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Anopheles gambiae
cluster # 8038 cluster # 8038       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8038#0 length = 1459 sequences # 4  
consensus_8038#1 length = 714 sequences # 2  
consensus_8038#2 length = 695 sequences # 1  
consensus_8038#3 length = 586 sequences # 1  
consensus_8038#4 length = 142 sequences # 1  

consensusID : consensus_8038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1459
fasta sequence
                              [CCGCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCACGGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCATCAAATAAGTAGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAACTAAAGGTCATCTGTGAATCGGACAG-CACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGGAAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGAGTAAGTGGTGCGCCCGACAGGATAGAGACACACACATAGGATCCAGCTTATGATGTGCCCATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCATTCGTGCCGGGTTACCCTGGCAACAGAAATAGTATCGCGAGGAGATGTTGCCGTTTCTGGATGAGACTGACGAGTTGTTCAACTACTGGGTTCTAAGGCTACTGGTGCTGATCGTTATCTATTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGCCCGAATGCAGCAGTACTCGTGATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATACTGCGCAGCTCCTCACAGCAGTCTAATATATCGAATGTAACCGAAACAGAAGAGCTAGATCTCGAGAACGACAGCATAGCCTCCTCGATCGATAACATCACGCAGTCTATTCTAACGGAAGCGTCCGAGTCTGCTACTGGGCTTGATTTAAGCGACACCGAAGGATACCCGGGCGTTGTCAGTACCCCCGTTGTGGACACGTTTCACGACAACGGACCGGAGGAAATTATTCGACAGATGGACGCCACAGAAAGCGAACCTAGCGCGCAATCCCCGCAGGTCGGTCCATCGGTTGAAGCGACCGGATTAAGACAGCGGACTAACGCCACCGTCAGCAGCAATGACCCGCACGAGAAGGCAAAATCCTCCAGCCCCGTTGACAGCAGCACTGATAAGCCAAGCTCATCGGGCAGCAGTTTAGCGGAGCCACCTTTACCGACCAAACCTATTCGAATCAAGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGTACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGC]

[+] EMBL BM630688             [CCGCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCACGGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCATCAAATAAGTAGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAACTAAAGGTCATCTGTGAATCGGACAG CACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGGAAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGAGTAAGTGGTGCGCCCGACAGGATAGAGACACACACATAGGATCCAGCTTATGATGTGCCCATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCATTCGTGCCGGGTTACCCTGGCAACAGAAAAAGTATCGCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX627560             [                                                                                                                                                                GAGGAAACTAAAGGTCATCTGTGAATCGGACAGNCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGAAAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGTCCGAGTAAGTGGTGCGCCCGACAGGATAGAGACACACACATAGGATCCAGCTTATCATGTGCCCATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCATTCGTGCCGGGTTACCCTGGCAACAGAAATAGTATCGCGAGGAGATGTTGCCGTTTCTGGATGAGACTGACGAGTTGTTCAACTACTGGGTTCTAAGGCTACTGGTGCTGATCGTTATCTATTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGCCCGAATGCAGCAGTACTCGTGATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATACTGCGCAGCTCCTCACAGCAGTCTAATATATCGAATGTAACCGAAACAGAAGAGCTAGATCTCGAGAACGACAGCATAGCCTCCTCGATCGATAACATCACGCAGTCTATTCTAACGGAAGCGTCCGAGTCTGCTACTGGGCTTGATTTAAGCGACACCGAANGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX619742             [                                                                                                                                                                                                                                                                                                                                                            CATTGGCTNGGATACACCAGGAACGGATTGCTTGTTAAACGCGCGATTGCTGGACCACCATTCGTGCCGGGTTACCCTGGCAACAGAAATAGTATCGCGAGGAGATGTTGCCGTTTCTGGATGAGACTGACGAGTTGTTCAACTACTGGGTTCTAAGGCTACTGGTGCTGATCGTTATCTATTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGCCCGAATGCAGCAGTACTCGTGATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATACTGCGCAGCTCCTCACAGCAGTCTAATATATCGAATGTAACCGAAACAGAAGAGCTAGATCTCGAGAACGACAGCATAGCCTCCTCGATCGATAACATCACGCAGTCTATTCTAACGGAAGCGTNCGAGTCTGCTACTGGGCTTGATTTAAGCGACACCGAAGGATACCCGGGCGTTGTCAGTACCCCCGTTGTGGACACGTTTCACGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX604975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAACGGAAGCGTCCGAGTCTGCTACTGGGCTTGATTTAAGCGACACCGAAGGATACCCGGGCGTTGTCAGTACCCCCGTTGTGGACACGTTTCACGACAACGGACCGGAGGAAATTATTCGACAGATGGACGCCACAGAAAGCGAACCTAGCGCGCAATCCCCGCAGGTCGGTCCATCGGTTGAAGCGACCGGATTAAGACAGCGGACTAACGCCACCGTCAGCAGCAATGACCCGCACGAGAAGGCAAAATCCTCCAGCCCCGTTGACAGCAGCACTGATAAGCCAAGCTCATCGGGCAGCAGTTTAGCGGAGCCACCTTTACCGACCAAACCTATTCGAATCAAGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGTACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGC]


>consensus_8038#0 CCGCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCACGGCAGTACAG AGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCATCAAATAAGT AGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAACTAAAGGTCATCT GTGAATCGGACAGCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGGAAACCACCAACA CATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGAGTAAGTGGTGCG CCCGACAGGATAGAGACACACACATAGGATCCAGCTTATGATGTGCCCATTGGCTTGGAT ACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCATTCGTGCCGGGTT ACCCTGGCAACAGAAATAGTATCGCGAGGAGATGTTGCCGTTTCTGGATGAGACTGACGA GTTGTTCAACTACTGGGTTCTAAGGCTACTGGTGCTGATCGTTATCTATTTCGCGTGGCG ATCGACTTACGTCCGGGAAGATCGCCCGAATGCAGCAGTACTCGTGATTGAAAACAATTT AGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATACTGCGCAGCTCCTC ACAGCAGTCTAATATATCGAATGTAACCGAAACAGAAGAGCTAGATCTCGAGAACGACAG CATAGCCTCCTCGATCGATAACATCACGCAGTCTATTCTAACGGAAGCGTCCGAGTCTGC TACTGGGCTTGATTTAAGCGACACCGAAGGATACCCGGGCGTTGTCAGTACCCCCGTTGT GGACACGTTTCACGACAACGGACCGGAGGAAATTATTCGACAGATGGACGCCACAGAAAG CGAACCTAGCGCGCAATCCCCGCAGGTCGGTCCATCGGTTGAAGCGACCGGATTAAGACA GCGGACTAACGCCACCGTCAGCAGCAATGACCCGCACGAGAAGGCAAAATCCTCCAGCCC CGTTGACAGCAGCACTGATAAGCCAAGCTCATCGGGCAGCAGTTTAGCGGAGCCACCTTT ACCGACCAAACCTATTCGAATCAAGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGA AGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGC TGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCCGATAGTAAGAC GCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAA GTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGTACGATCGGGGAGAA CCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGA TGGGATAGCCGATGGACGC



consensusID : consensus_8038#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 714
fasta sequence
                              [TCGCCGAGGTTNGCAGCAGTTTAGCGGAGCCACCTTTACCGACCAAACCTATTCGAATCAAGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGG-CCACCACGGAGGGTACGATCGGGGAGAACCACAA-CACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACACGGATATGGGCAACAAATCGATCTGGCACGCGGTATGGAACGTACTTCATTTACATTGGCACGCTAGCAGTTACTGCGGTCATACTTGTACGGATGGTACTGAGGCTTTTCATTACAGGACACTTGGTTTAAATTTTGAACTCCCCACTATTTGGGGCTTGATCGGTAAACGACCACACAAGGTTCCTGATCATTGATGCCGACCCAATTATTCTCGCCGCACAGGTTAATACCACCGNNNATTTANC-GAGAGAGAG--AAANACTACCAAATTAGACTTCANAATNTACGGAAC]

[+] EMBL AL934695             [TCGCCGAGGTTNGCAGCAGTTTAGCGGAGCCACCTTTACCGACCAAACCTATTCGAATCAAGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGG CCACCACGGAGGGTACGATCGGGGAGAACCACAA CACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACACGGATATGGGCAACAAATCGATCTGGCACGCGGTATGGAACGTACTTCATTTACATTGGCACGCTAGCAGTTACTGCGGTCATACTTGTACGGATGGTACTGAGGCTTTTCATTACAGGACACTTGGTTTAAATTTTGAACTCCCCACTATTTGGGGCTTGATCGGTAAACGACCACACAAGGTTCCTGATCATTGATGCCGACCCAATTATTCTCGCCGCACAGGTTAATACCACCGNNNATTTANC GAGAGAGAG  AAANACTACCAAATTAGACTTCANAATNTACGGAAC]
[+] EMBL BM588553             [                                               CCGATTCGAATCAAGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGTACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACACGGATATGGGCAAC AATAGATCTGGCACGCGGTATGGAACGTACTTCATTTACATTGGCACGCTAGCAGTTACTGCGGTCATAC TGTACGGATGGTACTGTCGC TTTCATTAC GGACACTTG  TTCAA TTTGAACT  CCACTATT  GGGC TGATC GT AACGACCAC C ACGTTCCTGATCA TGATGCCGACC  ATTATTCTCGCCG ACAG  TAATA CACCG  AATTAAACAGAGAGAGAGAAAAAAACTACAAACTTAAACTca              ]


>consensus_8038#1 TCGCCGAGGTTNGCAGCAGTTTAGCGGAGCCACCTTTACCGACCAAACCTATTCGAATCA AGCTGAAATATCTGAATGACGATTCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCG GTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAG TATTCAACGGGCACGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTG ATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTA CCGAGCGGCCACCACGGAGGGTACGATCGGGGAGAACCACAACACGAGCACGGCCCAATC AGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAAC ACGGATATGGGCAACAAATCGATCTGGCACGCGGTATGGAACGTACTTCATTTACATTGG CACGCTAGCAGTTACTGCGGTCATACTTGTACGGATGGTACTGAGGCTTTTCATTACAGG ACACTTGGTTTAAATTTTGAACTCCCCACTATTTGGGGCTTGATCGGTAAACGACCACAC AAGGTTCCTGATCATTGATGCCGACCCAATTATTCTCGCCGCACAGGTTAATACCACCGN NNATTTANCGAGAGAGAGAAANACTACCAAATTAGACTTCANAATNTACGGAAC



consensusID : consensus_8038#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence
                              [CCGTTTTCGTCATCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCACGGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCATCAAATAAGTAGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAACTAAAGGTCATCTGTGAATCGGACAGCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGGAAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGAGATGTGCCCATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCATTCGTGCCGGGTTACCCTGGCAACAGAAAAAGTATCGCGAGGAGATGTTGCCGTTTCTGGATGAGACTGACGAGTTGTTCAACTACTGGATTCTAAGGCTACTGGTGCTGATCGTTATCTATTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGCCCGAAATGCAGCAGTACTCGTGATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATACTGCGCAGCTCCTCACAGCAGTCCAATATATCGAATGTAACCGAAACAGAAGAGCTAGATCTCGAGAACGACAGCATAGCCTCCTCGAT]

[+] EMBL BM593901             [CCGTTTTCGTCATCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCACGGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCATCAAATAAGTAGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAACTAAAGGTCATCTGTGAATCGGACAGCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGGAAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGAGATGTGCCCATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCATTCGTGCCGGGTTACCCTGGCAACAGAAAAAGTATCGCGAGGAGATGTTGCCGTTTCTGGATGAGACTGACGAGTTGTTCAACTACTGGATTCTAAGGCTACTGGTGCTGATCGTTATCTATTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGCCCGAAATGCAGCAGTACTCGTGATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATACTGCGCAGCTCCTCACAGCAGTCCAATATATCGAATGTAACCGAAACAGAAGAGCTAGATCTCGAGAACGACAGCATAGCCTCCTCGAT]


>consensus_8038#2 CCGTTTTCGTCATCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCAC GGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCA TCAAATAAGTAGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAACTA AAGGTCATCTGTGAATCGGACAGCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGGAA ACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGAGA TGTGCCCATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGA CCACCATTCGTGCCGGGTTACCCTGGCAACAGAAAAAGTATCGCGAGGAGATGTTGCCGT TTCTGGATGAGACTGACGAGTTGTTCAACTACTGGATTCTAAGGCTACTGGTGCTGATCG TTATCTATTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGCCCGAAATGCAGCAGTA CTCGTGATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACG ATCATACTGCGCAGCTCCTCACAGCAGTCCAATATATCGAATGTAACCGAAACAGAAGAG CTAGATCTCGAGAACGACAGCATAGCCTCCTCGAT



consensusID : consensus_8038#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 586
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCTGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGTACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACACGGATATGGGCAACAATCGATCCGGCACGCGGTATGGAACTTACTTCATCTACATTGGCACGCTAGCAGTTACTGCGGTCATACTGTACGGATGGTACTGTCGCTTTCATTACGGACACTTGTTCAATTTGAACTCCACTATTGGGCTGATCGTAACGACCACCACGTTCCTGATCATGATGCCGACCATTATTCTCGCCGACAGTAATACACCGAATTAAACAGAGAGAGAG]

[+] EMBL BM596224             [CCGCGGACGCGTGGGCGGACGCGTGGGAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAACCTGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGTACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACACGGATATGGGCAACAATCGATCCGGCACGCGGTATGGAACTTACTTCATCTACATTGGCACGCTAGCAGTTACTGCGGTCATACTGTACGGATGGTACTGTCGCTTTCATTACGGACACTTGTTCAATTTGAACTCCACTATTGGGCTGATCGTAACGACCACCACGTTCCTGATCATGATGCCGACCATTATTCTCGCCGACAGTAATACACCGAATTAAACAGAGAGAGAG]


>consensus_8038#3 CCGCGGACGCGTGGGCGGACGCGTGGGAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAA GCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGG GCACGTGTTGCAACCTGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGT TGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCC CACCACGGAGGGTACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGAT GGAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACACGGATAT GGGCAACAATCGATCCGGCACGCGGTATGGAACTTACTTCATCTACATTGGCACGCTAGC AGTTACTGCGGTCATACTGTACGGATGGTACTGTCGCTTTCATTACGGACACTTGTTCAA TTTGAACTCCACTATTGGGCTGATCGTAACGACCACCACGTTCCTGATCATGATGCCGAC CATTATTCTCGCCGACAGTAATACACCGAATTAAACAGAGAGAGAG



consensusID : consensus_8038#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 142
fasta sequence
                              [CAACGAGGAGCATGGGGTAATCAGGGGGATGGAACATGGCGATGGAACGGACGAGGATGGGATAGCCGAAGGACGCAGTAACACGGATATGGGCAACAATCGATCTGGCACGCGGTATGGAACGTACTCCAGAAACATGGGC]

[+] EMBL BX608347             [CAACGAGGAGCATGGGGTAATCAGGGGGATGGAACATGGCGATGGAACGGACGAGGATGGGATAGCCGAAGGACGCAGTAACACGGATATGGGCAACAATCGATCTGGCACGCGGTATGGAACGTACTCCAGAAACATGGGC]


>consensus_8038#4 CAACGAGGAGCATGGGGTAATCAGGGGGATGGAACATGGCGATGGAACGGACGAGGATGG GATAGCCGAAGGACGCAGTAACACGGATATGGGCAACAATCGATCTGGCACGCGGTATGG AACGTACTCCAGAAACATGGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8038#1      --TCGCCGAGGTTNGCAGCAGTTTAGCGGAGCCACCTTTACCGACCAAACCTATTCGAAT 58
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      ----------CCGCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCAC 50
consensus_8038#2      CCGTTTTCGTCATCACAACACATCGGGGCAAAACCTATTTTGTGAAAACTTGGTTTTCAC 60
                                                                                  

consensus_8038#1      CAAGCTGAAATATCTGAATGACGATTCGAAGCTTG-TGGAAGGAAATCTAAACGAGGGTG 117
consensus_8038#3      -----------CCGCGGACGCGTGGGCGGA-CGCG-TGGGAGGAAATCTAAACGAGGGTG 47
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      GGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCA 110
consensus_8038#2      GGCAGTACAGAGTGTTTTCGGGTCATCGGAATCTGCTTTCCATGGTTTTATGTCAGTGCA 120
                                                                                  

consensus_8038#1      TCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGAT 177
consensus_8038#3      TCGGTGAGTTTAAGCGACGCAATTTTACCCTCGAGCTGGCTGCCCATAAACTCGTTCGAT 107
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      TCAAATAAGT--AGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAAC 168
consensus_8038#2      TCAAATAAGT--AGTCGCATAGCTCGTATCTACGGTGCGTGTCCAACGTACCGAGGAAAC 178
                                                                                  

consensus_8038#1      TAGTATTCAACGGGCA--CGTGTTGCAACCCGATAGTAAGACGCTGGCCGCATGTGGTCT 235
consensus_8038#3      TAGTATTCAACGGGCA--CGTGTTGCAACCTGATAGTAAGACGCTGGCCGCATGTGGTCT 165
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      TAAAGGTCATCTGTGAATCGGACAGCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGG 228
consensus_8038#2      TAAAGGTCATCTGTGAATCGGACAGCACAGCTGCAGTGGAAAGTTGCTTTAAGCAAAAGG 238
                                                                                  

consensus_8038#1      GTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGC 295
consensus_8038#3      GTTTGATAATTGTGTTGTCCATTGCTTGATACACAACCAAAAGTCGGCCCTCAATGGTGC 225
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      AAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGA 288
consensus_8038#2      AAACCACCAACACATTGTTCCGTGTGTGCAATTTCCCAGGGAGACGGTCCTCTAGCCCGA 298
                                                                                  

consensus_8038#1      CAGTACCG--------------------------------------------AGCGGCC- 310
consensus_8038#3      CAGTACCG--------------------------------------------AGCGGCCC 241
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      GTAAGTGGTGCGCCCGACAGGATAGAGACACACACATAGGATCCAGCTTATGATGTGCCC 348
consensus_8038#2      G---------------------------------------------------ATGTGCCC 307
                                                                                  

consensus_8038#1      ACCACGGAGGGTACGATCGGGGAGAACCACA-AC-ACGAGCACGGCCCAATCAGTGGGAT 368
consensus_8038#3      ACCACGGAGGGTACGATCGGGGAGAACCACA-ACCACGAGCACGGCCCAATCAGTGGGAT 300
consensus_8038#4      -----------------------------CA-ACGAGGAGCATGGGGTAATCAGGGGGAT 30
consensus_8038#0      ATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCAT 408
consensus_8038#2      ATTGGCTTGGATACACCAGGAACGGATTGCTTGTTAAACGCACGATTGCTGGACCACCAT 367
                                                   *     *   *** *        *     **

consensus_8038#1      G-GAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACAC--GGA 425
consensus_8038#3      G-GAACATGGCGATGGAACCGACCCCGATGGGATAGCCGATGGACGCCGTAACAC--GGA 357
consensus_8038#4      G-GAACATGGCGATGGAACGGACGAGGATGGGATAGCCGAAGGACGCAGTAACAC--GGA 87
consensus_8038#0      TCGTGCCGGGTTACCCTGGCAACAGAAATAGTATCGCGAGGAGATGTTGCCGTTTCTGGA 468
consensus_8038#2      TCGTGCCGGGTTACCCTGGCAACAGAAAAAGTATCGCGAGGAGATGTTGCCGTTTCTGGA 427
                        *  *  **  *        **    *  * ** **     ** *  *        ***

consensus_8038#1      TATGGGCAACAAATCGATCTGGCACGCGGTATGGAACGTACT--TCATTTACATTGGCAC 483
consensus_8038#3      TATGGGCAACAA-TCGATCCGGCACGCGGTATGGAACTTACT--TCATCTACATTGGCAC 414
consensus_8038#4      TATGGGCAACAA-TCGATCTGGCACGCGGTATGGAACGTACT--CCAGAAACATGGGC-- 142
consensus_8038#0      TGAGACTGACGAGTTGTTCAACTACTGGGTTCTAAGGCTACTGGTGCTGATCGTTATCTA 528
consensus_8038#2      TGAGACTGACGAGTTGTTCAACTACTGGATTCTAAGGCTACTGGTGCTGATCGTTATCTA 487
                      *  *    ** * * * **    **  * *    *   ****         * *   *  

consensus_8038#1      GCTAGCA-GTTACTGCGGTCATACTTGTACGGATGGTACTGAGGCTTTTCATTACAGGAC 542
consensus_8038#3      GCTAGCA-GTTACTGCGGTCATACT-GTACGGATGGTACTGTCGCTTT-CATTAC-GGAC 470
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      TTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGC-CCGAA-TGCAGCAGTACTCGTG 586
consensus_8038#2      TTTCGCGTGGCGATCGACTTACGTCCGGGAAGATCGC-CCGAAATGCAGCAGTACTCGTG 546
                                                                                  

consensus_8038#1      ACTTGGTTTAAATTTTGAACTCCCCACTATTTGGGGCTTGATCGGTAAACGACCACACAA 602
consensus_8038#3      ACTTG-TTCAA--TTTGAACTCC--ACTATTGGG---CTGATCGT--AACGACCACC--A 518
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      ATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATA 646
consensus_8038#2      ATTGAAAACAATTTAGGACGTTTGAATAGCATTCAGCCACATAGCGTCACGACGATCATA 606
                                                                                  

consensus_8038#1      GGTTCCTGATCATTGATGCCGACCCAATTATTCTCGCCGCACAGGTTAATACCACCGNNN 662
consensus_8038#3      CGTTCCTGATCAT-GATGCCGACC--ATTATTCTCGCCG-ACAG--TAATAC-ACCGAAT 571
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      CTGCGCAGCTCCTCACAGCAGTCTAATATATCGAATGTAACCGAAACAGAAGAGCTAGAT 706
consensus_8038#2      CTGCGCAGCTCCTCACAGCAGTCCAATATATCGAATGTAACCGAAACAGAAGAGCTAGAT 666
                                                                                  

consensus_8038#1      ATTTANCGAGAGAGAGAAANACTACCAAATTAGACTTCANAATNTACGGAAC-------- 714
consensus_8038#3      -TAAACAGAGAGAGAG-------------------------------------------- 586
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      CTCGAGAACGACAGCATAGCCTCCTCGATCGATAACATCACGCAGTCTATTCTAACGGAA 766
consensus_8038#2      CTCGAGAACGACAGCATAGCCTCCTCGAT------------------------------- 695
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      GCGTCCGAGTCTGCTACTGGGCTTGATTTAAGCGACACCGAAGGATACCCGGGCGTTGTC 826
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      AGTACCCCCGTTGTGGACACGTTTCACGACAACGGACCGGAGGAAATTATTCGACAGATG 886
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      GACGCCACAGAAAGCGAACCTAGCGCGCAATCCCCGCAGGTCGGTCCATCGGTTGAAGCG 946
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      ACCGGATTAAGACAGCGGACTAACGCCACCGTCAGCAGCAATGACCCGCACGAGAAGGCA 1006
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      AAATCCTCCAGCCCCGTTGACAGCAGCACTGATAAGCCAAGCTCATCGGGCAGCAGTTTA 1066
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      GCGGAGCCACCTTTACCGACCAAACCTATTCGAATCAAGCTGAAATATCTGAATGACGAT 1126
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      TCGAAGCTTGTGGAAGGAAATCTAAACGAGGGTGTCGGTGAGTTTAAGCGACGCAATTTT 1186
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      ACCCTCGAGCTGGCTGCCCATAAACTCGTTCGATTAGTATTCAACGGGCACGTGTTGCAA 1246
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      CCCGATAGTAAGACGCTGGCCGCATGTGGTCTGTTTGATAATTGTGTTGTCCATTGCTTG 1306
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      ATACACAACCAAAAGTCGGCCCTCAATGGTGCCAGTACCGAGCGGCCCACCACGGAGGGT 1366
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ------------------------------------------------------------
consensus_8038#3      ------------------------------------------------------------
consensus_8038#4      ------------------------------------------------------------
consensus_8038#0      ACGATCGGGGAGAACCACAACCACGAGCACGGCCCAATCAGTGGGATGGAACATGGCGAT 1426
consensus_8038#2      ------------------------------------------------------------
                                                                                  

consensus_8038#1      ---------------------------------
consensus_8038#3      ---------------------------------
consensus_8038#4      ---------------------------------
consensus_8038#0      GGAACCGACCCCGATGGGATAGCCGATGGACGC 1459
consensus_8038#2      ---------------------------------
                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)