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Anopheles gambiae
cluster # 8054 cluster # 8054       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8054#0 length = 1523 sequences # 6  
consensus_8054#1 length = 811 sequences # 1  
consensus_8054#2 length = 651 sequences # 2  

consensusID : consensus_8054#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1523
fasta sequence
                              [CCGCTCTTATGAGACAGAAGTGGTGAAGAAGGTGGTTAATTTTCTGGAAGAAAAGATCGACGAATGCTCAAGAGAAGATTGTAAGCTTAAATTCATACGCGGACTGCAAAACCTCAAGTGCCCTAGAACAGCGGATAGATTGATAAAACTTGCTCAAGAATCCACCAAAGCCGTCAGTGTAGCAGCAATGAAAGCTCTGCGCTCGTTTTCTGTCTATTTATGGAACGATGAGTTCAGGGCCAAATTCGAAGATATTTTCTTCCAGGTGTCGAAACGTTATGATTCTAGTGCACGAACTCTGGCGCTGGATATATTATTGGATCTGAAGCCGGATCAAGATGAGCTATCGCATCTAGTACAATTTTTGAAATCAAAGGACAAAGCGTACGAATTGAAGCAGTATTTGCTGCAGAAACTGCGGATGGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATG--AGT-GGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGGCCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCACTCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATCTTTTGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGCCCCGCAGCTGCATTTGTCTTCTGCTCTAGACTTCTCCGGTGATCCTGCTTTGTGCATGCAACTAGTTCAGCCCAAGAGTACACTCAAACATCGATTTGTCGGCACAATAGATTTAATAGGAACAAAGCACCAAGCATCACGCAAAACTACGAAAACATTTAAGCTGAATGGATTAACGCATTCACTGAATAGGAAAAATAACGATATGTGTAATTTGATTTCAAAAAGCTGATACCGAGTCTCAAGTAAGCCATGACACGCGGATAGATTGCAAAAATAATTAACGAGGAAGTTAAGAAAATTAGGAAATTGTTCAAGCCGGGTAAAGTTAAATATGCAACTATCATAATGGACCATTCCTATGAAATCTCTTTTACATCACTTCACTTACTGAATCTGACATT]

[+] EMBL BM589690             [CCGCTCTTATGAGACAGAAGTGGTGAAGAAGGTGGTTAATTTTCTGGAAGAAAAGATCGACGAATGCTCAAGAGAAGATTGTAAGCTTAAATTCATACGCGGACTGCAAAACCTCAAGTGCCCTAGAACAGCGGATAGATTGATAAAACTTGCTCAAGAATCCACCAAAGCCGTCAGTGTAGCAGCAATGAAAGCTCTGCGCTCGTTTTCTGTCTATTTATGGAACGATGAGTTCAGGGCCAAATTCGAAGATATTTTCTTCCAGGTGTCGAAACGTTATGATTCTAGTGCACGAACTCTGGCGCTGGATATATTATTGGATCTGAAGCCGGATCAAGATGAGCTATCGCATCTAGTACAATTTTTGAAATCAAAGGACAAAGCGTACGAATTGAAGCAGTATTTGCTGCAGAAACTGCGGATGGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGGAATTGGGAGGTGTGTTGAAACGTGGCATCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM579858             [                                                                                 ccgGCTTAAATTCATACGCGGACTGCAAAACCTCAAATGCCCTAGAACAGCGGATAGATTGATAAAACTTGCTCAAGAATCCACCAAAGCCGTCAGTGTAGCAGCAATGAAAGCTCTGCGCTCGTTTTCTGTCTATTTATGGAACGATGAGTTCAGGGTCAAATTCGAAGATATTTTCTTCCAGGTGTCGAAACGTTATGATTCTAGTGCACGAACTCTGGCGCTGGATATATTATTGGATCTGAAGCCGGATCAAGATGAGCTATCGCATCTAGTACAATTTTTGAAATCAAAGGACAAAGCGTACGAAGTGAAGCAGTATTTGCTGCAGAAATTGCAGATGGCTGCCGCACAATGCTCAGAATTTGGTTCAATGCTGAAGAATATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGTAAGAGATG  AGT GGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTATACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACTACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX604781             [                                                                                                                                                                                                                                                                                                                                                                                                                   TTGCTGCAGAAACTGCGGATGGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATG  AGT GGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGGCCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCACTCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATCTTTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM599593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGGCCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCACTCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATCTTTTGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGCCCCGCAGCTGCATTTGTCTTCTGCTCTAGACTTCTCCGGTGATCCTGCTTTGTGCATGCAACTAGTTCAGCCCAAGAGTACACTCAAACATCGATTTGTCGGCACAATAGATTTAATAGGAACAAAGCACCAAGCATCACGCAAAACTACGAAAACATTTAAGCTGAATGGATTAACGCATTCACTGAATAGG AAAATAACGATATGTGTA                                                                                                                                                                                                ]
[+] EMBL BX623999             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCAATCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATTTTTTGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGCCCCACAGCTGCATTTGTCTTCTGCTCTAGACTTCTCCGGTGATCCTGCTTTGTGCATGCAACTAGTTCAGCCCAAGAGTACACTCAAACATCGATTTGTCGGCACAATAGATTTAATAGGAACAAAGCACCAAGCATCACGCAAAACTACGAAAACATTTAATCTGAATGGATTAACGCATTCACTGAATAGGAAAAATAACGATATGTGTAATTTGATTTCAAAAAGCTGATACCGAGTCTCAAGTAAGCCATGACACGCGGATAGATTGCAAAAATAATTAACGAGGAAGTTAAGAAAATTAGGAAATTGTTCAAGCCGGGTAAAGTTAAATATGCAACTATCATAATGGACCATTCCTATGAAATCTCTTTTACATCACTTCACTTACTGAATCTGACATT]
[+] EMBL BM598547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCACTCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATCTTTTGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGCCCCGCAGCTGCATTTGTCTTCTGCTCTAGACTTCTCCGGTGATCCTGCTTTGTGCATGCAACTAGTTCAGCCCAAGAGTACACTCAAACATCGATTTGTCGGCACAATAGATTTAATAGGAACAAAGCACCAAGCATCACGCAAAACTACGAAAACATTTAAGCTGAATGGATTAACGCATTCACTGAATAGGAAAAATAACGATATGTGTAATTTGATTTCAAAAAGCTAATACCGAGTCTCAAGTAAGCCATGACACGCGGATAGATTGCAAAAATAATTAACGAGGAAGTTAAGAAAATTAGGAAATTGTTCAAGCCGGGTAAAGTTAAATATGCAACTATCATAATGGACCATTCCTATGAAATC                                   ]


>consensus_8054#0 CCGCTCTTATGAGACAGAAGTGGTGAAGAAGGTGGTTAATTTTCTGGAAGAAAAGATCGA CGAATGCTCAAGAGAAGATTGTAAGCTTAAATTCATACGCGGACTGCAAAACCTCAAGTG CCCTAGAACAGCGGATAGATTGATAAAACTTGCTCAAGAATCCACCAAAGCCGTCAGTGT AGCAGCAATGAAAGCTCTGCGCTCGTTTTCTGTCTATTTATGGAACGATGAGTTCAGGGC CAAATTCGAAGATATTTTCTTCCAGGTGTCGAAACGTTATGATTCTAGTGCACGAACTCT GGCGCTGGATATATTATTGGATCTGAAGCCGGATCAAGATGAGCTATCGCATCTAGTACA ATTTTTGAAATCAAAGGACAAAGCGTACGAATTGAAGCAGTATTTGCTGCAGAAACTGCG GATGGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGA TGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCG CAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGG AGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAG CTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGA GGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGT GCAGGGCGTGGTAATGAGGCCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACA TGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCA AGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGG AGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCA CTCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATC TTTTGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGCCCCGCAGCTGCATTTGTCTTC TGCTCTAGACTTCTCCGGTGATCCTGCTTTGTGCATGCAACTAGTTCAGCCCAAGAGTAC ACTCAAACATCGATTTGTCGGCACAATAGATTTAATAGGAACAAAGCACCAAGCATCACG CAAAACTACGAAAACATTTAAGCTGAATGGATTAACGCATTCACTGAATAGGAAAAATAA CGATATGTGTAATTTGATTTCAAAAAGCTGATACCGAGTCTCAAGTAAGCCATGACACGC GGATAGATTGCAAAAATAATTAACGAGGAAGTTAAGAAAATTAGGAAATTGTTCAAGCCG GGTAAAGTTAAATATGCAACTATCATAATGGACCATTCCTATGAAATCTCTTTTACATCA CTTCACTTACTGAATCTGACATT



consensusID : consensus_8054#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 811
fasta sequence
                              [ATCGCCCCGAGGTTAGATGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCCACAATTGGTGTAACAGCTGGGCGCTCAGTTTCTACCGGAGGCAATATCGTTGATCTTAAAACGGGCCAGGTGGAACTAATTGAAAGCCTTATTGGGGGGTCCCAAAAACGCGCCACATCCCAAANGGTAGAAACACAGAAATACTGGGGCAATCAAGCATTGAACTAGCCAAGGGTGATCTTTTGGANTAACACATTCTTTTGCACTCAGTGANGTTCGCGGGTTCAACTCCCGGCAGGCCCCCANATGAATTGGCACTCCGGACNAAACTCTCACGGGACACCGCTTGG]

[+] EMBL AL932899             [ATCGCCCCGAGGTTAGATGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCCACAATTGGTGTAACAGCTGGGCGCTCAGTTTCTACCGGAGGCAATATCGTTGATCTTAAAACGGGCCAGGTGGAACTAATTGAAAGCCTTATTGGGGGGTCCCAAAAACGCGCCACATCCCAAANGGTAGAAACACAGAAATACTGGGGCAATCAAGCATTGAACTAGCCAAGGGTGATCTTTTGGANTAACACATTCTTTTGCACTCAGTGANGTTCGCGGGTTCAACTCCCGGCAGGCCCCCANATGAATTGGCACTCCGGACNAAACTCTCACGGGACACCGCTTGG]


>consensus_8054#1 ATCGCCCCGAGGTTAGATGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAAT ATTATCGAAAAAGATGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCC ACGGCATTAAGTCGCAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTG CAAGAGATGAGTGGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGC GACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTT AGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGT ATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGA GAATTGATGGGACATGTTTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCC ATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCCACAATTGGTGTAACAGCTG GGCGCTCAGTTTCTACCGGAGGCAATATCGTTGATCTTAAAACGGGCCAGGTGGAACTAA TTGAAAGCCTTATTGGGGGGTCCCAAAAACGCGCCACATCCCAAANGGTAGAAACACAGA AATACTGGGGCAATCAAGCATTGAACTAGCCAAGGGTGATCTTTTGGANTAACACATTCT TTTGCACTCAGTGANGTTCGCGGGTTCAACTCCCGGCAGGCCCCCANATGAATTGGCACT CCGGACNAAACTCTCACGGGACACCGCTTGG



consensusID : consensus_8054#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 651
fasta sequence
                              [AGATCGGCCGAGGATGGACTATCCACGGCATTAAGTCNCAAATTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTGTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCAATCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATACTTTNAGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGNCCCACAGCTGCATTTGTCTTCTGGTCTAGACT]

[+] EMBL BX466336             [AGATCGGCCGAGGATGGACTATCCACGGCATTAAGTCNCAAATTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGGAGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTGTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCAATCCAAGGTAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATCTTTTGATACATACTTTNAGCATCAGTTGATGTTCGGTTCAGCTCCGTGCAGGNCCCACAGCTGCATTTGTCTTCTGGTCTAGACT]
[+] EMBL BX628911             [                                                                                                                                                                                                                                                           ACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTT TGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCTTCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAACGGTCAGGTGACTACGAGCTTATGGGGTCGAAACGCGCAATCCAAGGNAGAACAGAATACTGGAATCAGCATGACTAGCAGGTTATC                                                                                     ]


>consensus_8054#2 AGATCGGCCGAGGATGGACTATCCACGGCATTAAGTCNCAAATTTCGACCGCTCCGTCAT TTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGGAGGTGTGTTGAAACGTGGCATCG TTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAGCTTGTTCACGCTAGGGTTGTACG CAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGAGGAACAGATAACAGACAATAACG AAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGTGCAGGGCGTGGTAATGAGACCGT TGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACATGTTGTGGAGCGGTACAGCATCG GAGCCTACACCAGCCTACCAGGCCATCACACTGTTGCAAGACAACGAAGAACGGTTTGCT TCGCACAATGGTGTAACGCTGGCGCTCAGTTCTACCGGAGCAATATCGATTGATCTAAAC GGTCAGGTGACTATGAGCTTATGGGGTCGAAACGCGCAATCCAAGGTAGAACAGAATACT GGAATCAGCATGACTAGCAGGTTATCTTTTGATACATACTTTNAGCATCAGTTGATGTTC GGTTCAGCTCCGTGCAGGNCCCACAGCTGCATTTGTCTTCTGGTCTAGACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8054#0      CCGCTCTTATGAGACAGAAGTGGTGAAGAAGGTGGTTAATTTTCTGGAAGAAAAGATCGA 60
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      CGAATGCTCAAGAGAAGATTGTAAGCTTAAATTCATACGCGGACTGCAAAACCTCAAGTG 120
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      CCCTAGAACAGCGGATAGATTGATAAAACTTGCTCAAGAATCCACCAAAGCCGTCAGTGT 180
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      AGCAGCAATGAAAGCTCTGCGCTCGTTTTCTGTCTATTTATGGAACGATGAGTTCAGGGC 240
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      CAAATTCGAAGATATTTTCTTCCAGGTGTCGAAACGTTATGATTCTAGTGCACGAACTCT 300
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      GGCGCTGGATATATTATTGGATCTGAAGCCGGATCAAGATGAGCTATCGCATCTAGTACA 360
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      ATTTTTGAAATCAAAGGACAAAGCGTACGAATTGAAGCAGTATTTGCTGCAGAAACTGCG 420
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ---------------------------------------------ATCGCCCCGAGGTTA 15
                                                                                  

consensus_8054#0      GATGGCTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGA 480
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      GATG-CTGCCGCACAATGCTCAGAATTTGGTGCAATGCTGAAGAATATTATCGAAAAAGA 74
                                                                                  

consensus_8054#0      TGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCG 540
consensus_8054#2      ----------------------AGATCGGCCGAGGATGGACTATCCACGGCATTAAGTCN 38
consensus_8054#1      TGGCCTTCTAAACAACTACAACATACTCGCTCCCAAGGGACTATCCACGGCATTAAGTCG 134
                                            * *   **     * ********************** 

consensus_8054#0      CAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGG 600
consensus_8054#2      CAAATTT-CGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGG 97
consensus_8054#1      CAAATTTTCGACCGCTCCGTCATTTAATGCCTCGCTTACCAGCTTGCAAGAGATGAGTGG 194
                      ******* ****************************************************

consensus_8054#0      AGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAG 660
consensus_8054#2      AGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAG 157
consensus_8054#1      AGGTGTGTTGAAACGTGGCATCGTTGATTTGACCCTGGATGTAAGCGACGAAAAGATGAG 254
                      ************************************************************

consensus_8054#0      CTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGA 720
consensus_8054#2      CTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGA 217
consensus_8054#1      CTTGTTCACGCTAGGGTTGTACGCAGGAGGAATGTCGTCGTTTGTTAGTAGCAATGACGA 314
                      ************************************************************

consensus_8054#0      GGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGT 780
consensus_8054#2      GGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGT 277
consensus_8054#1      GGAACAGATAACAGACAATAACGAAGAGGAAGATACAACAGCTGGTATGGAGCTGTCGGT 374
                      ************************************************************

consensus_8054#0      GCAGGGCGTGGTAATGAGGCCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACA 840
consensus_8054#2      GCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACA 337
consensus_8054#1      GCAGGGCGTGGTAATGAGACCGTTGGAATTTTTCAACGGTAAGGGAGAATTGATGGGACA 434
                      ****************** *****************************************

consensus_8054#0      TGTT-TGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGC 899
consensus_8054#2      TGTTGTGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGC 397
consensus_8054#1      TGTT-TGGAGCGGTACAGCATCGGAGCCTACACCAGCCTACCAGGCCATCACACTGTTGC 493
                      **** *******************************************************

consensus_8054#0      AAGACAACGAAGAACGGTTTGCTTCGC-ACAAT-GGTGTAAC-GCTGG-CGCTCAGTT-C 954
consensus_8054#2      AAGACAACGAAGAACGGTTTGCTTCGC-ACAAT-GGTGTAAC-GCTGG-CGCTCAGTT-C 452
consensus_8054#1      AAGACAACGAAGAACGGTTTGCTTCGCCACAATTGGTGTAACAGCTGGGCGCTCAGTTTC 553
                      *************************** ***** ******** ***** ********* *

consensus_8054#0      TACCGGAG-CAATATCGATTGATCT--AAACGG-TCAGGTG--ACTA--TGAG---CTTA 1003
consensus_8054#2      TACCGGAG-CAATATCGATTGATCT--AAACGG-TCAGGTG--ACTA--TGAG---CTTA 501
consensus_8054#1      TACCGGAGGCAATATCG-TTGATCTTAAAACGGGCCAGGTGGAACTAATTGAAAGCCTTA 612
                      ******** ******** *******  ******  ******  ****  ***    ****

consensus_8054#0      T---GGGGTC---GAAACGCGC---ACTCCAA--GGTAGAA---CAGAA-TACTGG---A 1045
consensus_8054#2      T---GGGGTC---GAAACGCGC---AATCCAA--GGTAGAA---CAGAA-TACTGG---A 543
consensus_8054#1      TTGGGGGGTCCCAAAAACGCGCCACATCCCAAANGGTAGAAACACAGAAATACTGGGGCA 672
                      *   ******    ********   *  ****  *******   ***** ******   *

consensus_8054#0      ATCA-GCAT--GACTAGC---AGGTTATCTTTTG-----ATACATCTTTTG--CATCAGT 1092
consensus_8054#2      ATCA-GCAT--GACTAGC---AGGTTATCTTTTG-----ATACATACTTTNAGCATCAGT 592
consensus_8054#1      ATCAAGCATTGAACTAGCCAAGGGTGATCTTTTGGANTAACACATTCTTTT-GCACTCAG 731
                      **** ****   ******    *** ********     * ****  ***   **     

consensus_8054#0      TGATGTTCG---GTTCAGCTCCGTGCAGGCCCCGCAGCTGCATTTGTCTTCTGCTCTAGA 1149
consensus_8054#2      TGATGTTCG---GTTCAGCTCCGTGCAGGNCCCACAGCTGCATTTGTCTTCTGGTCTAGA 649
consensus_8054#1      TGANGTTCGCGGGTTCAACTCCCGGCAGGCCCC-CANATGAATTGGCACTCCGGACNAAA 790
                      *** *****   ***** ****  ***** *** **  ** *** *   ** *  * * *

consensus_8054#0      CTTCTCCGGTGATCCTGCTTTGTGCATGCAACTAGTTCAGCCCAAGAGTACACTCAAACA 1209
consensus_8054#2      CT---------------------------------------------------------- 651
consensus_8054#1      CTCTCACGG-GACACCGCTTGG-------------------------------------- 811
                      **                                                          

consensus_8054#0      TCGATTTGTCGGCACAATAGATTTAATAGGAACAAAGCACCAAGCATCACGCAAAACTAC 1269
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      GAAAACATTTAAGCTGAATGGATTAACGCATTCACTGAATAGGAAAAATAACGATATGTG 1329
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      TAATTTGATTTCAAAAAGCTGATACCGAGTCTCAAGTAAGCCATGACACGCGGATAGATT 1389
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      GCAAAAATAATTAACGAGGAAGTTAAGAAAATTAGGAAATTGTTCAAGCCGGGTAAAGTT 1449
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      AAATATGCAACTATCATAATGGACCATTCCTATGAAATCTCTTTTACATCACTTCACTTA 1509
consensus_8054#2      ------------------------------------------------------------
consensus_8054#1      ------------------------------------------------------------
                                                                                  

consensus_8054#0      CTGAATCTGACATT 1523
consensus_8054#2      --------------
consensus_8054#1      --------------
                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)