAAAAAACGTCCGGCCAAGTAATAAAATGAAAAAAAAATCAACAATCAAACAAAATGTACAATAAAGCCCT]


>consensus_8017#0 GACCCACGCGTCCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAG TTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGT GTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGA CTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGA TCTCTTCCTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGC TTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCG TGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACG ATGAGTACCTGTTCTACAACCGCATTCTGCTCAACTCGGCCGGCATCTACGACGGATCCT TCTCCGCCGTGCCACGCAACGCCGTCGGCAGTCCGTTCGGGCGGAACCAACGCTCGCTCG ACTCGATCGGCGGCGGCAATCTGCTCAAGCGAGCGTCACTCGACTCGATCGGCGGTGGAA ACTTACTGAAGAAATAAGTAACCAGAAGCCACGGAACATCACGAGCTGACTAGAGATCGA ATTTGGTAACCGCACAACGAAGCCACGATGGATTTGAGTTTATGGACCAACATTAAGTTA CCGACAGCCAGGCCGGAGGAGTCTGTCCCACCCCACAGCATTGTTAACAAGCGCCCTTTT TCTGTTGGGGCCCGAACAAAAAAGAACAAACAAAGAACGATCATAATCATAATCTGACCT GGACACTTTGATACCTTGAGCAAATCGAACAATCGATTTGTTAAATTAAAAACACTCAAA ATTATTTACCTCTGTGCTAGTTTTGTCCCCATTTGGTTGGAAAGTGGACACACACACATG CGCGCGTATCGTTTAAACGGAGCCCGACCCAAGCCCTTCTCTCTCTTGGCAAATTTAGCA TTTGTTGAACTTAAATTGTAGCCTCCTTCATCGACACCGGGCTCGGAACCTCAACGGAAA AGTTGAGCGAACAAAAAAACGTCCGGCCAAGTAATAAAATGAAAAAAAAATCAACAATCA AACAAAATGTACAATAAAGCCCT



consensusID : consensus_8017#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 817
fasta sequence
                              [GCAGAATCGGCACGAGGGTTACCCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGATCTCTTC-CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAAAAGTTGCAGCAGCTCGGCGGCGCCTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCGGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTACTATT-CCCGCGGGTTGGCGCCAATGTACGACAAGCGCAACTTTGA-CGAG-ATC-GATC-GGTTCCGCCCGGGTTCAACGGGTAAGCGGCAACCTGGAACTACGAGGCCTTCGTAACACCGGGTTNACGGGCNGAGCCAGCAATTGGGTACCAACNGGGGCGGCTTCTAGGAAGCGGTTAACCTTTGGACGCAAGNTCGAACCGG]

[+] EMBL BX469661             [GCAGAATCGGCACGAGGGTTAACCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGATCTCTTC CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAAAAGTTGCAGCAGCTCGGCGGCGCCTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCGGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTACTATT CCCGCGGGTTGGCGCCAATGTACGACAAGCGCAACTTTGACCGAGAATCGGATCGGGTTCCGCCCGGGTTCAACGGGTAAGCGGCAACCTGGAACTACGAGGCCTTCGTAACACCGGGTTNACGGGCNGAGCCAGCAATTGGGTACCAACNGGGGCGGCTTCTAGGAAGCGGTTAACCTTTGGACGCAAGNTCGAACCGG]
[+] EMBL BM643344             [                     CCGAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGCGAAGTGTGATCTCTTC CTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAAAAGTTGCAGCAGCTCGGCGGCGCCTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCGGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTACTATTCCCCGCGGGTTGGCGCCAATGTACGACAAGCGCAACTTTGA CGAG ATC GATC GGTTCGCCCCGG                                                                                                                                     ]
[+] EMBL BM618020             [                    ccgCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTG         TGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTGATTTTGTGAATTAGCCAAAAGTGTGCAAAGTGTGATCT TTCTCTCAAGCT TTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTGAAGCTACATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCCCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAGAAGTTGCAGCAGCTCGGCGGCGCTTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCTGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTACTATT CCCGCGGGTTGGCGCCAATGTACGACAAGCGCAACTTTGA CGAG ATC GATC GGTT CGCCC GGTTCAAC GGCAAGC GCAACCTGG ACTACGA GCCCTCGT ACACCGGTTT  C GGCCGA CCAcggggtac                                                          ]


>consensus_8017#1 GCAGAATCGGCACGAGGGTTACCCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAG CAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGT GTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGA TTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGC GAAGTGTGATCTCTTCCTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCA TGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACG GGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAAC GGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAAAAGTTGCAGCAGCTCGGCGGCG CCTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCGGCTGCTGGTGGTATTG CAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGA CGCTGCTGTACAACTACTATTCCCGCGGGTTGGCGCCAATGTACGACAAGCGCAACTTTG ACGAGATCGATCGGTTCCGCCCGGGTTCAACGGGTAAGCGGCAACCTGGAACTACGAGGC CTTCGTAACACCGGGTTNACGGGCNGAGCCAGCAATTGGGTACCAACNGGGGCGGCTTCT AGGAAGCGGTTAACCTTTGGACGCAAGNTCGAACCGG



consensusID : consensus_8017#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence
                              [CCGCCCACGCGTCCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTGATTTTGTGAATTAGCCAAAAGTGTGCAAAGTGTGATCTTTCTCTCAAGCTTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTGAAGCTACATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCCCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAGAAGTTGCAGCAGCTCGGCGGCGCTTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCTGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTA]

[+] EMBL BM629287             [CCGCCCACGCGTCCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTGTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTGATTTTGTGAATTAGCCAAAAGTGTGCAAAGTGTGATCTTTCTCTCAAGCTTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTGAAGCTACATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCCCACGGGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAACTGAAGCAGGTCAACGAGGAGAAGTTGCAGCAGCTCGGCGGCGCTTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCTGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCGGCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTA]


>consensus_8017#2 CCGCCCACGCGTCCGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAGCAATCCCA GTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGTGTGTGCTG TGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGATTCTTCAGACTTTCTTC AGCTGGTGGAGAGAGTGATTTTGTGAATTAGCCAAAAGTGTGCAAAGTGTGATCTTTCTC TCAAGCTTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCATGGTGAAGCTACATCTCG TCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCCCACGGGCTGCCCGTGAAGGAGC AGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAACGGCTGAACGATGGCCAAC TGAAGCAGGTCAACGAGGAGAAGTTGCAGCAGCTCGGCGGCGCTTCCACCAACGGTCAGC GAACGGCTGGAGGGGCGAGTAGTGCTGCTGCTGGTGGTATTGCAGGAGCCGCTTCGTCCG GCTTCAAGACGAAACGATCGCTCAACAACTCGGACCGGCGGACGCTGCTGTACAACTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8017#1      GCAGAATCGGCACGAGGGTTACCCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAG 60
consensus_8017#2      -------CCGCCCACGCGTC-CGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAG 52
consensus_8017#0      --------GACCCACGCGTC-CGCAGGCATCAAACGCTCTGCATCACACACTCCCAGCAG 51
                                * *  * **  * *************************************

consensus_8017#1      CAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGT 120
consensus_8017#2      CAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGT 112
consensus_8017#0      CAATCCCAGTTCGGTGTGGTTGCAAAGACAGCGCAAAACCTGACCCCAAGCAACCGCCGT 111
                      ************************************************************

consensus_8017#1      GTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGA 180
consensus_8017#2      GTGTGCTGTGTGTGT---------TCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGA 163
consensus_8017#0      GTGTGCTGTGTGTGTGCTGTGTGTTCCGTTAGACGATCTTGCGCGTGGCTGTGGCTCGGA 171
                      ***************         ************************************

consensus_8017#1      TTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGC 240
consensus_8017#2      TTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTGATTTTGTGAATTAGCCAAAAGTGTGC 223
consensus_8017#0      TTCTTCAGACTTTCTTCAGCTGGTGGAGAGAGTTATTTTGTGAATTAGCCAAAAGTGTGC 231
                      ********************************* **************************

consensus_8017#1      GAAGTGTGATCTCTTCCTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCA 300
consensus_8017#2      AAAGTGTGATCTTTCTCTCAAGCT-TTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCA 282
consensus_8017#0      GAAGTGTGATCTCTTCCTCACCTTCTTCCTTCTGCAACTGAAGTGATCTTTCCGTCAGCA 291
                       *********** *  ****   * ***********************************

consensus_8017#1      TGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACG 360
consensus_8017#2      TGGTGAAGCTACATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCCCACG 342
consensus_8017#0      TGGTAAAGCTTCATCTCGTCTGTGGCGTGCTGCTGTTCGCGTTCCTCGGCTGGGCTCACG 351
                      **** ***** ******************************************** ****

consensus_8017#1      GGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAAC 420
consensus_8017#2      GGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAAC 402
consensus_8017#0      GGCTGCCCGTGAAGGAGCAGGAGCTGGAGGAGGTGCTGACCAAGCTGCAGGAGCTGAAAC 411
                      ************************************************************

consensus_8017#1      GGCTGAACGATGGCCAACTGAAGCAGGTCAACGA---GGAAAAGTTG--CAGCAGCT-CG 474
consensus_8017#2      GGCTGAACGATGGCCAACTGAAGCAGGTCAACGA---GGAGAAGTTG--CAGCAGCT-CG 456
consensus_8017#0      GGCTGAACGATGAGTACCTGTTCTACAACCGCATTCTGCTCAACTCGGCCGGCATCTACG 471
                      ************   * ***    *   *  *     *   ** * *  * *** ** **

consensus_8017#1      GCGGCGCCTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCGGCTGCTGGTG 534
consensus_8017#2      GCGGCGCTTCCACCAACGGTCAGCGAACGGCTGGAGGGGCGAGTAGTGCTGCTGCTGGTG 516
consensus_8017#0      ACGGATCCTTCTCCGCCGTGCCACGCAACGCCGTCGG--CAGTCCGTTCGGGCGGAACCA 529
                       ***  * * * **  **  *  ** *  ** *  **  *     ** * *  *      

consensus_8017#1      GTATT-GCAGGAGCCGCTTCGTC-CGGCTTCAAGACGAAACGATCGCTCAACAACTCGGA 592
consensus_8017#2      GTATT-GCAGGAGCCGCTTCGTC-CGGCTTCAAGACGAAACGATCGCTCAACAACTCGGA 574
consensus_8017#0      ACGCTCGCTCGACTCGATCGGCGGCGGCAATCTGCTCAAGCGAGCGTCACTCGACTCGAT 589
                          * **  **  ** *  *   ****     *   ** *** **     * *****  

consensus_8017#1      C--CGGCGGACGCT-GCTGTACAACTAC-TATTC-----CCGCGGGTTGGCGCCAATGTA 643
consensus_8017#2      C--CGGCGGACGCT-GCTGTACAACTA--------------------------------- 598
consensus_8017#0      CGGCGGTGGAAACTTACTGAAGAAATAAGTAACCAGAAGCCACGGAACATCACGAGCTGA 649
                      *  *** ***  **  *** * ** **                                 

consensus_8017#1      CGACAAGCGCAACTTTG----------ACGAGATC--GATCGGTTCCGCCCG--GGTTCA 689
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      CTAGAGATCGAATTTGGTAACCGCACAACGAAGCCACGATGGATTTGAGTTTATGGACCA 709
                                                                                  

consensus_8017#1      ACG---GGTAAGCGGCAACCTGGAACTACGAGGCCTTCGTAACAC-CGGGTTNACGGGCN 745
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      ACATTAAGTTACCGACAGCCAGGCCGGAGGAGTCTGTCCCACCCCACAGCATTGTTAACA 769
                                                                                  

consensus_8017#1      GAGCCAGCAATTGGGTACCAACNGGGGCGGCTTCTAGGAAGCGGTTAACCTTTGGACGCA 805
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      AGCGCCCTTTTTCTGTTGGGGCCCGAACAAAAAAGAACAAACAAAGAACGATCATAATCA 829
                                                                                  

consensus_8017#1      AGNTCGAACCGG------------------------------------------------ 817
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      TAATCTGACCTGGACACTTTGATACCTTGAGCAAATCGAACAATCGATTTGTTAAATTAA 889
                                                                                  

consensus_8017#1      ------------------------------------------------------------
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      AAACACTCAAAATTATTTACCTCTGTGCTAGTTTTGTCCCCATTTGGTTGGAAAGTGGAC 949
                                                                                  

consensus_8017#1      ------------------------------------------------------------
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      ACACACACATGCGCGCGTATCGTTTAAACGGAGCCCGACCCAAGCCCTTCTCTCTCTTGG 1009
                                                                                  

consensus_8017#1      ------------------------------------------------------------
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      CAAATTTAGCATTTGTTGAACTTAAATTGTAGCCTCCTTCATCGACACCGGGCTCGGAAC 1069
                                                                                  

consensus_8017#1      ------------------------------------------------------------
consensus_8017#2      ------------------------------------------------------------
consensus_8017#0      CTCAACGGAAAAGTTGAGCGAACAAAAAAACGTCCGGCCAAGTAATAAAATGAAAAAAAA 1129
                                                                                  

consensus_8017#1      ----------------------------------
consensus_8017#2      ----------------------------------
consensus_8017#0      ATCAACAATCAAACAAAATGTACAATAAAGCCCT 1163
                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)