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Anopheles gambiae
cluster # 8037 cluster # 8037       Sequences # 9       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8037#0 length = 796 sequences # 4  
consensus_8037#1 length = 743 sequences # 1  
consensus_8037#2 length = 680 sequences # 1  
consensus_8037#3 length = 641 sequences # 1  
consensus_8037#4 length = 599 sequences # 1  
consensus_8037#5 length = 531 sequences # 1  

consensusID : consensus_8037#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 796
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCACAGTTTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTTCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACCCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGAATCGAAGCCAAGAAGCAGACGGAAACGGCAAGACGCAAGCAAAAGCTGCAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGCTAAACCAAATGGCGGGTAGTCTTTAATAAACGCTT]

[+] EMBL BM616150             [CCGCCCACGCGTCCGCCCACGCGTCCGCACAGTTTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTTCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACCCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGAATCGAAGCCAA                                                                                                                                    ]
[+] EMBL BM594833             [                                          ccGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGATCACAGCCGGTTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGGATCGAAGCCAAGAAGCAGACGGAAACGG                                                                                                                   ]
[+] EMBL BX624029             [                                                                                    AATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGATCACAGCCGGTTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGT                                                                                                                                                                      ]
[+] EMBL BX623515             [                                                                                                                  GCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTTCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACCCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGAATCGAAGCCAAGAAGCAGACGGAAACGGCAAGACGCAAGCAAAAGCTGCAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGCTAAACCAAATGGCGGGTAGTCTTTAATAAACGCTT]


>consensus_8037#0 CCGCCCACGCGTCCGCCCACGCGTCCGCACAGTTTTTGCGGAAGGGACGCGTGTGTTTTG TGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGT GCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGA CTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAA AGAGATTGAATTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATA ACATGCTCGGCCTGCTGCGATGTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTT TCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTGCCGGTGC TGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAG TTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGT GCCACACAACCCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCA AGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGAATCGAAG CCAAGAAGCAGACGGAAACGGCAAGACGCAAGCAAAAGCTGCAGGCAAAGAAAAAGGCTT GGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGCTAAACCAAATGGCGGGTAG TCTTTAATAAACGCTT



consensusID : consensus_8037#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 743
fasta sequence
                              [GGCAGAATCGCGCACGAGGCGGAAAGGGAAATCTGCGTTTCACACAGTGTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGACGCGAATTTCGCCAGTCGGCATCACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGGTAACACCGACGGCACTGTCCCGTTTTTGCACCGTGTCACCGTGAATTCGATTATACTTTCAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGGCTGCTGCGATTTGTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCATGGCAACGATGCCTCTCGAAAGCCATCGATCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTCCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAAGCGACCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAAATCGTCGGCGAAGCGCGCAAAGATGCTGATCGGNAAGCTGGACCCAACTGTTACNATGGCGGATCAGATCGGTGNAGGCGACAAATTCCAGGCGGAA]

[+] EMBL BX467578             [GGCAGAATCGCGCACGAGGCGGAAAGGGAAATCTGCGTTTCACACAGTGTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGACGCGAATTTCGCCAGTCGGCATCACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGGTAACACCGACGGCACTGTCCCGTTTTTGCACCGTGTCACCGTGAATTCGATTATACTTTCAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGGCTGCTGCGATTTGTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCATGGCAACGATGCCTCTCGAAAGCCATCGATCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTCCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAAGCGACCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAAATCGTCGGCGAAGCGCGCAAAGATGCTGATCGGNAAGCTGGACCCAACTGTTACNATGGCGGATCAGATCGGTGNAGGCGACAAATTCCAGGCGGAA]


>consensus_8037#1 GGCAGAATCGCGCACGAGGCGGAAAGGGAAATCTGCGTTTCACACAGTGTTTGCGGAAGG GACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTC GACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCA GCACACCGACCAGGACTACTTTCTCAACCGCATTAGACGCGAATTTCGCCAGTCGGCATC ACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGGTAACACCGACGGCACTGTCCCG TTTTTGCACCGTGTCACCGTGAATTCGATTATACTTTCAGCGAGGACGCGCTCTACTCGA TCGGGCCCGGGTGATATAACATGCTCGGGCTGCTGCGATTTGTCGCTCTTGAATCGACCG CACAGTGGAAGGCTCTTTCCGCATCCCCATGGCAACGATGCCTCTCGAAAGCCATCGATC ACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTCCGGGGCAGTG GACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAAGCGA CCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAAATCGTCGGCGAAGC GCGCAAAGATGCTGATCGGNAAGCTGGACCCAACTGTTACNATGGCGGATCAGATCGGTG NAGGCGACAAATTCCAGGCGGAA



consensusID : consensus_8037#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence
                              [CCGCAAAACAACGCGCGTTCGTGAAAGGGGGTTTGGGAAGGTTATCTTCGTTTCACACAGTTTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTTCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACCCGGTCGCTGGTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGGGGAAGGCGCAACTCCAGC]

[+] EMBL BM586742             [CCGCAAAACAACGCGCGTTCGTGAAAGGGGGTTTGGGAAGGTTATCTTCGTTTCACACAGTTTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTTCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACCCGGTCGCTGGTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGGGGAAGGCGCAACTCCAGC]


>consensus_8037#2 CCGCAAAACAACGCGCGTTCGTGAAAGGGGGTTTGGGAAGGTTATCTTCGTTTCACACAG TTTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATATAAAATGAACG TAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACG GCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTC GCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAGCGAGGACGCG CTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATGTGCCGCTCTT GAATCGACCGCACAGTGGAAGGCTCTTTTCGCATCCCCATGGCGACGATGCCTCTCGAAA GTCGTCGACCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATCTGGAGGAATCGTTCGTG CGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACG CACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACCCGGTCGCTGGTTGAGAATCGT CGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCG GGGGAAGGCGCAACTCCAGC



consensusID : consensus_8037#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence
                              [TCGGCACGAGGGGGANTTCTTCATTCTCAGTCAGTTTTTGCGGAAGGGACGCGTGTGTTTTGNTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATTTGTCGCTCTTGAATCGACCGCACAGTTGAAGGCTCTTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGATCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATTTGGAGGAATCGTTNCGTCCGGGGCAGTGGCCCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCNGTCGCTGTNNTGAGAATCGTCCCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCACTTGTACAATGGCGATCAGTCGGTGG]

[+] EMBL BX619459             [TCGGCACGAGGGGGANTTCTTCATTCTCAGTCAGTTTTTGCGGAAGGGACGCGTGTGTTTTGNTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGGCCTGCTGCGATTTGTCGCTCTTGAATCGACCGCACAGTTGAAGGCTCTTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGATCACAGCCGGGTGCCGGTGCTGCGCGATGAAGATTTGGAGGAATCGTTNCGTCCGGGGCAGTGGCCCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCNGTCGCTGTNNTGAGAATCGTCCCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCACTTGTACAATGGCGATCAGTCGGTGG]


>consensus_8037#3 TCGGCACGAGGGGGANTTCTTCATTCTCAGTCAGTTTTTGCGGAAGGGACGCGTGTGTTT TGNTGTAACACCACAAACCTAATATAAAATGAACGTAGTACCGGCCTCGACCAAGCGGCT GGTGCTTTCGTTATATCGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCA GGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTCACTGACCGACCC GAAAGAGATTGAGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGAT ATAACATGCTCGGCCTGCTGCGATTTGTCGCTCTTGAATCGACCGCACAGTTGAAGGCTC TTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGATCACAGCCGGGTGCCGG TGCTGCGCGATGAAGATTTGGAGGAATCGTTNCGTCCGGGGCAGTGGCCCGGGTGGACAG GCAGTTGCCAAGACCAACAACAAGGTGGTGCTGACGCACAAACCGACCGGGATCGTCGTG CAGTGCCACACAACGCNGTCGCTGTNNTGAGAATCGTCCCGAAGCGCGCAAGATGCTGAT CGGCAAGCTGGACCACTTGTACAATGGCGATCAGTCGGTGG



consensusID : consensus_8037#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [AGGCAGAATTGCCACGAGGNAGGCTGGTGCTTTCGTATATATGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTACACTAGACCGACCCGAAAGAGATATGACGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGTGGCTGCTGCGATGTGGCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTACCGCCATCCCCATGGCGACGCATGCCTCTCGAAAGTCGTACGACCACAGCCGGGTACCGGCTGCCTGCGCGCATGCACAGCATCTGGAAGGCAAATACGCTCTCGCTAGNCGCGCGGCCAGCNGGACCGGGCTGGNACAGGCGAGCTACGGCCAAGANCGAAGCAACACGGGCTGGTGNCTGACCCGCACACACACCCCGNACCCCGNCNACTCCGCTCCCCNGCCCNCCCTGCCCCACCACCAAANCCGCCGCGCCACCGCCCCTGGCNCCAGACCANACCTCCGCTCCCGCCGCAAGCGGCGCCAAGATTGCCTGATCGGCGA]

[+] EMBL AL934721             [AGGCAGAATTGCCACGAGGNAGGCTGGTGCTTTCGTATATATGCGATTTGCTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTCGCCAGTCGGCGTACACTAGACCGACCCGAAAGAGATATGACGTTCTGCTACAAGCGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGTGGCTGCTGCGATGTGGCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTACCGCCATCCCCATGGCGACGCATGCCTCTCGAAAGTCGTACGACCACAGCCGGGTACCGGCTGCCTGCGCGCATGCACAGCATCTGGAAGGCAAATACGCTCTCGCTAGNCGCGCGGCCAGCNGGACCGGGCTGGNACAGGCGAGCTACGGCCAAGANCGAAGCAACACGGGCTGGTGNCTGACCCGCACACACACCCCGNACCCCGNCNACTCCGCTCCCCNGCCCNCCCTGCCCCACCACCAAANCCGCCGCGCCACCGCCCCTGGCNCCAGACCANACCTCCGCTCCCGCCGCAAGCGGCGCCAAGATTGCCTGATCGGCGA]


>consensus_8037#4 AGGCAGAATTGCCACGAGGNAGGCTGGTGCTTTCGTATATATGCGATTTGCTTCGGTACG GCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAATTTC GCCAGTCGGCGTACACTAGACCGACCCGAAAGAGATATGACGTTCTGCTACAAGCGAGGA CGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGTGGCTGCTGCGATGTGGCG CTCTTGAATCGACCGCACAGTGGAAGGCTCTTTACCGCCATCCCCATGGCGACGCATGCC TCTCGAAAGTCGTACGACCACAGCCGGGTACCGGCTGCCTGCGCGCATGCACAGCATCTG GAAGGCAAATACGCTCTCGCTAGNCGCGCGGCCAGCNGGACCGGGCTGGNACAGGCGAGC TACGGCCAAGANCGAAGCAACACGGGCTGGTGNCTGACCCGCACACACACCCCGNACCCC GNCNACTCCGCTCCCCNGCCCNCCCTGCCCCACCACCAAANCCGCCGCGCCACCGCCCCT GGCNCCAGACCANACCTCCGCTCCCGCCGCAAGCGGCGCCAAGATTGCCTGATCGGCGA



consensusID : consensus_8037#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 531
fasta sequence
                              [GCGGAATTCCTCGAGCACTGTTGGCCAACTGGCGGGCCCGGGTGATATTACATGCTCGGGCTGCTGCGTTTTTTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTACCGGTGTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGGTTACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGGATCGAAGCCAAGAAGCAGACGGAAACGGCGAGACGCAAGCAAAAGCTGCAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGCTACTCCCAATGGCGGGTAGTTTTA]

[-] EMBL CNS08MJQ             [GCGGAATTCCTCGAGCACTGTTGGCCAACTGGCGGGCCCGGGTGATATTACATGCTCGGGCTGCTGCGTTTTTTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCATGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTACCGGTGTGCGCGATGAAGATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCAACAACAAGGTGGGTTACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTGTACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGGATCGAAGCCAAGAAGCAGACGGAAACGGCGAGACGCAAGCAAAAGCTGCAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGCTACTCCCAATGGCGGGTAGTTTTA]


>consensus_8037#5 GCGGAATTCCTCGAGCACTGTTGGCCAACTGGCGGGCCCGGGTGATATTACATGCTCGGG CTGCTGCGTTTTTTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTCCGCATCCCCA TGGCGACGATGCCTCTCGAAAGTCGTCGACCACAGCCGGGTACCGGTGTGCGCGATGAAG ATCTGGAGGAATCGTTCGTGCGGGGCAGTGGACCGGGTGGACAGGCAGTTGCCAAGACCA ACAACAAGGTGGGTTACGCACAAACCGACCGGGATCGTCGTGCAGTGCCACACAACGCGG TCGCTGTTTGAGAATCGTCGCGAAGCGCGCAAGATGCTGATCGGCAAGCTGGACCAACTG TACAATGGCGATCAGTCGGTGGAGGCGCAACTCCAGCGGATCGAAGCCAAGAAGCAGACG GAAACGGCGAGACGCAAGCAAAAGCTGCAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAA TTTGGTGACGAGTCGGACAAGAGTAGCTACTCCCAATGGCGGGTAGTTTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8037#1      -----------GGCAGAATCGCGCACGAGGCG--GAAAGGGAAATCTGCGTT-TCACACA 46
consensus_8037#3      ------------------TCG-GCACGAGG--------GGGANTTCTTCATTCTCAGTCA 33
consensus_8037#2      CCGCAAAACAACGCGCGTTCGTGAAAGGGGGTTTGGGAAGGTTATCTTCGTT-TCACACA 59
consensus_8037#4      ------------------------------------------------------------
consensus_8037#0      ------------------------------------------------------------
consensus_8037#5      ------------------------------------------------------------
                                                                                  

consensus_8037#1      GTGTTTGCGGAAGGGACGCGTGTGTTTTGT-GTAACACCACAAACCTAATATAAAATGAA 105
consensus_8037#3      GTTTTTGCGGAAGGGACGCGTGTGTTTTGNTGTAACACCACAAACCTAATATAAAATGAA 93
consensus_8037#2      GTTTTTGCGGAAGGGACGCGTGTGTTTTGT-GTAACACCACAAACCTAATATAAAATGAA 118
consensus_8037#4      -----------------------------------------------------------A 1
consensus_8037#0      --------------------------------------CCGCCCACGCGTCCGCCCACGC 22
consensus_8037#5      ------------------------------------------------------------
                                                                                  

consensus_8037#1      CGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGT-TATATCGCGATTTGCTTCGGT 164
consensus_8037#3      CGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGT-TATATCGCGATTTGCTTCGGT 152
consensus_8037#2      CGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGT-TATATCGCGATTTGCTTCGGT 177
consensus_8037#4      GGCAGAATTG-CCACGAGGNAG--GCTGGTGCTTTCGTATATAT-GCGATTTGCTTCGGT 57
consensus_8037#0      GTCCGCACAGTTTTTGCGGAAGGGACGCGTGTGTTTTGTGTAACACCACAAACCTAATAT 82
consensus_8037#5      ------------------------------------------------------------
                                                                                  

consensus_8037#1      ACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGACGCGAAT 224
consensus_8037#3      ACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAAT 212
consensus_8037#2      ACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAAT 237
consensus_8037#4      ACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGGCGCGAAT 117
consensus_8037#0      AAAATGAACGTAGTACCGGCCTCGACCAAGCGGCTGGTGCTTTCGTTATATCGCGATTTG 142
consensus_8037#5      ------------------------------------------------------------
                                                                                  

consensus_8037#1      TTCGCCAGTCGGCAT-CACT-GACCGACCCGAAAGAGAT-TGA-GTTCTGCTACAAGGTA 280
consensus_8037#3      TTCGCCAGTCGGCGT-CACT-GACCGACCCGAAAGAGAT-TGA-GTTCTGCTACAAG--- 265
consensus_8037#2      TTCGCCAGTCGGCGT-CACT-GACCGACCCGAAAGAGAT-TGA-ATTCTGCTACAAG--- 290
consensus_8037#4      TTCGCCAGTCGGCGTACACTAGACCGACCCGAAAGAGATATGACGTTCTGCTACAAG--- 174
consensus_8037#0      CTTCGGTACGGCGCCCAGCTGCAGCACACCGACCAGGACTACTTTCTCAACCGCATTAGG 202
consensus_8037#5      ------------------------------------------------------------
                                                                                  

consensus_8037#1      ACACCGACGGCACTGTCCCGTTTTTGCACCGTGTCACCGTGAATTCGATTATACTTTCAG 340
consensus_8037#3      ------------------------------------------------------------
consensus_8037#2      ------------------------------------------------------------
consensus_8037#4      ------------------------------------------------------------
consensus_8037#0      CGCGAATTTCGCCAGTCGGCGTCACTGACCGACCCGAAAGAGATTGAATTCTGCTACAAG 262
consensus_8037#5      ------------------------------------------GCGGAATTCCTCGAGCAC 18
                                                                                  

consensus_8037#1      CGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCG-GGCTGCTGCGAT 399
consensus_8037#3      CGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCG-GCCTGCTGCGAT 324
consensus_8037#2      CGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCG-GCCTGCTGCGAT 349
consensus_8037#4      CGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCGTGGCTGCTGCGAT 234
consensus_8037#0      CGAGGACGCGCTCTACTCGATCGGGCCCGGGTGATATAACATGCTCG-GCCTGCTGCGAT 321
consensus_8037#5      TGTTGGC-----CAACTGG--CGGGCCCGGGTGATATTACATGCTCG-GGCTGCTGCGTT 70
                       *  * *     * *** *  **************** ********* * ******** *

consensus_8037#1      TTGTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTT-CCGC-ATCCCCATGGCAACG 457
consensus_8037#3      TTGTCGCTCTTGAATCGACCGCACAGTTGAAGGCTCTTT-CCGC-ATCCCCATGGCGACG 382
consensus_8037#2      GTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTT-TCGC-ATCCCCATGGCGACG 407
consensus_8037#4      GTGGCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTTACCGCCATCCCCATGGCGACG 294
consensus_8037#0      GTGCCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTT-TCGC-ATCCCCATGGCGACG 379
consensus_8037#5      TTTTCGCTCTTGAATCGACCGCACAGTGGAAGGCTCTTT-CCGC-ATCCCCATGGCGACG 128
                       *  *********************** ***********  *** *********** ***

consensus_8037#1      -ATGCCTCTCGAAAGCCAT-CGATCACAGCCGGGTGCCGGTG--CTGCGCG-ATG---AA 509
consensus_8037#3      -ATGCCTCTCGAAAGTCGT-CGATCACAGCCGGGTGCCGGTG--CTGCGCG-ATG---AA 434
consensus_8037#2      -ATGCCTCTCGAAAGTCGT-CGACCACAGCCGGGTGCCGGTG--CTGCGCG-ATG---AA 459
consensus_8037#4      CATGCCTCTCGAAAGTCGTACGACCACAGCCGGGTACCGGCTGCCTGCGCGCATGCACAG 354
consensus_8037#0      -ATGCCTCTCGAAAGTCGT-CGACCACAGCCGGGTGCCGGTGC--TGCGCG-ATG---AA 431
consensus_8037#5      -ATGCCTCTCGAAAGTCGT-CGACCACAGCCGGGTACCGGTG---TGCGCG-ATG---AA 179
                       ************** * * *** *********** ****     ****** ***   * 

consensus_8037#1      GATCTGGAGGAA----------TCGTTC-GTCCGGGGCAG--TGGACCGGGT--GGACAG 554
consensus_8037#3      GATTTGGAGGAA----------TCGTTNCGTCCGGGGCAG--TGGCCCGGGT--GGACAG 480
consensus_8037#2      GATCTGGAGGAA----------TCGTTC-GTGCGGGGCAG--TGGACCGGGT--GGACAG 504
consensus_8037#4      CATCTGGAAGGCAAATACGCTCTCGCTAGNCGCGCGGCCAGCNGGACCGGGCTGGNACAG 414
consensus_8037#0      GATCTGGAGGAA----------TCGTTC-GTGCGGGGCAG--TGGACCGGGT--GGACAG 476
consensus_8037#5      GATCTGGAGGAA----------TCGTTC-GTGCGGGGCAG--TGGACCGGGT--GGACAG 224
                       ** **** *            *** *     ** ***     ** *****   * ****

consensus_8037#1      GC-AGTT---GCCAAGACCAA--CAACAAGG--TGGTGC-TGACGCACAAAGCGACCGGG 605
consensus_8037#3      GC-AGTT---GCCAAGACCAA--CAACAAGG--TGGTGC-TGACGCACAAACCGACCGGG 531
consensus_8037#2      GC-AGTT---GCCAAGACCAA--CAACAAGG--TGGTGC-TGACGCACAAACCGACCGGG 555
consensus_8037#4      GCGAGCTACGGCCAAGANCGAAGCAACACGGGCTGGTGNCTGACCCGCACACACACCCCG 474
consensus_8037#0      GC-AGTT---GCCAAGACCAA--CAACAAGG--TGGTGC-TGACGCACAAACCGACCGGG 527
consensus_8037#5      GC-AGTT---GCCAAGACCAA--CAACAAGG--TGG--G-TTACGCACAAACCGACCGGG 273
                      ** ** *   ******* * *  ***** **  ***    * ** * ** *   ***  *

consensus_8037#1      ATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAGAAATCGTCGGCGAAGCGCGCA 665
consensus_8037#3      ATCGTCGTGCAGTGCCACACAACGCNGTCGCTGTNNTGAGAATCGTCC-CGAAGCGCGCA 590
consensus_8037#2      ATCGTCGTGCAGTGCCACACAACCCGGTCGCTGGTTGAG-AATCGTCG-CGAAGCGCGCA 613
consensus_8037#4      NACCCCGNCNACTCCGCTCCCCNGCCCNCCCTGCCCCAC-CACCAAANCCGCCGCGC-CA 532
consensus_8037#0      ATCGTCGTGCAGTGCCACACAACCCGGTCGCTGTTTGAG-AATCGTCG-CGAAGCGCGCA 585
consensus_8037#5      ATCGTCGTGCAGTGCCACACAACGCGGTCGCTGTTTGAG-AATCGTCG-CGAAGCGCGCA 331
                        *  **   * * *    *    *   * ***        * *     **  **** **

consensus_8037#1      AAGATGCTGATCGGNAAGCTGGACCCAACTGTTACNATGGCGGATCAGA-TCGGTGNAGG 724
consensus_8037#3      A-GATGCTGATCGGCAAGCTGGACC--ACTTGTACAATGGCG-ATCAG--TCGGTGG--- 641
consensus_8037#2      A-GATGCTGATCGGCAAGCTGGACC--AACTGTACAATGGCG-ATCAG--TCGGGGGAAG 667
consensus_8037#4      CCGCCCCTGG-CNCCAGACCANACC--TCCGCTCCCGCCGCA-AGCGGC-GCCAAGATTG 587
consensus_8037#0      A-GATGCTGATCGGCAAGCTGGACC--AACTGTACAATGGCG-ATCAGTCGGTGGAGGCG 641
consensus_8037#5      A-GATGCTGATCGGCAAGCTGGACC--AACTGTACAATGGCG-ATCAGTCGGTGGAGGCG 387
                        *   ***  *   *  *   ***       * *    **  * * *            

consensus_8037#1      CGACAAATTCCAGGCGGAA----------------------------------------- 743
consensus_8037#3      ------------------------------------------------------------
consensus_8037#2      GCGCAACTCCAGC----------------------------------------------- 680
consensus_8037#4      CCTGATCGGCGA------------------------------------------------ 599
consensus_8037#0      CAACTCCAGCGAATCGAAGCCAAGAAGCAGACGGAAACGGCAAGACGCAAGCAAAAGCTG 701
consensus_8037#5      CAACTCCAGCGGATCGAAGCCAAGAAGCAGACGGAAACGGCGAGACGCAAGCAAAAGCTG 447
                                                                                  

consensus_8037#1      ------------------------------------------------------------
consensus_8037#3      ------------------------------------------------------------
consensus_8037#2      ------------------------------------------------------------
consensus_8037#4      ------------------------------------------------------------
consensus_8037#0      CAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGC 761
consensus_8037#5      CAGGCAAAGAAAAAGGCTTGGAAAGAGCGTGAATTTGGTGACGAGTCGGACAAGAGTAGC 507
                                                                                  

consensus_8037#1      -----------------------------------
consensus_8037#3      -----------------------------------
consensus_8037#2      -----------------------------------
consensus_8037#4      -----------------------------------
consensus_8037#0      TAAACCAAATGGCGGGTAGTCTTTAATAAACGCTT 796
consensus_8037#5      TACTCCCAATGGCGGGTAGTTTTA----------- 531
                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)