cluster # 8049

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Anopheles gambiae
cluster # 8049 cluster # 8049 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8049#0 length = 1639 sequences # 5

consensus_8049#1 length = 1297 sequences # 4

consensusID : consensus_8049#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1639
fasta sequence

                              [CCGGCGAAATGCGGGAGCCACAAGGCGAAGCTAGTGGGCTCAGCATAACGACCGTGTTTTGTTACTGAAGAGCCACCATCCATCACCGTCCTACGCCCCACCCGGATCAGCTACGAAAATCCCCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTGTTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTTGGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGCGAAAGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAGGCGCCCTTCCACCGAGAGGATGGTGATATCGGCGGAACACGAGCGCAACGGCATTGCCGACTTCTTCACGCAAGTCGATCCGGAGGTGCGCAAGGTGACGCTTGCGATCGGGAACATCATCTCGAAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGTCGCGATGCGGG-AACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAACA-TTAGCGTACCG-CCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATAACTATAACGCCCTGGCGGCCTCCTCGAATGGAGTGTTTTTCAGCGAAAACACGAACGGCCCCGGGGACGATTCGGACACGGAACCGCCCGGGCTCGAGCAGTACCCGGTGAATCTGCTCGCGCTCGACTACACCGTCTGGTTCTTTCTCAAGTGGAATCGCAACTCGCTGGACGAGAGCGCATTCTGGCACGATGCCAACTGTACCGTGATGCTGGAGATCAGCGAAACCCAGCAGGGCACGGAGCAGGTGTGCGGTCCGCAGGA-ATCATCAACCTGATACTGAGCCTCAAGTTCCAGT-ACAGCTTTCAGCTGGTGCCGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCT-GGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAACGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAACAATAAATGTATTTTGGAT]

[+] EMBL BM583347             [CCGGCGAAATGCGGGAGCCACAAGGCGAAGCTAGTGGGCTCAGCATAACGACCGTGTTTTGTTACTGAAGAGCCACCATCCATCACCGTCCTACGCCCCACCCGGATCAGCTACGAAAATCCCCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTGTTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTTGGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGCGAAAGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAGGCGCCCTTCCACCGAGAGGATGGTGATATCGGCGGAACACGAGCGCAACGGCATTGCCGACTTCTTCACGCAAGTCGATCCGGAGGTGCGCAAGGTGACGCTTGCGATCGGGAACATCATCTCGAAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGTCGCGATGCGGGAAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAACATTTAGCGTACCGCCCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09MSC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTTAAACGTAATGATGGAACATTGTCGCGATGCGGG AACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAACA TTAGCGTACCG CCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATAACTATAACGCCCTGGCGGCCTCCTCGAATGGAGTGTTTTTCAGCGAAAACACGAACGGCCCCGGGGACGATTCGGACACGGAACCGCCCGGGCTCGAGCAGTACCCGGTGAATCTGCTCGCGCTCGACTACACCGTCTGGTTCTTTCTCAAGTGGAATCGCAACTCGCTGGACGAGAGCGCATTCTGGCACGATGCCAACTGTACCGTGATGCTGGAGATCAGCGAAACCCAGCAGGGCACGGAGCAGGTGTGCGGTCCGCAGGA ATCATCAACCTGATACTGAGCCTCAAGTTCCAGT ACAGCTTTCAGCTGGTGCCGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCT GGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAACGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATAC                                                                                                          ]
[+] EMBL CNS093SH             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTTAAACGTAATGATGGAACATTGTCGCGATGCGGG AACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAACA TTAGCGTACCG CCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTCCCAGTGGCACCACGCTGCAAAACCACATCGATAACTATAACGCCCTGGCGGCCTCCTCGAATGGAGTGTTTTTCAGCGAAAACACGAACGGCCCCGGGGACGATTCGGACACGGAACCGCCCGGGCTCGAGCAGTACCCGGTGAATCTGCTCGCGCTCGACTACACCGTCTGGTTCTTTCTCAAGTGGAATCGCAACTCGCTGGACGAGAGCGCATTCTGGCACGATGCCAACTGTACCGTGATGCTGGAGATCAGCGAAACCCAGCAGGGCACGGAGCAGGTGTGCGGTCCGCAGGC ATCATCAACCTGATACTGAGCCTCAAGTTCCAGT ACAGCTTTCAGCTGGTGCCGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTAGGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCT                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09MSD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATAACTATAACGCCCTGGCGGCCTCCTCGAATGGAGTGTTTTTCAGCGAAAACACGAACGGCCCCGGGGACGATTCGGACACGGAACCGCCCGGGCTCGAGCAGTACCCGGTGAATCTGCTCGCGCTCGACTACACCGTCTGGTTCTTTCTCAAGTGGAATCGCGACTCGCTGGACGAGAGCGCATTCTGGCACGATGCCAACTGTACCGTGATGCTGGAGATCAGCGAAACCCAGCAGGGCACGGAGCAGGTGTGCGGTCCGCAGGACATCATCAACCTGATACTGAGCCTCAAGTTCCAGTAACAGCTTTCAGCTGGTGCCGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCT GGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAACGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAACAATAAATGTATTTTGGAT]
[-] EMBL CNS093SI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCT GGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAATGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAACAATAAATGTATTTT    ]




>consensus_8049#0
CCGGCGAAATGCGGGAGCCACAAGGCGAAGCTAGTGGGCTCAGCATAACGACCGTGTTTT
GTTACTGAAGAGCCACCATCCATCACCGTCCTACGCCCCACCCGGATCAGCTACGAAAAT
CCCCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTG
TTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTT
GGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGCGAA
AGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAGGCGC
CCTTCCACCGAGAGGATGGTGATATCGGCGGAACACGAGCGCAACGGCATTGCCGACTTC
TTCACGCAAGTCGATCCGGAGGTGCGCAAGGTGACGCTTGCGATCGGGAACATCATCTCG
AAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGT
CGCGATGCGGGAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATAC
CTGCAAAGCTACAACATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCAC
TGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCG
TCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCC
GACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATAACTATAACGCCCTG
GCGGCCTCCTCGAATGGAGTGTTTTTCAGCGAAAACACGAACGGCCCCGGGGACGATTCG
GACACGGAACCGCCCGGGCTCGAGCAGTACCCGGTGAATCTGCTCGCGCTCGACTACACC
GTCTGGTTCTTTCTCAAGTGGAATCGCAACTCGCTGGACGAGAGCGCATTCTGGCACGAT
GCCAACTGTACCGTGATGCTGGAGATCAGCGAAACCCAGCAGGGCACGGAGCAGGTGTGC
GGTCCGCAGGAATCATCAACCTGATACTGAGCCTCAAGTTCCAGTACAGCTTTCAGCTGG
TGCCGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTGGCCC
TGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGG
GCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGA
TACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAA
ACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGT
GTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAACGTGGCTTTCCGGT
TTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTC
CAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAA
CAATAAATGTATTTTGGAT

consensusID : consensus_8049#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1297
fasta sequence

                              [GCGGGAGCACAAGGCGAATAGT--GGGCTCAGCATAACGACCGTGTTTTGTTGCTGAAGAGCCCCCATCCATCACCGTCCTACGCCACACCCG-GATCAGCTACGAAAATCCTCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTGTTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTTGGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGAGAAAGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAAGTGCCCTTCCACCGAGAGGATGGTGATATCGACGGAACACGAGCGCAACGGCATT-CCGCCTTCTTCACGCAAGTAGATCCGGAGGTGCGCAGGGTGACGCTTGCGATCGGGAACATCATCTCGAAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGTCGCGATGCGGGAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAAC-ATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTGGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAATGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAACAATAAATGTATTTTGGATAAAAACC]

[+] EMBL CNS08JNQ             [GCGGGAGCACAAGGCGAATAGT  GGGCTCAGCATAACGACCGTGTTTTGTTGCTGAAGAGCCCCCATCCATCACCGTCCTACGCCACACCCG GATCAGCTACGAAAATCCTCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTGTTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTTGGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGAGAAAGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAAGTGCCCTTCCACCGAGAGGATGGTGATATCGACGGAACACGAGCGCAACGGCATT CCGCCTTCTTCACGCAAGTAGATCCGGAGGTGCGCAGGGTGACGCTTGCGATCGGGAACATCATCTCGAAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGTCGCGATGCGGGAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAAC ATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATGGCTGCCAGGGGCGGATAATGGAGTAGGGCGTGCTGGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGG                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS08FMG             [        ACAAGGCGACTAGTTGGGGCTCAGCATAACGACCGTGTTTTGTTGCTGAAGAGCCCCCATCCATCACCGTCCTACGCCACACCCGTGATCAGCTACGAAAATCCTCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTGTTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTTGGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGAGAAAGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAAGTGCCCTTCCACCGAGAGGATGGTGATATCGGCGGAACACGAGCGCAACGGCATTGCCGACTTCTTCACGCAAGTCGATCCGGAGGTGCGCAAGGTGACGCTTGCGATCGGGAACATCATCTCGAAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGTCGCGATGCGGGAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAAC ATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTGGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTTTTTGGGCGAGTTCGAAACGCTGAT                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08FMH             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAACAATTAG GTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTGGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAATGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAACAATAAATGTATTTTGGATAAAAACC]
[-] EMBL CNS08JNR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGTTTGGGCGAGTTCGAATTTTTGATCGGGCTTAGGCGCGACCCGATGGAGAACAACAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAAACAGTAAAATGCTCAACCACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAATGTGGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAACAATAAATGTATTTTGGATAta    ]




>consensus_8049#1
GCGGGAGCACAAGGCGAATAGTGGGCTCAGCATAACGACCGTGTTTTGTTGCTGAAGAGC
CCCCATCCATCACCGTCCTACGCCACACCCGGATCAGCTACGAAAATCCTCCTCAAAACT
AGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTGTTTGTCGTTTTGT
TCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTTGGAGATACCGAAA
GTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGAGAAAGTGCGAACCGCC
GAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAAGTGCCCTTCCACCGAGA
GGATGGTGATATCGACGGAACACGAGCGCAACGGCATTCCGCCTTCTTCACGCAAGTAGA
TCCGGAGGTGCGCAGGGTGACGCTTGCGATCGGGAACATCATCTCGAAGAACTCCATCAA
AGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGTCGCGATGCGGGAAC
GCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATACCTGCAAAGCTACAA
CATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCACTGTTTGCAGCTGTG
GAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCGTCCAGCGACATGCC
CGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCCGACTCGAGCTGTTC
CAGTGGCACCACGCTGCAAAACCACATCGATGGCTGCCAGGGGCGGATAATGGAGTCGGG
CGTGCTGGCCCTGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTT
CGTGTGTTTGGGCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAA
CAACTGGAAGATACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCC
CGCGCTGGCAAACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACAT
TGTGTAGAGGTGTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAATGT
GGCTTTCCGGTTTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTC
TTCAATGTGTCCAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGT
CAAAATTTTAACAATAAATGTATTTTGGATAAAAACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8049#0      CCGGCGAAATGCGGGAGCCACAAGGCGAAGCTAGTGGGCTCAGCATAACGACCGTGTTTT 60
consensus_8049#1      ----------GCGGGAGC-ACAAGGCGAA--TAGTGGGCTCAGCATAACGACCGTGTTTT 47
                                ******** **********  *****************************

consensus_8049#0      GTTACTGAAGAGCCACCATCCATCACCGTCCTACGCCCCACCCGGATCAGCTACGAAAAT 120
consensus_8049#1      GTTGCTGAAGAGCCCCCATCCATCACCGTCCTACGCCACACCCGGATCAGCTACGAAAAT 107
                      *** ********** ********************** **********************

consensus_8049#0      CCCCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTG 180
consensus_8049#1      CCTCCTCAAAACTAGTTTTACAAACGCTTCCGCGTTGGGCAGGGACTCCTGTGATTGTTG 167
                      ** *********************************************************

consensus_8049#0      TTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTT 240
consensus_8049#1      TTTGTCGTTTTGTTCTGCGCGCTACAGCAAGCCTGTGTACCTGCGTAAAGCCGGGTGGTT 227
                      ************************************************************

consensus_8049#0      GGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGCGAA 300
consensus_8049#1      GGAGATACCGAAAGTGGGAGAGTGAGAGAGACAGAGAGAGATTGAACAAACGGGTGAGAA 287
                      ******************************************************** ***

consensus_8049#0      AGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAGGCGC 360
consensus_8049#1      AGTGCGAACCGCCGAACCGGAGGAACCGGAAGTCGAACCCGTTTGAAACCGTCGAAGTGC 347
                      ******************************************************* * **

consensus_8049#0      CCTTCCACCGAGAGGATGGTGATATCGGCGGAACACGAGCGCAACGGCATTGCCGACTTC 420
consensus_8049#1      CCTTCCACCGAGAGGATGGTGATATCGACGGAACACGAGCGCAACGGCATT-CCGCCTTC 406
                      *************************** *********************** *** ****

consensus_8049#0      TTCACGCAAGTCGATCCGGAGGTGCGCAAGGTGACGCTTGCGATCGGGAACATCATCTCG 480
consensus_8049#1      TTCACGCAAGTAGATCCGGAGGTGCGCAGGGTGACGCTTGCGATCGGGAACATCATCTCG 466
                      *********** **************** *******************************

consensus_8049#0      AAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGT 540
consensus_8049#1      AAGAACTCCATCAAAGAGATCACGTTGGAAAAATCGTTAAACGTAATGATGGAACATTGT 526
                      ************************************************************

consensus_8049#0      CGCGATGCGGGAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATAC 600
consensus_8049#1      CGCGATGCGGGAACGCTGCTGGCAAAGAATATCGTCAAGTCGGAGTACCTCCTCAAATAC 586
                      ************************************************************

consensus_8049#0      CTGCAAAGCTACAACATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCAC 660
consensus_8049#1      CTGCAAAGCTACAACATTAGCGTACCGCCGGACAGCTCGAAAGCCATACTGATCGAGCAC 646
                      ************************************************************

consensus_8049#0      TGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCG 720
consensus_8049#1      TGTTTGCAGCTGTGGAGAAGGAAGTACGGCGGTTCCACCGACGCAGGGTACGTTCCATCG 706
                      ************************************************************

consensus_8049#0      TCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCC 780
consensus_8049#1      TCCAGCGACATGCCCGGTCCGTCATCCTCCACACCGTACGCATTTCCATCCACCTCTGCC 766
                      ************************************************************

consensus_8049#0      GACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGATAACTATAACGCCCTG 840
consensus_8049#1      GACTCGAGCTGTTCCAGTGGCACCACGCTGCAAAACCACATCGAT--------------- 811
                      *********************************************               

consensus_8049#0      GCGGCCTCCTCGAATGGAGTGTTTTTCAGCGAAAACACGAACGGCCCCGGGGACGATTCG 900
consensus_8049#1      ------------------------------------------------------------
                                                                                  

consensus_8049#0      GACACGGAACCGCCCGGGCTCGAGCAGTACCCGGTGAATCTGCTCGCGCTCGACTACACC 960
consensus_8049#1      ------------------------------------------------------------
                                                                                  

consensus_8049#0      GTCTGGTTCTTTCTCAAGTGGAATCGCAACTCGCTGGACGAGAGCGCATTCTGGCACGAT 1020
consensus_8049#1      ------------------------------------------------------------
                                                                                  

consensus_8049#0      GCCAACTGTACCGTGATGCTGGAGATCAGCGAAACCCAGCAGGGCACGGAGCAGGTGTGC 1080
consensus_8049#1      ------------------------------------------------------------
                                                                                  

consensus_8049#0      GGTCCGCAGGAATCATCAACCTGATACTGAGCCTCAAGTTCCAGTACAGCTTTCAGCTGG 1140
consensus_8049#1      ------------------------------------------------------------
                                                                                  

consensus_8049#0      TGCCGAACATCATGTTCGATGGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTGGCCC 1200
consensus_8049#1      --------------------GGCTGCCAGGGGCGGATAATGGAGTCGGGCGTGCTGGCCC 851
                                          ****************************************

consensus_8049#0      TGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGG 1260
consensus_8049#1      TGTCGTGCGGCGTCGTGTACAACAACCAGCCGGGGCCGGAGGGTCGGTTCGTGTGTTTGG 911
                      ************************************************************

consensus_8049#0      GCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGA 1320
consensus_8049#1      GCGAGTTCGAAACGCTGATCGGGCTGAGGCGCGACCCGATGGAGAACAACAACTGGAAGA 971
                      ************************************************************

consensus_8049#0      TACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAA 1380
consensus_8049#1      TACGGATGCTGAAGCTGTACATACGGTACAAAAAGGTGGACAATCTGCCCGCGCTGGCAA 1031
                      ************************************************************

consensus_8049#0      ACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGT 1440
consensus_8049#1      ACAGTAAAATGCTCAACAACTGTCTTATGATACCGCTCACGATGGACATTGTGTAGAGGT 1091
                      ************************************************************

consensus_8049#0      GTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAACGTGGCTTTCCGGT 1500
consensus_8049#1      GTGCGTGGAGGAGTGAATGCTCCTCACGCCTCAAAGGTGTGCAAAATGTGGCTTTCCGGT 1151
                      ********************************************** *************

consensus_8049#0      TTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTC 1560
consensus_8049#1      TTAGTGTCGGAAAAGTGGGATTTCTAGCCATACCGTACGAAGGATGTTCTTCAATGTGTC 1211
                      ************************************************************

consensus_8049#0      CAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAA 1620
consensus_8049#1      CAACAGCGACAGGTGCCTTACATTAGTTAAGAACGTTGTAGATATAGGTCAAAATTTTAA 1271
                      ************************************************************

consensus_8049#0      CAATAAATGTATTTTGGAT------- 1639
consensus_8049#1      CAATAAATGTATTTTGGATAAAAACC 1297
                      *******************