cluster # 8059

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Anopheles gambiae
cluster # 8059 cluster # 8059 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8059#0 length = 1573 sequences # 5

consensus_8059#1 length = 1379 sequences # 2
consensus_8059#2 length = 610 sequences # 2

consensusID : consensus_8059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1573
fasta sequence

                              [GAATCGCCCGAGGCTACGGGTGTCCGTCAAAAAATGTAACAAACAATTGCTCAAAAATCAATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAA-TTAAGCTACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTCGAGCGTTTGGGTCGTCGAAGAATTTGCGCGTTCATCAGCTGGTTCGCTCGAACGTGCACATCCGCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGCACTGACGATCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCTGCTTTAAAACGGGCCAGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGCTTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTGGGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTGTCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGACGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAATCATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATAGAAATTAAAACTTAAAA]

[+] EMBL AL932344             [GAATCGCCCGAGGCTACGGGTGTCCGTCAAAAAATGTAACAAACAATTGCTCAAAAATCAATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08H6V             [                                                   tatAAATCAATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAA TTAAGCTACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTCGAGCGTTTGGGTCGTCGAAGAATTTGCGCGTACATCAGCTGGTTCGCTCGAACGTGCACATCCGCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGCACTGACGATCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAACTGTGCGAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS090FY             [                                                             TTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAAAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAA TTAAGCTACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTCGAGCGTTTGGGTCGTCGAAGAATTTGCGCGTTCATCAGCTGGTTCGCTCGAACGTGCACATCCGCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGCACTGACGATCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS090FZ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCATGCTACCAACGAAAAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTTAAG TACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTCGAGCGTTTGGGTCGTCGAAGAATTTGCGCGTTCATCAGCTGGTTCGCTCGAACGTGCACATCCGCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGCACTGACGATCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCTGCTTTAAAACGGGCCAGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGCTTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTGGGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTGTCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGACGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAATCATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATAGAAATT           ]
[-] EMBL CNS08H6W             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCGATTAAACGCCCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACAAACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTTAAG TACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTCGAGCGTTTGGGTCGTCGAAGAATTTGCGCGTTCATCAGCTGGTTCGCTCGAACGTGCACATCCGCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGAACTGACGATCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCCGCTTTAAAACGGGCCAGAACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGCTTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTGGGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTGTCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGACGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAATCATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATAGAAATTAAAACTTAAAA]




>consensus_8059#0
GAATCGCCCGAGGCTACGGGTGTCCGTCAAAAAATGTAACAAACAATTGCTCAAAAATCA
ATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAG
TGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGT
ACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAG
AAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGT
CGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGC
ACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAG
CAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGG
CCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTC
AGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACC
AGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCG
ATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGA
GCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAGCTAC
GCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTCGAG
CGTTTGGGTCGTCGAAGAATTTGCGCGTTCATCAGCTGGTTCGCTCGAACGTGCACATCC
GCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGCACTGACGATCC
ACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAGCGCTTCT
ACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAAT
GTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGT
GCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCTGCTTTAAAACGGGCC
AGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGCTTGT
GTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTGGGAG
CAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTGTCGA
TGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGACGGT
TTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAATCATT
TGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATAGAAA
TTAAAACTTAAAA

consensusID : consensus_8059#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1379
fasta sequence

                              [AAAAATCAATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAGCTACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCCGCTTTAAAACGGGCCAGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGCTTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTGGGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTGTCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGACGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAATCATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATAGAAATTAAAACGTAAAAACGCAAAAGAAGTATAAG]

[+] EMBL CNS08SKT             [AAAAATCAATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAGCTACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCCGCTTTAAAACGGGCCAGCACTTACGGTTGCAT                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08SKU             [                                                                                                                                                                                                                                                                                                                                                                             TTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTTCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAG TACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCG AAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCCGCTTTAAAACGGGCCAGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGCTTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTGGGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTGTCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGACGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAATCATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATAGAAATTAAAACGTAAAAACGCAAAAGAAGTATAAG]




>consensus_8059#1
AAAAATCAATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCA
GTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTT
CCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACA
GATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCA
AATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGCTGCACAGCGATGGGACACTGT
GTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAG
AATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATT
GTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTT
CGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGCTACCAGCGATTAAACGACCTGG
AATGTAATGCTGCTGAGCAAGAGGAACCTTCACTAGTCATCGATCTACTGCCCCTGGAGG
CATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTCAGAGCTTCACCGACGAACCAG
CGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAGCTACGCAAAAATCGCGAAAATC
AAGAGCCAGGAAGACCGTTCAAGTGCCACGAACGGACCCACACCGGCGAGCGTCCGTTTG
CGTGCGAGCTGTGCGAAAAAGCGCTTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATC
TGCCACCGTGACGAGCAGCCGTTCGAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAG
CGAAACATGAAGGAGCATCTGCAGCTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGT
GAGTGTAGTGCCCGCTTTAAAACGGGCCAGCACTTACGGTTGCATCAACGGTTGCACACG
GGCGAGAAACCGTACGCCTGTAGCTTGTGTTCGAAACGATTCTATCACATTTCGGACCGA
AAGCGGCACGAGTTGTCGCACGTGGGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCA
TCGTACACGCGCAAGCACGCACTGTCGATGCACGAGCGGACGCATACGGGCGAGCAGCCG
TTCGGTTGCGCAGAATGTGGAAGACGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTA
GCGCGTTGTGGTCATGGTGGAAATCATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGT
GAAGAGGATTAATCGCCGAAAATAGAAATTAAAACGTAAAAACGCAAAAGAAGTATAAG

consensusID : consensus_8059#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 610
fasta sequence

                              [TCCCCCGA-GT--AAT--GATATGTGTCTGCAGCAGT-AAAT-CAGTGTA-AGTGTGTTTG-AACA-GGCAC-AGCGAT-AGGACGGAC-AACGGCGT-AC-TTTCCAACGGTACATNAATGGCTT-ACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCA-AAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGGCTACCAGCGATTAAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAAACCTTCACTATCATCGATCTACTGCCCCTGGAGGCTCCAATCTTCGTC]

[+] EMBL AL933730             [TCCCCCGA GT  AAT  GATATGTGTCTGCAGCAGT AAAT CAGTGTA AGTGTGTTTG AACA GGCAC AGCGAT AGGACGGAC AACGGCGT AC TTTCCAACGGTACATNAATGGCTT ACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCA AAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGGCTACCAGCGATTAAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAAACCTTCACTATCATCGATCTACTGCCCCTGGAGGCTCCAATCTTCGTC]
[+] EMBL AL932472             [tcggCCGAGGTCAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAGTGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGTACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCACAGCGGCTGTCCTTCGGGTACGAACACGGGTAGA                                                                                                                    ]




>consensus_8059#2
TCCCCCGAGTAATGATATGTGTCTGCAGCAGTAAATCAGTGTAAGTGTGTTTGAACAGGC
ACAGCGATAGGACGGACAACGGCGTACTTTCCAACGGTACATNAATGGCTTACAATCGGA
GAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAGAAGATGATTCGTTTCCACAAAGC
ATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGTCGATGTTTCGGGACCGATTGCTA
ACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGCACAGCGATGGGACACTGTGTGCA
AAACGTATGTCGAGGAATCTATCGCATCGTGCACAGCAACGTCTGCTACGCGAGAATCGT
TGGAACAAGATTCTACCACGATCGAACGGCTAACGGCCTGTCTATGTAGCGATTGTGGGA
AGCAGATCGACGACACCGAACCGACGTATCTGTTTCAGCAGAGCGGCTGTCCTTCGGGTA
CGAACACGGGTAGAGTGATGTGTCAAGCATGGCTACCAGCGATTAAAACGACCTGGAATG
TAATGCTGCTGAGCAAGAGGAAACCTTCACTATCATCGATCTACTGCCCCTGGAGGCTCC
AATCTTCGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8059#0      GAATCGCCCGAGGCTACGGGTGTCCGTCAAAAAATGTAACAAACAATTGCTCAAAAATCA 60
consensus_8059#1      ----------------------------------------------------AAAAATCA 8
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      ATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAG 120
consensus_8059#1      ATTTCTTCAGGATAAATCGAAATTGGATATGTGTCTGCAGCAGTAAAATGCAGTGTAGAG 68
consensus_8059#2      ------------TCCCCCGAGTAATGATATGTGTCTGCAGCAGTAAAT--CAGTGTA-AG 45
                                  *    ***     **********************   ******* **

consensus_8059#0      TGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGT 180
consensus_8059#1      TGTGTTTGAAACAGGGCACAAGCGATGAGGACGGACAAACGGCGTCACTTTTCCAATCGT 128
consensus_8059#2      TGTGTTTGAAC--AGGCACA-GCGAT-AGGACGGACAA-CGGCGT--ACTTTCCAACGGT 98
                      **********    ****** ***** *********** ******    *******  **

consensus_8059#0      ACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAG 240
consensus_8059#1      ACATAAATGGCTTAACAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAG 188
consensus_8059#2      ACATNAATGGCTTA-CAATCGGAGAGTTGCTGAACGATTTGTTCGGTGTACAGATAGCAG 157
                      **** ********* *********************************************

consensus_8059#0      AAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGT 300
consensus_8059#1      AAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGT 248
consensus_8059#2      AAGATGATTCGTTTCCACAAAGCATCTGCGCAAGATGCCACATCGAGCTGCAAATGGTGT 217
                      ************************************************************

consensus_8059#0      CGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGC 360
consensus_8059#1      CGATGTTTCGGGACCGATTGCTAACCTCAG--------------------------CTGC 282
consensus_8059#2      CGATGTTTCGGGACCGATTGCTAACCTCAGACAGCACTCTGCGCACATCGGCCCAGCTGC 277
                      ******************************                          ****

consensus_8059#0      ACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAG 420
consensus_8059#1      ACAGCGATGGGACACTGTGTGCAGAAACGTATGTCGAGGAATCTATCGCATCGTGCACAG 342
consensus_8059#2      ACAGCGATGGGACACTGTGTGCA-AAACGTATGTCGAGGAATCTATCGCATCGTGCACAG 336
                      *********************** ************************************

consensus_8059#0      CAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGG 480
consensus_8059#1      CAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGG 402
consensus_8059#2      CAACGTCTGCTACGCGAGAATCGTTGGAACAAGATTCTACCACGATCGAACGGCTAACGG 396
                      ************************************************************

consensus_8059#0      CCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTC 540
consensus_8059#1      CCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTC 462
consensus_8059#2      CCTGTCTATGTAGCGATTGTGGGAAGCAGATCGACGACACCGAACCGACGTATCTGTTTC 456
                      ************************************************************

consensus_8059#0      AGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATG-CTAC 599
consensus_8059#1      AGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATG-CTAC 521
consensus_8059#2      AGCAGAGCGGCTGTCCTTCGGGTACGAACACGGGTAGAGTGATGTGTCAAGCATGGCTAC 516
                      ******************************************************* ****

consensus_8059#0      CAGCGATTAAA-CGACCTGGAATGTAATGCTGCTGAGCAAGAGGAA-CCTTCACTAGTCA 657
consensus_8059#1      CAGCGATTAAA-CGACCTGGAATGTAATGCTGCTGAGCAAGAGGAA-CCTTCACTAGTCA 579
consensus_8059#2      CAGCGATTAAAACGACCTGGAATGTAATGCTGCTGAGCAAGAGGAAACCTTCACTA-TCA 575
                      *********** ********************************** ********* ***

consensus_8059#0      TCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTC 717
consensus_8059#1      TCGATCTACTGCCCCTGGAGGCATCAAATCTTCGTTTCTGCTGCGTTACACACTGCTCTC 639
consensus_8059#2      TCGATCTACTGCCCCTGGAGGC-TCCAATCTTCGTC------------------------ 610
                      ********************** ** *********                         

consensus_8059#0      AGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAGC 777
consensus_8059#1      AGAGCTTCACCGACGAACCAGCGCTGATAAAACACGCGCAGGAAATGCACGCAATTAAGC 699
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACGTGTGCTTTC 837
consensus_8059#1      TACGCAAAAATCGCGAAAATCAAGAGCCAGGAAGACCGTTCAAGTGCCACG--------- 750
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GAGCGTTTGGGTCGTCGAAGAATTTGCGCGTTCATCAGCTGGTTCGCTCGAACGTGCACA 897
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TCCGCAATTTCGCGTGCAAGCTGTGCTGCTTCCGGGCCGGCAGCTCAGCAGCACTGACGA 957
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TCCACGAACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAA-GCGC 1016
consensus_8059#1      ------AACGGACCCACACCGGCGAGCGTCCGTTTGCGTGCGAGCTGTGCGAAAAAGCGC 804
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTC 1076
consensus_8059#1      TTCTACTCGGAGGCAAATCTGAAGTCCCATCAAATCTGCCACCGTGACGAGCAGCCGTTC 864
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAG 1136
consensus_8059#1      GAATGTTGCTACTGTGAGAAGCGGTTTGCTCGGAAGCGAAACATGAAGGAGCATCTGCAG 924
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCTGCTTTAAAACG 1196
consensus_8059#1      CTGTGCCACTCGGAGGAGAAACCGTACCAGTGTGGTGAGTGTAGTGCCCGCTTTAAAACG 984
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GGCCAGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGC 1256
consensus_8059#1      GGCCAGCACTTACGGTTGCATCAACGGTTGCACACGGGCGAGAAACCGTACGCCTGTAGC 1044
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTG 1316
consensus_8059#1      TTGTGTTCGAAACGATTCTATCACATTTCGGACCGAAAGCGGCACGAGTTGTCGCACGTG 1104
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTG 1376
consensus_8059#1      GGAGCAAAACCGTTTAGCTGCGGGATTTGTGGCGCATCGTACACGCGCAAGCACGCACTG 1164
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGA 1436
consensus_8059#1      TCGATGCACGAGCGGACGCATACGGGCGAGCAGCCGTTCGGTTGCGCAGAATGTGGAAGA 1224
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAAT 1496
consensus_8059#1      CGGTTTACGCAAGCTGTTTTGCTGAAGAGGCATGTAGCGCGTTGTGGTCATGGTGGAAAT 1284
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATA 1556
consensus_8059#1      CATTTGGCGAGCAAACAGCAGGGCGGTCTGTCTGGTGAAGAGGATTAATCGCCGAAAATA 1344
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GAAATTAAAACTTAAAA------------------ 1573
consensus_8059#1      GAAATTAAAACGTAAAAACGCAAAAGAAGTATAAG 1379
consensus_8059#2      -----------------------------------