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Anopheles gambiae
cluster # 8056 cluster # 8056       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8056#0 length = 1887 sequences # 7  
consensus_8056#1 length = 618 sequences # 1  
consensus_8056#2 length = 595 sequences # 1  

consensusID : consensus_8056#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1887
fasta sequence
                              [CCGCGGACGCGTGGGCAGCAGCACCAGCAGGTTATCCACACCAAAAAGGTCCACATGTCCTCCACCACCTCCTCCTCCTCCTCGACGACGCTGAAGTCCGGTAGCGCGGGCGGAGCCGTGACAGAATGGAAGTAGCCGTGCCGTCGCAT--GGGTGTGTTCGTCCAGGAATATTTCGAGTAGTACCGCTTCAATGCGAATAGCTTAGTATTCTTACTTATTTTCATCAAGATATCGTGCCTCTAACATCGAAGTGTGCCACGCGCGACACGCTGACTTTGTTGTTGACTTTTAACTGTTTTTTTTTTTACTAGTGTGTAGTACGTGTATAAGTAGGCATAGACGACGCAAACCCGCACCACGCAAACGCGTGCTGTGAGTGTGGCGTGTGTGCGTGTGCGCGCTTGTTTTGTGTAGAAAAGAAACAAACAAACAAAAACATTGTGTAATATTTCCTCCCCGATACAGCTATTCATTAACGCCACTAAGTGCCACGTGTGTTTAATATTATTTTTGTAGTAGCAGTTGCGTGTGAAACAAGCAGAAAAGCTTTGCAAAATCCTGAAGCA-----AAACAAATAAACAAAAAAACTAGTTCA-TAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCGCACGTTTTTGACACAG--TTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGA--ATAGGTG-TTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTCG-ATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAATACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATAGATGCGCCTTTACCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTGTGTTTTTCGAAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAACTATT-ATTACAACAACTACTAGTACTACTACTACTATTTCTACTGCTATATGTTACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATACACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAACAAAAAGGACACATGGTTATACTAATATAGGTCAAGAAGGAGAAGAAGCACCGTCAGGAAGGGGTAGGGAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTTTCTGTACGTGTGCGTGTATGTGTGAGTGTATGAGTGTGCTGTACAACAATACAAAAGCCAGCCAATCTTTTTAGTAAGACAGACCGCCAAACATAATGTTAGTGTGTTTGGTTTTGGCTTGCTTTTAAGGTGTTTTTTGTTTTGTTTTGCGTCTGGTAAAGGAGAACTTACTTAACAAATCTAAAACGAAATGTGCTTCGAAAATAGTCAACTTTTTTTAGTATTAGTGTGTACTTTTACCGGTACTCTCAATTAGCAGCGATTTCAATGCGGTTGGGCCCGTGTTTTAATAATTCTAACGCAAAAAAAGAATAGCGCGTTAAAACCCGTTTAAGGAATGTT---TGTTTTTAGTTTAACTGAGCAAAACATGTTTTGTTTTTGTGCATTGTAACGATTAATTAATTACCTTTCCACACACATCCGGTTTTATGAGCTAATTTTTTGAGGTTAGACACGAAACACATTTTGCAAATAAAGAACCATGAAAGAAAATTAAATTTAAAAACCAAAAAAAAAAAAA]

[+] EMBL BM611215             [CCGCGGACGCGTGGGCAGCAGCACCAGCAGGTTATCCACACCAAAAAGGTCCACATGTCCTCCACCACCTCCTCCTCCTCCTCGACGACGCTGAAGTCCGGTAGCGCGGGCGGAGCCGTGACAGAATGGAAGTAGCCGTGCCGTCGCAT  GGGTGTGTTCGTCCAGGAATATTTCGAGTAGTACCGCTTCAATGCGAATAGCTTAGTATTCTTACTTATTTTCATCAAGATATCGTGCCTCTAACATCGAAGTGTGCCACGCGCGACACGCTGACTTTGTTGTTGACTTTTAACTGTTTTTTTTTTTACTAGTGTGTAGTACGTGTATAAGTAGGCATAGACGACGCAAACCCGCACCACGCAAACGCGTGCTGTGAGTGTGGCGTGTGTGCGTGTGCGCGCTTGTTTTGTGTAGAAAAGAAACAAACAAACAAAAACATTGTGTAATATTTCCTCCCCGATACAGCTATTCATTAACGCCACTAAGTGCCACGTGTGTTTAATATTATTTTTGTAGTAGCAGTTGCGTGTGAAACAAGCAGAAAAGCTTTGCAAAATCCTGAAGCA     AAACAAATAAACAAAAAAACTAGTTCATTAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCGCACGTTTTTGACACAGTTTTAGTATTGCAGTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM647678             [                                                                                                                                         ccGCGGACGCGTGGGGGTGTGTTCGTCCAGGAATATTTCGAGTAGTACCGCTTCAATGCGAATAGCTTAGTATTCTTACTTATTTTCATCAAGATATCGTGCCTCTAACATCGAAGTGTGCCACGCGCGACACGCTGACTTTGTTGTTGACTTTTAACTG   TTTTTTTTACTAGTGTGTAGTACGTGTATAAGTAGGCATAGACGACGCAAACCCGCACCACGCAAACGCGTGCTGTGAGTGTTGCGTGTGGGCGTGTGCGCGCTTGTTTTGTGTAGAAAAGAAACAAACAAACAAAAACATTGTGTAATATTTCCTCCCCGATACAGCTATTCATTAACGCCACTAAGTGCCACGTGTGTTTAATATTA TTTTGTAGTAGCAGTTGCGTGTGAAACAAGCAGAAAAGCTTTGCAGAATCGAGAAGCAAACACAAACAAATAAACAAAAAAACTAGTTCA TAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATATGTAACACACTAACGCGCACGTTTTTGACACAG  TTAGTA TGCAGTCAGATTTAGGGACAAAAAGAGAGATGGAATATAGGTG TTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAACTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX620609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTAGCAGTTGCGTGTGAAACAAGCAGAAAAGCTTTGCAAAATCCTGAAGCA     AAACAAATAAACAAAAAAACTAGTTCA TAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCGCACGTTTTTGACACAG  TTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGA  ATAGGTGTTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTCG ATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAATACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATAGATGCGCCTTTACCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTGTGTTTTTCGAAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAACTATT ATTACAACAACTACTAGTACTACTACTACTATTTCTACTGCTATATGTTACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AL693718             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cgaggcttAAAAATGC AGTATATTAGAGTAATGTGTAACACACTAACGCGCACGTTTTTGACACAG  TTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGA  ATAGGTGTTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTCGCATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAATACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATAGATGCGCCTTTACCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTGTGTTTTTCGAAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAACTATTCATTACAACAACTACTAGTACTACTACTACTATTTCTACTGCTATATGTTACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATACACGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX611422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCAATAGCCAGTATATAGATGCGCCTTTACCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTGTGTTTTTCGAAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAACTATT ATTACAACAACTACTAGTACTACTACTACTATTTCTACTGCTATATGTTACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATACACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAACAAAAAGGACACATGGTTATACTAATATAGGTCAAGAAGGAGAAGAAGCACCGTCAGGAAGGGGTAGGGAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTTTCTGTACGTGTGCGTGTATGTGTGAGTGTATGAGTGTGCTGTACAACAATACAAAAGCCAGCCAATCTTTTTAGTAAGACAGACCGCCAAACATAATGTTAGTGTGTTTGGTTTTGGCTTGCTTTTAAGGTG                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX609027             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATAGGTCAAGAAGGAGAAGAAGCACCGTCAGGAAGGGGTATGGAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTTTCTGTACGTGTGCGTGTATGTGTGAGTGTATGAGTGTGCTGTACAACAATACAAAAGCCAGCCAATCTTTTTAGTAAGACAGACCGCCAAACATAATGTTAGTGTGTTTGGTTTTGGCTTGCTTTTAAGGTGTTTTTTGTTTTGTTTTGCGTCTGGTAAAGGAGAACTTACTTAACAAATCTAAAACGAAATGTGCTTCGAAAATAGTCAACTTTTTTTAGTATTAGTGTGTACTTTTACCGGTACTCTCAATTAGCAGCGATTTCAATGCGGTTGGGCCCGTGTTTTAATAATTCTAACGCAAAAAAAGAATAGCGCGTTAAAACCCGTTTAAGGAATGTT   TGTTTTTAGTTTAACTGAGCAAAACATGTTTTGTTTTTGTGCATTGTAACGATTAATTAATTACCTTTCCACACACATCCGGTTTTATGAGCTAATTTTTTGAGGTTAGACACGAAACACATTTTGCAAATAAAGAACCATGAAAGAAAATTAAA                       ]
[-] EMBL CNS09F8D             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gaaAATATTTTTAGTAAGACAGACCCCCAAACATAATGTTAGTGTGTTTGGTTTTGGCTTGCTTTTAAGGT TTTTTTGTTTTGTTTTGCGTCTGGTAAAGGAGGACTTACTTAACAAATCTAAAACGAAATGTGCTTCGAAAATAGTCAACTTTTTTTAGTATTAGTGTGTACTTTTACCGGTACTCTCAATTAGCAGCGATTTCAATGCGGTTGGGCCCGTGTTTTAATAATTCTAACGCAAAAAAAGAATAGCGCGTTAAAACCCGTTTAAGGAATGTTTTCTTTTTTTAGTTTAACTGAGCAAAACATGTTTTGTTTTTGTGCATTGTAACGATTAATTAATTACCTTTCCACACACAACCGGTTTTATGAGCTAATTTTTTGAGGTTAGACCCGAAACACATTTTGCAAATAAAGAACCATGAAAGAAAATTAAATTTAAAAACCAAAAAAAAAAAAA]


>consensus_8056#0 CCGCGGACGCGTGGGCAGCAGCACCAGCAGGTTATCCACACCAAAAAGGTCCACATGTCC TCCACCACCTCCTCCTCCTCCTCGACGACGCTGAAGTCCGGTAGCGCGGGCGGAGCCGTG ACAGAATGGAAGTAGCCGTGCCGTCGCATGGGTGTGTTCGTCCAGGAATATTTCGAGTAG TACCGCTTCAATGCGAATAGCTTAGTATTCTTACTTATTTTCATCAAGATATCGTGCCTC TAACATCGAAGTGTGCCACGCGCGACACGCTGACTTTGTTGTTGACTTTTAACTGTTTTT TTTTTTACTAGTGTGTAGTACGTGTATAAGTAGGCATAGACGACGCAAACCCGCACCACG CAAACGCGTGCTGTGAGTGTGGCGTGTGTGCGTGTGCGCGCTTGTTTTGTGTAGAAAAGA AACAAACAAACAAAAACATTGTGTAATATTTCCTCCCCGATACAGCTATTCATTAACGCC ACTAAGTGCCACGTGTGTTTAATATTATTTTTGTAGTAGCAGTTGCGTGTGAAACAAGCA GAAAAGCTTTGCAAAATCCTGAAGCAAAACAAATAAACAAAAAAACTAGTTCATAACAGA GAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCG CACGTTTTTGACACAGTTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGAATA GGTGTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTC GATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAAT ACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATA GATGCGCCTTTACCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTAAATATGCCAA CGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCA CGTGTGTTTTTCGAAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAA CTATTATTACAACAACTACTAGTACTACTACTACTATTTCTACTGCTATATGTTACTAGA CACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATACACGATG CGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAACAAAAAGGACACATGGTTA TACTAATATAGGTCAAGAAGGAGAAGAAGCACCGTCAGGAAGGGGTAGGGAAGGGATTGA AACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTTTCTGTACGTGTGC GTGTATGTGTGAGTGTATGAGTGTGCTGTACAACAATACAAAAGCCAGCCAATCTTTTTA GTAAGACAGACCGCCAAACATAATGTTAGTGTGTTTGGTTTTGGCTTGCTTTTAAGGTGT TTTTTGTTTTGTTTTGCGTCTGGTAAAGGAGAACTTACTTAACAAATCTAAAACGAAATG TGCTTCGAAAATAGTCAACTTTTTTTAGTATTAGTGTGTACTTTTACCGGTACTCTCAAT TAGCAGCGATTTCAATGCGGTTGGGCCCGTGTTTTAATAATTCTAACGCAAAAAAAGAAT AGCGCGTTAAAACCCGTTTAAGGAATGTTTGTTTTTAGTTTAACTGAGCAAAACATGTTT TGTTTTTGTGCATTGTAACGATTAATTAATTACCTTTCCACACACATCCGGTTTTATGAG CTAATTTTTTGAGGTTAGACACGAAACACATTTTGCAAATAAAGAACCATGAAAGAAAAT TAAATTTAAAAACCAAAAAAAAAAAAA



consensusID : consensus_8056#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence
                              [ACTGGTGCGTTTTTTTCTTTGCTACACATCCGTGCAATTTCAATAGCCAGTATATAGATGCGCCTTTCCCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTTAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTGTGTTTTTCGAAGATAATATTGAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAACTATTACTACAACTACTACTACAACTACTATTACTATTTCTATTGCTATATGTTACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATACACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAACAAAAAGGACACATGGTTATACTAATATAGGTCAAGAAGGAGAAGAAGAAGCACCACCGTCAGGAAGGGGTAGGAAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTTTCTGTACGTGTGCGTGTATGTGTGAGTGTGTGTGTGTGTGATGTACAACAATACAAAAGCCAGCCAATCTTTTTAGTA]

[+] EMBL CNS09F8C             [ACTGGTGCGTTTTTTTCTTTGCTACACATCCGTGCAATTTCAATAGCCAGTATATAGATGCGCCTTTCCCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTTAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTGTGTTTTTCGAAGATAATATTGAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAACTTACAACTATTACTACAACTACTACTACAACTACTATTACTATTTCTATTGCTATATGTTACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATACACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAACAAAAAGGACACATGGTTATACTAATATAGGTCAAGAAGGAGAAGAAGAAGCACCACCGTCAGGAAGGGGTAGGAAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTTTCTGTACGTGTGCGTGTATGTGTGAGTGTGTGTGTGTGTGATGTACAACAATACAAAAGCCAGCCAATCTTTTTAGTA]


>consensus_8056#1 ACTGGTGCGTTTTTTTCTTTGCTACACATCCGTGCAATTTCAATAGCCAGTATATAGATG CGCCTTTCCCATTTTGTGCCGAACGCAAAACAAATTTAAACTACTTAATATGCCAACGAT TGCCAAAACAACAAAATTAAGAGAGCCGAAAGCAGCCTTGAAAAAAGCGAGTTGCACGTG TGTTTTTCGAAGATAATATTGAGATAATATCGTAAGTGCCATTTTTTGTAACAACTTCAA CTTACAACTATTACTACAACTACTACTACAACTACTATTACTATTTCTATTGCTATATGT TACTAGACACGTGGTTCTTCTTAATGCGAGGTAAACTTAATACGATTTAGTCGAACGATA CACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAACAAAAAGGACAC ATGGTTATACTAATATAGGTCAAGAAGGAGAAGAAGAAGCACCACCGTCAGGAAGGGGTA GGAAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGGAATTGTTTTATTT TCTGTACGTGTGCGTGTATGTGTGAGTGTGTGTGTGTGTGATGTACAACAATACAAAAGC CAGCCAATCTTTTTAGTA



consensusID : consensus_8056#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 595
fasta sequence
                              [GATCGGCCCCGGAGCTNNACAAATCCTGAAGCAAAACAANCTAAACAAAAAACTAGTTCATAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCGCACGTTTTTGACACAGTTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGAATAGGTGTTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTCGATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAATACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATAGATAGCGCCTTTACCATTNNGTGCCGAACGCAAAACAAATTTANACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCACGGCCTTGAAAACAAGCGAGTTGCACNGTGTGTCATTNCGAACGATAANTATCGTAAGTGCCACTATTANCACAGTAAACAAGCTTCAACTATACAACTATTATTACAACAAACCTACTACGGTACTA]

[+] EMBL BX466435             [GATCGGCCCCGGAGCTNNACAAATCCTGAAGCAAAACAANCTAAACAAAAAACTAGTTCATAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCGCACGTTTTTGACACAGTTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGAATAGGTGTTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTCGATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAATACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATAGATAGCGCCTTTACCATTNNGTGCCGAACGCAAAACAAATTTANACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCACGGCCTTGAAAACAAGCGAGTTGCACNGTGTGTCATTNCGAACGATAANTATCGTAAGTGCCACTATTANCACAGTAAACAAGCTTCAACTATACAACTATTATTACAACAAACCTACTACGGTACTA]


>consensus_8056#2 GATCGGCCCCGGAGCTNNACAAATCCTGAAGCAAAACAANCTAAACAAAAAACTAGTTCA TAACAGAGAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACAC TAACGCGCACGTTTTTGACACAGTTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGA TGGAATAGGTGTTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAA TGTGCCTCGATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGA GTGAAAATACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCC AGTATATAGATAGCGCCTTTACCATTNNGTGCCGAACGCAAAACAAATTTANACTACTAA ATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAAGCACGGCCTTGAAAAC AAGCGAGTTGCACNGTGTGTCATTNCGAACGATAANTATCGTAAGTGCCACTATTANCAC AGTAAACAAGCTTCAACTATACAACTATTATTACAACAAACCTACTACGGTACTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8056#0      CCGCGGACGCGTGGGCAGCAGCACCAGCAGGTTATCCACACCAAAAAGGTCCACATGTCC 60
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      TCCACCACCTCCTCCTCCTCCTCGACGACGCTGAAGTCCGGTAGCGCGGGCGGAGCCGTG 120
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      ACAGAATGGAAGTAGCCGTGCCGTCGCATGGGTGTGTTCGTCCAGGAATATTTCGAGTAG 180
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      TACCGCTTCAATGCGAATAGCTTAGTATTCTTACTTATTTTCATCAAGATATCGTGCCTC 240
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      TAACATCGAAGTGTGCCACGCGCGACACGCTGACTTTGTTGTTGACTTTTAACTGTTTTT 300
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      TTTTTTACTAGTGTGTAGTACGTGTATAAGTAGGCATAGACGACGCAAACCCGCACCACG 360
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      CAAACGCGTGCTGTGAGTGTGGCGTGTGTGCGTGTGCGCGCTTGTTTTGTGTAGAAAAGA 420
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      AACAAACAAACAAAAACATTGTGTAATATTTCCTCCCCGATACAGCTATTCATTAACGCC 480
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      ACTAAGTGCCACGTGTGTTTAATATTATTTTTGTAGTAGCAGTTGCGTGTGAAACAAGCA 540
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      GAAAAGCTTTGCAAAATCCTGAAGCAAAACAAATAAACAAAAAAACTAGTTCATAACAGA 600
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      GAGGTTAATATATTCGGAAAAATGCAAGTATATTAGAGTAATGTGTAACACACTAACGCG 660
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      CACGTTTTTGACACAGTTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGATGGAATA 720
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      GGTGTTTATTAGCAAACAAATTTTGAACGCGTGTGTGTGCAAAATTCACTAATGTGCCTC 780
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      GATTGTACTCACGATTTGCCTTCCACTGGGAACTGTCGAATATGCCGGATGAGTGAAAAT 840
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ---------------------------------------------------------GAT 3
                                                                                  

consensus_8056#0      ACACACGTTTGCGTGCGTTTCTTTGCTACACATCCGTGAAATTTCAATAGCCAGTATATA 900
consensus_8056#1      ----ACTGGTGCGTTTTTTTCTTTGCTACACATCCGTGCAATTTCAATAGCCAGTATATA 56
consensus_8056#2      CGGCCCCGGAGCTNNACAAATCCTGAAGCAAAACAANCTAAACA-AAAAACTAGTTCATA 62
                           *    **           **   ** * *     **    ** * * ***  ***

consensus_8056#0      GATGCGCCTTTACCATTTTGTGCCGAACGCAAAACAAATTTAAAC--TACTAAATATGCC 958
consensus_8056#1      GATGCGCCTTTCCCATTTTGTGCCGAACGCAAAACAAATTTAAAC--TACTTAATATGCC 114
consensus_8056#2      ACAGAGAGGTTAATATATTCGGAAAAATGCAAG-TATATTAGAGTAATGTGTAACACACT 121
                         * *   **   ** **  *   ** ****   * ***  *    *    ** *  * 

consensus_8056#0      AACGATTGCCAAAACAACAAAATTAAGAG---AGCCGAAAGCAGCCTTGAAAAAAGCGA- 1014
consensus_8056#1      AACGATTGCCAAAACAACAAAATTAAGAG---AGCCGAAAGCAGCCTTGAAAAAAGCGA- 170
consensus_8056#2      AACGCGCACGTTTTTGACACAGTTAGTATTGCAGTCAGATTTAGGGACGAAAAGAGAGAT 181
                      ****    *       *** * ***  *    ** *  *   **    ***** ** ** 

consensus_8056#0      GTTGCACGTGTGTTTTTCGAAGATAATAT-----------CGTAAGTGCCATTTTTTGTA 1063
consensus_8056#1      GTTGCACGTGTGTTTTTCGAAGATAATATTGAGATAATATCGTAAGTGCCATTTTTTGTA 230
consensus_8056#2      GGAATAGGTGTTTTATTAGCAAACAAATTTTGAACGC--GTGTGTGTGCAAAATTCACTA 239
                      *    * **** ** ** * * * **  *            **  **** *  **   **

consensus_8056#0      ACAACTTCAACTTACAACTATTATTACAACAACTACTAGTACTACTACT-ACTATTTCTA 1122
consensus_8056#1      ACAACTTCAACTTACAACTATTACTACAACTACTACTACAACTACTATT-ACTATTTCTA 289
consensus_8056#2      ATGTGCCTCGATTGTACTCACGATT-TGCCTTCCACTGGGA--ACTGTCGAATATGCCGG 296
                      *          **  *   *  * *    *  * ***   *  ***    * ***  *  

consensus_8056#0      CTGCTATATGTTACTAGACACGTG-GTTCTTCTTAATGCGAGGTAAACTTAATACGATTT 1181
consensus_8056#1      TTGCTATATGTTACTAGACACGTG-GTTCTTCTTAATGCGAGGTAAACTTAATACGATTT 348
consensus_8056#2      ATGAGTGAAAATAC-ACACGTTTGCGTGCGTTTCTTTGCTACACA---TCCGTGAAATTT 352
                       **    *   *** * **   ** ** * * *   *** *   *   *   *   ****

consensus_8056#0      AGTCGAACGATACACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAA 1241
consensus_8056#1      AGTCGAACGATACACGATGCGAGTTGAGTTGAGTTTAGCCTCACTCTCGAAACACTTAAA 408
consensus_8056#2      CAATAGCCAGTATATAGATAGCGCC--------TTTACCATTNNGTGCCGAACGCAAAAC 404
                             *  ** *      * *          **** * *      *  *** *  ** 

consensus_8056#0      CAAAAAGGACACATGGTTATACTAATATAGGTCAAGA-AGGAGAAGAAG------CACCG 1294
consensus_8056#1      CAAAAAGGACACATGGTTATACTAATATAGGTCAAGA-AGGAGAAGAAGAAGCACCACCG 467
consensus_8056#2      AAATTTANACTACTAAATATGCCAACGATTGCCAAAACAACAAAATTAAGAGAGCCGAAA 464
                       **     **   *   *** * **     * *** * *  * **  *       *    

consensus_8056#0      TCAGGAAGGGGTAGGGAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGG 1354
consensus_8056#1      TCAGGAAGGGGTAGGAAAGGGATTGAAACAGTCTCCCGACCCTTGACCGAGAGACCGTGG 527
consensus_8056#2      GCACGGCCTTGAAAACAAGCGAGTTGCACNGTGTGTCA--TTNCGAACGATAANTATCGT 522
                       ** *     * *   *** ** *   ** ** *  *       ** *** *      * 

consensus_8056#0      AATTGTT-TTATTTTCT--GTACGTGTGCGTGTA-TGTGTGAGTGTATGAGTGTGC--TG 1408
consensus_8056#1      AATTGTT-TTATTTTCT--GTACGTGTGCGTGTA-TGTGTGAGTGTGTGTGTGTGTGATG 583
consensus_8056#2      AAGTGCCACTATTANCACAGTAAACAAGCTTCAACTATACAACTATTATTACAACAAACC 582
                      ** **    ****  *   ***     ** *  * * *   * * *              

consensus_8056#0      TACAACAATACAAAAGCCAGCCAATCTTTTTAGTAAGACAGACCGCCAAACATAATGTTA 1468
consensus_8056#1      TACAACAATACAAAAGCCAGCCAATCTTTTTAGTA------------------------- 618
consensus_8056#2      TACTACGGTACTA----------------------------------------------- 595
                      *** **  *** *                                               

consensus_8056#0      GTGTGTTTGGTTTTGGCTTGCTTTTAAGGTGTTTTTTGTTTTGTTTTGCGTCTGGTAAAG 1528
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      GAGAACTTACTTAACAAATCTAAAACGAAATGTGCTTCGAAAATAGTCAACTTTTTTTAG 1588
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      TATTAGTGTGTACTTTTACCGGTACTCTCAATTAGCAGCGATTTCAATGCGGTTGGGCCC 1648
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      GTGTTTTAATAATTCTAACGCAAAAAAAGAATAGCGCGTTAAAACCCGTTTAAGGAATGT 1708
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      TTGTTTTTAGTTTAACTGAGCAAAACATGTTTTGTTTTTGTGCATTGTAACGATTAATTA 1768
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      ATTACCTTTCCACACACATCCGGTTTTATGAGCTAATTTTTTGAGGTTAGACACGAAACA 1828
consensus_8056#1      ------------------------------------------------------------
consensus_8056#2      ------------------------------------------------------------
                                                                                  

consensus_8056#0      CATTTTGCAAATAAAGAACCATGAAAGAAAATTAAATTTAAAAACCAAAAAAAAAAAAA 1887
consensus_8056#1      -----------------------------------------------------------
consensus_8056#2      -----------------------------------------------------------
                                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)