cluster # 8033

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Anopheles gambiae
cluster # 8033 cluster # 8033 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8033#0 length = 2145 sequences # 6
consensus_8033#1 length = 698 sequences # 1

consensus_8033#2 length = 485 sequences # 1
consensus_8033#3 length = 353 sequences # 1

consensusID : consensus_8033#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2145
fasta sequence

                              [GTGAATGTTGGTTCATATATCCCGGTTTAGGATAAAAAAAGAAGGGAAAATTGTCTTTAGATGGTGCTTTACTAGAAGAGTAGTGTTTGCATGGCAGCGTACAGCTAGCGTACCGTGCTTTTTTTGTCCGCTGTATGTGTGTGTGTGTCCGGTGTTTGTTTTGCCTAGTGGTCATGTCAACCCGTGTGTTAGAGTGGAGTGGAGCAGGAAGAGAAAGAGCCTTAGCTCTTAGCTAGCACAGCGGAAGAAGCGCATGTGCGGTGTTGGTAGTGTGGTGCAGCAGGGAAGTAGCACAATGATGCAGTTCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCACACACACCCAGGTTGTTCCTGTCGGAAGGCGTGTGTATGTGTGCACATGCACTAACCGCCATTTACCATTGGGATATGCTCTGCTGCATCACATTTTACACATCAAGAAATTCATCGGTTGTTTTTGTAGATTGTTATACAACACACACACACACACACACCAGATCACTAAGTTGATGTGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCATTCTCTTTCGCCCACCTGCTTGCTGGATGAAATTTGAAACCACTGTGTTTCGAACGTTCTTGCTCTGTGTTGTTATGCGATTTGCTTGAAACCAAGCGTACGCTAAGAGCAACGTAGTAGAGCAAGACAACATTAACGAATGAGCCTCTCTATTGTTGATTGAACCGTTTTTCTTTGTTTTTGTTTTTGTTTAAGTAAACACAAGAAGATGAAGCAAAAAAAACCGTCGACAAACGAAACCGACAGCAGCGCGCACACGTTTACTACAATCCATTGCGCCAAAGCACGAAGAAGAAACGAACAGAACAACTTGTACTTGAAAGTCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAACACAGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAAACAAGCTAAGAGCAAATATTTACAAACGCAAACAAACAAAGTCTCGCAAAATTGTGCGAGTGCGGTGGATGCGTGAAAAACTCTAGCGTAAGTTAGACGGATTTAGTTGATCGGGCAACAACTGTGTATTGTTTTGCTGTTTTTTTTTTTCGTTCATTTAATTCC--CTTTTTTATTTATTACTTCTGTATTCCCCTCTTACTATTGGTGCGGCAATTGGATTTTGGGCCACTGATTGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTAGCGAGAAAGTTGGCAATTTGGCGATAGAAAACACACCCAACACAAATCAGTAGTACAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAGTCGAATCCATTCGGATCTTTGGCGGAAAGTTATTTGTATGGTTGCCCCAAACCATCGTCTAAAGTGTGCGTAAATTATTTTGGGAGCAAAGAAAAAGGGGAAAAACAGCTTTTTTCGCCTACTTTTCATACCTAATTGGGCGAGTTGATTGTGAAGAGCATTGAGCAAAACCGGCGGGGAACCGCGGTAAATGTTACTATTTCTTATTGATTCGATTCTGATTCGGCATTTGGCATTCCCGCACGCTGTTCATTCGACACTTTGTGATATTTACTCTTTCTCTGTTTGTTGTTTTGTCTTTTTTTCTTTTCTTTTTTTTCCTGTTTTCCAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGCGTGTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGTTAGGACGATACAAAAACAATTAATATACTGCTCCCGCACTCCAAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGAGCTGATTGATGTTTTGTGTGTATTATTTTACGTTTAATATATATGTATGTAGCCGTTACTCGAGTCAACCCCCCCCCCCCCCCGGGGAGGGGCCAGCCCCAGGGGTCGCATAAAAGAAGGGGGGGA]

[+] EMBL BX623902             [GTGAATGTTGGTTCATATATCCCGGTTTAGGATAAAAAAAGAAGGGAAAATTGTCTTTAGATGGTGCTTTACTAGAAGAGTAGTGTTTGCATGGCAGCGTACAGCTAGCGTACCGTGCTTTTTTTGTCCGCTGTATGTGTGTGTGTGTCCGGTGTTTGTTTTGCCTAGTGGTCATGTCAACCCGTGTGTTAGAGTGGAGTGGAGCAGGAAGAGAAAGAGCCTTAGCTCTTAGCTAGCACAGCGGAAGAAGCGCATGTGCGGTGTTGGTAGTGTGGTGCAGCAGGGAAGTAGCACAATGATGCAGTTCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCACACACACCCAGGTTGTTCCTGTCGGAAGGCGTGTGTATGTGTGCACATGCACTAACCGCCATTTACCATTGGGATATGCTCTGCTGCATCACATTTTACACATCAAGAAATTCATCGGTTGTTTTTGTAGATTGTTATACAACACACACACACACACACACCAGATCACTAAGTTGATGTGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCATTCTCTTTCGCCCACCTGCTTGCTGGATGAAATTTGAAACCACTGTGTTTCGAACGTTCTTGCTCTGTGTTGTTATGCGATTTGCTTGAAACCAAGCGTACGCTAAGAGCAACGTAGTAGAGCAAGACAACATTAACGAATGAGCCTCTCTATTGTTGATTGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM654990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgGTGCTTCTCATTCTCTTTCGCCCACCTGCTTGCTGGATGAAATTTGAAACCACTGTGTTTCGAACGTTCTTGCTCTGTGTTGTTATGCGATTTGCTTGAAACCAAGCGTACGCTAAGAGCAACGTAGTAGAGCAAGACAACATTAACGAATGAGCCTCTCTATTGTTGATTGAACCGTTTTTCTTTGTTTTTGTTTTTGTTTAAGTAAACACAAGAAGATGAAGCAAAAAAAACCGTCGACAAACGAAACCGACAGCAGCGCGCACACGTTTACTACAATCCATTGCGCCAAAGCACGAAGAAGAAACGAACAGAACAACTTGTACTTGAAAGTCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAACACAGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAAACAAGCTAAGAGCAAATATTTACAAACGCAAACAAACAAAGTCTCGCAAAATTGTGCGAGTGCGGTGGATGCGTGAAAAACTCTAGCGTAAGTTAGACGGATTTAGTTGATCGGGCAACAACTGTGTATTGTTTTGCTGTTTTTTTTTTTCGTTCATTTAATTCCATTTTTTTTATTTATTACTTCTGTATTCCCCTCTTACTATTGGTGCGGCAATTGGATTTTGGGCCACTGATTGGAGCTTTCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM647074             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccgCGAAACCGACAGCA  GCGCACACGTTTACTACAATCCATTGCGCCAAAGCACGAAGAAGAAACGAACAGAACAACTTGTACTTGAAAGTCGATCGATCGAT      TGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAACACAGCCGCAAGAAGCTGCGTTCAGAGAAAGAGAGA GAAAACAAGCTAAGAGCAAATATTTACAAACGCAAACAAACAAAGTCACGC AAATAGTGCGAGTGCGGTGGATGCGTGAAAAACTCTAGCGTAAGTCAGACGGATTTAGTTGATCGGGCAACAACTGTGTATTGTTTTGCTG TTTTTTTTTTCGTTCATTTAATTCC  CTTTTTTATTTATTACTTCTGTATTCCCCTCTTACTATTGGTGCGGCAATTGGATTTTGGGCCACTGATTGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTAGCGAGAAAGTTGGCAATTTGGCGATAGAAAACACACCCAACACAAATCAGTAGTACAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAGTCGAATCCATTCGGATCTTTGGCGGAAAGTTATTTGTATGGTTGCCCCAAACCATCGTCTAAAGTGTGCGTAAATTATTTTGGGAGCAAAGAAAAAGGGGAAAAACAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM616121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTTCATTTAATTCC  CGCTTTTATTTATTACTTCTGTATTCCCCTCTTACTATTGGTGCGGCAATTGGATTTTGGGCCACTGATTGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTAGCGAGAAAGTTGGCAATTTGGCGATAGAAAACACACCCAACACAAATCAGTAGTACAAACACACACACACACACACACACACACACACACACACACACACACACACACACATACACACACACACACcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08HPV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGTGTGCGTAAATTATTTTGGG GGAAAGAAAAAGGGGAAAAACAGCTTTTTTCGCCTACTTTTCATACCTAATTGGGCGAGTTGATTGTGAAGAGCATTGAGCAAAACCGGCGGGGAACCGCGGTAAATGTTACTATTTCTTATTGATTCGATTCTGATTCGGCATTTGGCATTCCCGCACGCTGTTCATTCGACACTTTGTGATATTTACTCTTTCTCTGTTTGTTGTTTTGTCTTTTTTTCTTTTCTTTTTTTTCCTGTTTTCCAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGCGTGTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGTTAGGACGATACAAAAACAATTAATATACTGCTCCCGCACTCCAAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGAGCTGATTGATGTTTTGTGTGTATTATTTTACGTTTAATATATATGTATGTAGCCGTTACTCGAGTCAACCCCCCCCCCCCCCCGGGGAGGGGCCAGCCCCAGGGGTCGCATAAAAGAAGGGGGGGA]
[+] EMBL BX611003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTCATACCTAATTGGGCGAGTTGATTGTGAAGAGCATTGAGCAAAACCGGCGGGGAACCGCGGTAAATGTTACTATTTCTTACTGATTCGATTCTGATTCGGCATTTGGCATTCCCGCACGCTGTTCATTCGACACTTTGTGATATTTACTCTTTCTCTGTTTGTTGTTTTGTCTTTTTTTCTCTTTTGTTTTTTCCTGTTTTCCAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGC  GTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGTTAGG                                                                                                                                                                                                           ]




>consensus_8033#0
GTGAATGTTGGTTCATATATCCCGGTTTAGGATAAAAAAAGAAGGGAAAATTGTCTTTAG
ATGGTGCTTTACTAGAAGAGTAGTGTTTGCATGGCAGCGTACAGCTAGCGTACCGTGCTT
TTTTTGTCCGCTGTATGTGTGTGTGTGTCCGGTGTTTGTTTTGCCTAGTGGTCATGTCAA
CCCGTGTGTTAGAGTGGAGTGGAGCAGGAAGAGAAAGAGCCTTAGCTCTTAGCTAGCACA
GCGGAAGAAGCGCATGTGCGGTGTTGGTAGTGTGGTGCAGCAGGGAAGTAGCACAATGAT
GCAGTTCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCACACACACCCAGGTTGTTC
CTGTCGGAAGGCGTGTGTATGTGTGCACATGCACTAACCGCCATTTACCATTGGGATATG
CTCTGCTGCATCACATTTTACACATCAAGAAATTCATCGGTTGTTTTTGTAGATTGTTAT
ACAACACACACACACACACACACCAGATCACTAAGTTGATGTGATTTGAATGTGCAATTA
CCCCCAATGTGCTTCTCATTCTCTTTCGCCCACCTGCTTGCTGGATGAAATTTGAAACCA
CTGTGTTTCGAACGTTCTTGCTCTGTGTTGTTATGCGATTTGCTTGAAACCAAGCGTACG
CTAAGAGCAACGTAGTAGAGCAAGACAACATTAACGAATGAGCCTCTCTATTGTTGATTG
AACCGTTTTTCTTTGTTTTTGTTTTTGTTTAAGTAAACACAAGAAGATGAAGCAAAAAAA
ACCGTCGACAAACGAAACCGACAGCAGCGCGCACACGTTTACTACAATCCATTGCGCCAA
AGCACGAAGAAGAAACGAACAGAACAACTTGTACTTGAAAGTCGATCGATTGTTTTTTGC
TGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAACACAGCCGCAAGAAGCTGCGTT
CAGAGAAGGAGAGACAAAAACAAGCTAAGAGCAAATATTTACAAACGCAAACAAACAAAG
TCTCGCAAAATTGTGCGAGTGCGGTGGATGCGTGAAAAACTCTAGCGTAAGTTAGACGGA
TTTAGTTGATCGGGCAACAACTGTGTATTGTTTTGCTGTTTTTTTTTTTCGTTCATTTAA
TTCCCTTTTTTATTTATTACTTCTGTATTCCCCTCTTACTATTGGTGCGGCAATTGGATT
TTGGGCCACTGATTGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTAGCGAGAAAGT
TGGCAATTTGGCGATAGAAAACACACCCAACACAAATCAGTAGTACAAACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACAAGTCGAATCCATTCGGATCTTTGGCGGAAAGTTATTTGTATGG
TTGCCCCAAACCATCGTCTAAAGTGTGCGTAAATTATTTTGGGAGCAAAGAAAAAGGGGA
AAAACAGCTTTTTTCGCCTACTTTTCATACCTAATTGGGCGAGTTGATTGTGAAGAGCAT
TGAGCAAAACCGGCGGGGAACCGCGGTAAATGTTACTATTTCTTATTGATTCGATTCTGA
TTCGGCATTTGGCATTCCCGCACGCTGTTCATTCGACACTTTGTGATATTTACTCTTTCT
CTGTTTGTTGTTTTGTCTTTTTTTCTTTTCTTTTTTTTCCTGTTTTCCAACTTTTTCCTT
TTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGCGTGTGTGTGTGTGACAAAAT
GCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATTGAACACACACA
CGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGTTGGTAGATGCG
CTCTTCCACGAGGGTTGTTAGGACGATACAAAAACAATTAATATACTGCTCCCGCACTCC
AAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGAGCTGATTGATGTTTTGTGTGT
ATTATTTTACGTTTAATATATATGTATGTAGCCGTTACTCGAGTCAACCCCCCCCCCCCC
CCGGGGAGGGGCCAGCCCCAGGGGTCGCATAAAAGAAGGGGGGGA

consensusID : consensus_8033#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGATGATGCAGATCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCACACACACACACCCAGGTTGTTCCTGTCGGAAGGCGCACGTGTGTGTGTGCGCATGCTCTAACCGCCATTTACCATTGGGATATGCTCTGCTGCATCACATTTTCCACATCAAGAAATTCATCGGTTGTTTTTGTAGATTGTTATACAACACACACACACCAGATCACTAAGTTGATGTGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCATTCTCTTTCGCCCACCTGCTTGCTGGATGAAATTTGAAACCACTGTGTTTTGAACGTTCTTGCTCTGTGTTGTTATGCGATTTGCTTGAAACCAAGCGTACGCTAAGAGTAACGTAGTAGAGCAAGACAACATTAACGAATGAGCCTCTCTATTGTTGATTGAACCGTTTTTTTTTTGTTTTTGTTTAAGTAAACACAAGAAGATGAAGTAACAAAAAACCGTCGACAAACGAAACCGACAGCAGCGCACACGTTTACTACAATCCATTGCGCCAAAGCACGAAGAAGAAATGAACAACTTGTACTTGAAAGTCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAAAACAGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAA]

[+] EMBL BM595752             [CCGCCCACGCGTCCGCCCACGCGTCCGATGATGCAGATCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCACACACACACACCCAGGTTGTTCCTGTCGGAAGGCGCACGTGTGTGTGTGCGCATGCTCTAACCGCCATTTACCATTGGGATATGCTCTGCTGCATCACATTTTCCACATCAAGAAATTCATCGGTTGTTTTTGTAGATTGTTATACAACACACACACACCAGATCACTAAGTTGATGTGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCATTCTCTTTCGCCCACCTGCTTGCTGGATGAAATTTGAAACCACTGTGTTTTGAACGTTCTTGCTCTGTGTTGTTATGCGATTTGCTTGAAACCAAGCGTACGCTAAGAGTAACGTAGTAGAGCAAGACAACATTAACGAATGAGCCTCTCTATTGTTGATTGAACCGTTTTTTTTTTGTTTTTGTTTAAGTAAACACAAGAAGATGAAGTAACAAAAAACCGTCGACAAACGAAACCGACAGCAGCGCACACGTTTACTACAATCCATTGCGCCAAAGCACGAAGAAGAAATGAACAACTTGTACTTGAAAGTCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAAAACAGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAA]




>consensus_8033#1
CCGCCCACGCGTCCGCCCACGCGTCCGATGATGCAGATCCTCAAAAGCAAAATCAAACTC
TCTTGTGCACCGCACACACACACACCCAGGTTGTTCCTGTCGGAAGGCGCACGTGTGTGT
GTGCGCATGCTCTAACCGCCATTTACCATTGGGATATGCTCTGCTGCATCACATTTTCCA
CATCAAGAAATTCATCGGTTGTTTTTGTAGATTGTTATACAACACACACACACCAGATCA
CTAAGTTGATGTGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCATTCTCTTTCGCC
CACCTGCTTGCTGGATGAAATTTGAAACCACTGTGTTTTGAACGTTCTTGCTCTGTGTTG
TTATGCGATTTGCTTGAAACCAAGCGTACGCTAAGAGTAACGTAGTAGAGCAAGACAACA
TTAACGAATGAGCCTCTCTATTGTTGATTGAACCGTTTTTTTTTTGTTTTTGTTTAAGTA
AACACAAGAAGATGAAGTAACAAAAAACCGTCGACAAACGAAACCGACAGCAGCGCACAC
GTTTACTACAATCCATTGCGCCAAAGCACGAAGAAGAAATGAACAACTTGTACTTGAAAG
TCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAAAAC
AGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAA

consensusID : consensus_8033#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence

                              [CAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGCGTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGTTAGGACGATAGAAAAACAATTAATATACTGCTCCCGCACTCCAAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGAGCTGATTGATGTTTTGTGTGTATTATTTTACGTTTAATATATATGTATGTAGCCGTTACTCGAGTCAAAACCCCCTTTACCCCCCCTCCCCCGCTACCCTTTCCAATTGTTAATATTTTAACAAACTTTATATTTAAGACAGTAAAACGCGCGTCTACAACACGTTTAGTGTGTGTGACGGGACAAGAATAAATT]

[+] EMBL BX609089             [CAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGCGTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGTTAGGACGATAGAAAAACAATTAATATACTGCTCCCGCACTCCAAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGAGCTGATTGATGTTTTGTGTGTATTATTTTACGTTTAATATATATGTATGTAGCCGTTACTCGAGTCAAAACCCCCTTTACCCCCCCTCCCCCGCTACCCTTTCCAATTGTTAATATTTTAACAAACTTTATATTTAAGACAGTAAAACGCGCGTCTACAACACGTTTAGTGTGTGTGACGGGACAAGAATAAATT]




>consensus_8033#2
CAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTGCGTGTGTG
TGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTCTTATTTATT
GAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTAGATGCAAGT
TGGTAGATGCGCTCTTCCACGAGGGTTGTTAGGACGATAGAAAAACAATTAATATACTGC
TCCCGCACTCCAAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGAGCTGATTGAT
GTTTTGTGTGTATTATTTTACGTTTAATATATATGTATGTAGCCGTTACTCGAGTCAAAA
CCCCCTTTACCCCCCCTCCCCCGCTACCCTTTCCAATTGTTAATATTTTAACAAACTTTA
TATTTAAGACAGTAAAACGCGCGTCTACAACACGTTTAGTGTGTGTGACGGGACAAGAAT
AAATT

consensusID : consensus_8033#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 353
fasta sequence

                              [CCGGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTATGCGAGAAAGTTGGCAATTTGGCGATAGAAAACACACCCAACACAAATGGGGAGTACAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACACACACACACACACACACGCACACACACACACACACACACAAATCGAATCCATTCGGATCTTTGGCGGAAAGTCATTTGTATGGGTGCCCCAAACCATCGCCTAAAGTGTGCGTAAATTATTTTGGGGGCAAAGAAAAAGGGGAAAAACAGCTTTTTCCGCTAACTTTTCATACCTA]

[+] EMBL BM590062             [CCGGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTATGCGAGAAAGTTGGCAATTTGGCGATAGAAAACACACCCAACACAAATGGGGAGTACAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACACACACACACACACACACGCACACACACACACACACACACAAATCGAATCCATTCGGATCTTTGGCGGAAAGTCATTTGTATGGGTGCCCCAAACCATCGCCTAAAGTGTGCGTAAATTATTTTGGGGGCAAAGAAAAAGGGGAAAAACAGCTTTTTCCGCTAACTTTTCATACCTA]




>consensus_8033#3
CCGGGAGCTTTCCTTTCTCTCTCCTACGAAAGAGGACTATGCGAGAAAGTTGGCAATTTG
GCGATAGAAAACACACCCAACACAAATGGGGAGTACAAACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACTCACACACACACACACAC
ACACACACACACACGCACACACACACACACACACACAAATCGAATCCATTCGGATCTTTG
GCGGAAAGTCATTTGTATGGGTGCCCCAAACCATCGCCTAAAGTGTGCGTAAATTATTTT
GGGGGCAAAGAAAAAGGGGAAAAACAGCTTTTTCCGCTAACTTTTCATACCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8033#0      GTGAATGTTGGTTCATATATCCCGGTTTAGGATAAAAAAAGAAGGGAAAATTGTCTTTAG 60
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      ATGGTGCTTTACTAGAAGAGTAGTGTTTGCATGGCAGCGTACAGCTAGCGTACCGTGCTT 120
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TTTTTGTCCGCTGTATGTGTGTGTGTGTCCGGTGTTTGTTTTGCCTAGTGGTCATGTCAA 180
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CCCGTGTGTTAGAGTGGAGTGGAGCAGGAAGAGAAAGAGCCTTAGCTCTTAGCTAGCACA 240
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      GCGGAAGAAGCGCATGTGCGGTGTTGGTAGTGTGGTGCAGCAGGGAAGTAGCACAATGAT 300
consensus_8033#1      ---------------------------CCGC-CCACGCGTCCGCCCACGCGTCCGATGAT 32
consensus_8033#3      ------------------------------CCGGGAGCTTTCCTTTCTCTCTCCTACGAA 30
consensus_8033#2      ---------CAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGT 51
                                                           *                      

consensus_8033#0      GCAGTTCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCA-CACACAC----CCAGGT 355
consensus_8033#1      GCAGATCCTCAAAAGCAAAATCAAACTCTCTTGTGCACCGCA-CACACACACACCCAGGT 91
consensus_8033#3      AGAGGACTATGCGAGAAAGTTGGCAATTTGGCG-ATAGAAAA-CACACCCA-ACACAAAT 87
consensus_8033#2      GCGTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACTC 111
                                   *  **        * *   *        *  **** *     **   

consensus_8033#0      TGTTCCTGTCGGAAGGCGT--GTGTATGTGT----------GCACATGCACTAACCGCCA 403
consensus_8033#1      TGTTCCTGTCGGAAGGCGCACGTGTGTGTGT----------GCGCATGCTCTAACCGCCA 141
consensus_8033#3      GGGGAGTACAAACACACACACACACACACAC----------ACACACACACACACACACA 137
consensus_8033#2      TTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGTA 171
                                   *  *                           *   *          *

consensus_8033#0      TTTAC-CATTGGGATATGCTCTGCTGCATCACATTTTA-CACATCAAGAAATTCATCGGT 461
consensus_8033#1      TTTAC-CATTGGGATATGCTCTGCTGCATCACATTTTC-CACATCAAGAAATTCATCGGT 199
consensus_8033#3      CACACACACACACACACACACACACTCA-CACACACACACACACACACACACACA-CACG 195
consensus_8033#2      GATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGT-TAGGACGATAGAAAAACAATT 230
                          *        * *  * *     **  *         *     * * *   *     

consensus_8033#0      TGTTTTTGTAGATTGTTATACAACACACACACACACACACACCAGATCACTAAGTTGATG 521
consensus_8033#1      TGTTTTTGTAGATTGTTATACAACACACACACA--------CCAGATCACTAAGTTGATG 251
consensus_8033#3      CACACACACACACACACACACAAATCGAATCCAT-------TCGGATCTTTGGCGGAAAG 248
consensus_8033#2      AATATAC-TGCTCCCGCACTCCAAACATAAATAT-------TCCCTTCCCAATCTATCCC 282
                                       *  * *  *  *   *         *   **            

consensus_8033#0      TGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCAT-TCTCTTTCGCCCACCTGCTTG 580
consensus_8033#1      TGATTTGAATGTGCAATTACCCCCAATGTGCTTCTCAT-TCTCTTTCGCCCACCTGCTTG 310
consensus_8033#3      TCATTTGTATGGG----TGCCCCAAACCATCGCCTAAAGTGTGCGTAAATTATTTTGGGG 304
consensus_8033#2      CTTTTTGAGCTGATTGATGTTTTGTGTGTATTATTT---TACGTTTAATATATATGTATG 339
                         ****          *                *    *     *     *  *    *

consensus_8033#0      CTGGATGAAATTTGAAACCACTGTGTTTCGAACGTTCTTGCTCTGTGTTGTTATGCGATT 640
consensus_8033#1      CTGGATGAAATTTGAAACCACTGTGTTTTGAACGTTCTTGCTCTGTGTTGTTATGCGATT 370
consensus_8033#3      GCAAAGAAAAAGGGGAAAAACAGCTTTTTCCGCTAACTTTTCATACCTA----------- 353
consensus_8033#2      -TAGCCGTTACTCGAGTCAAAACCCCCTTTACCCCCCCTCCCCCGC-TACCCTTTCCAAT 397
                               *   *     *       *    *   * *        *            

consensus_8033#0      TGCTTGAAACCAAGCGTACGCTAAGAGCAACGTAGTAGAGCAAGACAACATTAACGAATG 700
consensus_8033#1      TGCTTGAAACCAAGCGTACGCTAAGAGTAACGTAGTAGAGCAAGACAACATTAACGAATG 430
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      TGTTAATATTTTAACAAACTTTATATTTAAGACAGTAAAACGCGCGTCTACAACACGTTT 457
                                                                                  

consensus_8033#0      AGCCTCTCTATTGTTGATTGAACCGTTTTTCTTTGTTTTTGTTTTTGTTTAAGTAAACAC 760
consensus_8033#1      AGCCTCTCTATTGTTGATTGAACCGTTTTT-----TTTTTGTTTTTGTTTAAGTAAACAC 485
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      AGTGTGTGTGACGGGACAAGAATAAATT-------------------------------- 485
                                                                                  

consensus_8033#0      AAGAAGATGAAGCAA-AAAAAACCGTCGACAAACGAAACCGACAGCAGCGCGCACACGTT 819
consensus_8033#1      AAGAAGATGAAGTAACAAAAAACCGTCGACAAACGAAACCGACAGCAGCGC--ACACGTT 543
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TACTACAATCCATTGCGCCAAAGCACGAAGAAGAAACGAACAGAACAACTTGTACTTGAA 879
consensus_8033#1      TACTACAATCCATTGCGCCAAAGCACGAAGAAGAAATG-----AACAACTTGTACTTGAA 598
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      AGTCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAAC 939
consensus_8033#1      AGTCGATCGATTGTTTTTTGCTGTGGAAAATTATCTACCAAAGCGAACGGGCGCGCGAAA 658
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      ACAGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAAACAAGCTAAGAGCAAATATT 999
consensus_8033#1      ACAGCCGCAAGAAGCTGCGTTCAGAGAAGGAGAGACAAAA-------------------- 698
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TACAAACGCAAACAAACAAAGTCTCGCAAAATTGTGCGAGTGCGGTGGATGCGTGAAAAA 1059
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CTCTAGCGTAAGTTAGACGGATTTAGTTGATCGGGCAACAACTGTGTATTGTTTTGCTGT 1119
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TTTTTTTTTTCGTTCATTTAATTCCCTTTTTTATTTATTACTTCTGTATTCCCCTCTTAC 1179
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TATTGGTGCGGCAATTGGATTTTGGGCCACTGATTGGAGCTTTCCTTTCTCTCTCCTACG 1239
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      AAAGAGGACTAGCGAGAAAGTTGGCAATTTGGCGATAGAAAACACACCCAACACAAATCA 1299
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      GTAGTACAAACACACACACACACACACACACACACACACACACACACACACACACACACA 1359
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CACACACACACACACACACACACACACACACACACACAAGTCGAATCCATTCGGATCTTT 1419
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      GGCGGAAAGTTATTTGTATGGTTGCCCCAAACCATCGTCTAAAGTGTGCGTAAATTATTT 1479
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TGGGAGCAAAGAAAAAGGGGAAAAACAGCTTTTTTCGCCTACTTTTCATACCTAATTGGG 1539
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CGAGTTGATTGTGAAGAGCATTGAGCAAAACCGGCGGGGAACCGCGGTAAATGTTACTAT 1599
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TTCTTATTGATTCGATTCTGATTCGGCATTTGGCATTCCCGCACGCTGTTCATTCGACAC 1659
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      TTTGTGATATTTACTCTTTCTCTGTTTGTTGTTTTGTCTTTTTTTCTTTTCTTTTTTTTC 1719
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CTGTTTTCCAACTTTTTCCTTTTCTACAATTACATTCTGTTGTGGTTTTGTTTGTGTGTG 1779
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CGTGTGTGTGTGTGACAAAATGCGTTTTCTGTCGTACTCTTCAGTACACACAAAACCACT 1839
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CTTATTTATTGAACACACACACGCATTCAGTTTGATATTACGGTTCGTTCTGTTCTTGGT 1899
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      AGATGCAAGTTGGTAGATGCGCTCTTCCACGAGGGTTGTTAGGACGATACAAAAACAATT 1959
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      AATATACTGCTCCCGCACTCCAAACATAAATATTCCCTTCCCAATCTATCCCCTTTTTGA 2019
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      GCTGATTGATGTTTTGTGTGTATTATTTTACGTTTAATATATATGTATGTAGCCGTTACT 2079
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      CGAGTCAACCCCCCCCCCCCCCCGGGGAGGGGCCAGCCCCAGGGGTCGCATAAAAGAAGG 2139
consensus_8033#1      ------------------------------------------------------------
consensus_8033#3      ------------------------------------------------------------
consensus_8033#2      ------------------------------------------------------------
                                                                                  

consensus_8033#0      GGGGGA 2145
consensus_8033#1      ------
consensus_8033#3      ------
consensus_8033#2      ------