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Anopheles gambiae
cluster # 8070 cluster # 8070       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8070#0 length = 2221 sequences # 7  
consensus_8070#1 length = 705 sequences # 1  
consensus_8070#2 length = 452 sequences # 1  

consensusID : consensus_8070#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2221
fasta sequence
                              [CCGTGCAAACGCCGTCCGCCGAGATTGTGCTTCCTTGCTGAGCTGAAGTGGCGGAACTTTCACTACGGGCCCGTCAGTCGCATCGTCGTTGTTTGTGTGAAGTTTAGTGTGATTAGTGTGTAAAATTCTGTTGAGAATTTGATTGATCATACAACAGAATCACCTGTACAGAGTGTGATCTGTACCTGGGCGATCACTTAGCATGAGCAGCCATTAACAC-------CATTGTGCAAAAACGGTTTGCCGTTGATTTGTTCCTTCAATTACGTGCTAGTCAATTACCCTTTCGATCGGTTTGCTCATTAGCTGTGGTGATTCAATCATACCGAAGTGCTGAAACTCACCCTGCTCGATCGATCGGCAACCAGTTGCGGCCAGACACGATGGATACCGAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCGGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATCCACCGTGGTACTTCTGCATCATGATGGCGCTACAGCACTATCTAACGATGATAGGGGCGATTGTTTCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCGGCCCGCGGTACGATCATTTCCACCATGATCTTCGTCACCGGGCTGATCACGTACCTGCAGGCAACGTGGGGCTGCCGATTGCCCCTCGTCCAGGGCGGCACGATCTCGTTTCTCGTGCCGACGCTCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCGGCCGACGCAATCGACGCGATGACCGACACCGACCGCACCGAGCTGTGGCAGGTGCGGATGCGCGAGCTGTCCGGTGCGATTGCCGTGGCGGCCGTGACACAGCTCGTGCTCGGATTCAGCGGGCTGGTGGGGAAGCTGCTGCGCATCATCACGCCGCTGACGATCGTCCCCACGGTGGCGCTGGTCGGTATAACGCTCTTCCAGCATGCCAGTGAAACCGCCTCCAAGCAGTGGGGCATCGCCGTCGGCACGACCGCC-ATGCTGACGCTGTTCTCGCAGGTCATGGGCGAGGTGCCGTTCCCGGGCATTGCCTACCGCAAGGGGCACGGTTTGCGCGTGGTCTGGTTCCCGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTGTGCGGCGTGCTGACGGCGACGGGCGTTTTCCCCGAGGGGCACCCGGCCCGTACCGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGGTTCCGCGTACCGTACCCGGGCCAGTTCGGACTGCCGACCGTGTCGCTGGCGGGCGTGCTGGGCATGCTGGCGGGCGTGCTGGCCTGCACGGTCGAATCGATCAGCTACTATCCGACGATAGCGCAGATGTGTGCGGCGCCACCGCCACCCCTGCACGCCATCAACCGGGGCATCGGCATCGAGGGGCTCGGCACGATGCTGGCGGGGCTGTGGGGCTCCGGCAACGGGACCAACACGTTCGGCGAGAACGTCGGTGCGATCGGCGTGACGAAGGTGGGCAGCCGGCGGGTCATACAGTGGGCCGCCCTCATCATGGTGCTGCAGGGCGTGCTGAACAAGTTCGGGGCTGCGTTCATCATGATCCCGGATCCGGTGGTCGGTGGCATCTTTTGCGTCATGTTCGGCATGATCACGGCGTTCGGGCTGGCCGCGCTGCAGTACGTCGATCTGCGCTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTT-CCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGGTCGACTCCACGCTCTCGGTACTGCTCGGCATGACCATCCTCGTCGGGGGTGTGCTTGGTTGTGTGCTGGACAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAGGAGATGGCCCTCGAGACGGTACAGGCCAACGATGACTTGCCGGCGGGTGGTCTCGCGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTGTGCAGCTAATGAGAAGATGGAAGTGGACCCGATACGTACCGTTCCTGCCGACGTACAGAATGAAGCTCTGAGTGGGGACATACATACAGGTCAAAGGGCGAGTCCTTTTCTCGGATACACCGCCCTGGAGACCCACTTTAACGCCGTTGCGATGTACGGAATTTGGCATGGCATGCCACGCATCCAGGCGGGTTGATTC]

[+] EMBL BM632812             [CCGTGCAAACGCCGTCCGCCGAGATTGTGCTTCCTTGCTGAGCTGAAGTGGCGGAACTTTCACTACGGGCCCGTCAGTCGCATCGTCGTTGTTTGTGTGAAGTTTAGTGTGATTAGTGTGTAAAATTCTGTTGAGAATTTGATTGATCATACAACAGAATCACCTGTACAGAGTGTGATCTGTACCTGGGCGATCACTTAGCATGAGCAGCCATTAACAC       CATTGTGCAAAAACGGTTTGCCGTTGATTTGTTCCTTCAATTACGTGCTAGTCAATTACCCTTTCGATCGGTTTGCTCATTAGCTGTGGTGATTCAATCATACCGAAGTGCTGAAACTCACCCTGCTCGATCGATCGGCAACCAGTTGCGGCCAGACACGATGGATACCGAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCGGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATCCACCGTGGTACTTCTGCATCATGATGGCGCTACAGCACTATCTAACGATGATAGGGGCGATTGTTTCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM625808             [                         ccgGCTTCCTTCCTGAGCTGAAGTGGCGGAACTTTCACTACAGGCCCGTCAGTCGCGCCGTCGTTGTTTGTGTGAAGT         TTAGTGTGTAAAACGCTGTTGAGAATTTGAGTGATCGTAGAACAGAATCACCTGTACAGAGTGTGATTTGTACCTGGGCGATCACTTAGCATGAGCAGCAATTAACACCTCTCTACAGTGTGCAAAAACGGTTTGCCGTTGATTTGTTCCTTCAATTACGTGCTAGTCAATTACCCTTTCGATCGGTTTGCTCATTAGCTGTGGTGATTCAATCATACCGAAGTGCTGAAACTCACCCTGCTCGATCGATCGGCAACCAGTTGCGGCCAGACACGATGGATACAGAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCTGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATCCGCCGTGGTACTTCTGCATCATGATGGCGCTACAGCACTATCTAACGATGATAGGGGCGATCGTATCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCGGCCCGCGGTACGATCATTTCCACCATGATCTTCGTCACCGGGCTGATCACGTACCTGCAGGCAACGTGGGGCTGCCGATTGCCCCTCGTCCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM611996             [                                                                                                                                                                                                                                                                                                                                                                                                   ccGGATACCGAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCGGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATCCACCGTGGTACTTCTGCATCATGATGGCGCTACAGCACTATCTAACGATGATAGGGGCGATTGTTTCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCGGCCCGCGGTACGATCATTTCCACCATGATCTTCGTCACCGGGCTGATCACGTACCTGCAGGCAACGTGGGGCTGCCGATTGCCCCTCGTCCAGGGCGGCACGATCTCGTTTCTCGTGCCGACGCTCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCGGCCGACGCAATCGACGCGATGACCGACACCGACCGCACCGAGCTGTGGCAGGTGCGGATGCGCGAGCTGTCCGGTGCGATTGCCGTGGCGGCCGTGACACAGCTCGTGCTCGGATTCAGCGGGCTGGTGGGGAAGCTGCTGCGCATCATCACGCCGCTGACGATCGTCCCCACGGTGGCGCTGGTCGGCATAACGCTCTTCCAGCATGCCAGTGAAACCGCCTCCAAGCAGGGGGGCATCGCCGTCGGCACGACCGCCAATGCTGACGCTGTTCTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AF533893             [                                                                                                                                                                                                                                                                                                                                                                                                            GAGCGGCAGTGTGCACCGGAACAGCCAACCGAAAGCAAGCCTGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATCCACCGTGGTACCTCTGCATCATGATGGCGCTACAGCACTATCTAACAATGATAGGGGCGATCGTTTCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCGGCCCGCGGTACGATCATCTCCACCATGATCTTCGTCACCGGGCTAATAACGTACCTGCAGGCAACGTGGGGCTGCCGATTGCCCCTCGTCCAGGGCGGCACGATCTCGTTTCTCGTGCCGACGCTCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCGGACGACGCAATCAACGCGATGACCGACACCGACCGCACCGAGCTGTGGCAGGTGCGGATGCGCGAACTGTCCGGTGCGATTGCCGTGGCGGCCGTGACACAGCTCGTCCTCGGATTCAGCGGGCTGGTGGGGAAGCTGCTGCGCATCATCACGCCTCTGACGATCGTCCCCACGGTGGCGCTGGTCGGTATAACGCTCTTCCAGCATGCCAGTGAAACCGCCTCCAAGCAGTGGGGCATCGCCGTCGGCACGACCGCC ATGCTGACGCTGTTCTCGCAGGTCATGGGCGAGGTGCCGTTCCCGGGCATTGCCTACCGCAAGGGGCACGGTTTGCGCGTGGTCTGGTTCCCGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTGTGCGGCGTGCTGACGGCGACGGGCGTTTTCCCCGAGGGGCACCCGGCCCGTACCGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGGTTCCGCGTACCGTACCCGGGCCAGTTCGGACTGCCGACCGTGTCGCTGGCGGGCGTGCTGGGCATGCTGGCGGGCGTGCTGGCCTGCACGGTCGAATCGATCAGCTACTATCCGACGATAGCGCAGATGTGTGCGGCGCCACCGCCACCCCTGCACGCCATCAACCGGGGCATCGGCATCGAGGGACTCGGCACGATGCTGGCGGGGCTGTGGGGCTCCGGCAACGGGACCAACACGTTCGGCGAGAACGTCGGTGCGATCGGCGTGACGAAGGTGGGCAGCCGGCGGGTCATACAGTGGGCCGCCCTCATCATGGTGCTGCAGGGCGTGCTGAACAAGTTCGGGGCTGCGTTCATCATGATCCCGGATCCGGTGGTCGGTGGCATCTTTTGCGTCATGTTCGGCATGATCACGGCGTTCGGGCTGGCCGCGCTGCAGTACGTCGATCTGCGCTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTT CCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGGTCGACTCCACGCTCTCGGTACTGCTCGGCATGACCATCCTCGTCGGGGGTGTGCTTGGTTGTGTGCTGGACAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAGGAGATGGCCCTCGAGACGGTACAGGCCAACGATGACTTGCCGGCGGGTGGTCTCGCGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTGTGCAGCTAATGAGAAGATGGAAGTGGACCCGATACGTACCGTTCCTGCCGACGTACAGAAT                                                                                                                                          ]
[+] EMBL BM653720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgGACGATCGTACCCACGGTGGCGCTGGTCGGTATAACGCTCTTCCAGCATGCCAGTGAAACGGCCTCCAAGCAGTGGGGCATCGCCGTCGGCACGACCGCC ATGCTGACGCTGTTCTCGCAGGTCATGGGCGAGGTGCCGTTCCCGGGCATTGCCTACCGCAAGGGGCACGGTTTGCGCGTGGTCTGGTTCCCGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTGTGCGGCGTGCTGACGGCGACGGGCGTCTTCCCCGAGGGGCACCCGGCCCGTACCGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGGTTCCGCGTACCGTACCCGGGCCAGTTCGGACTGCCGACCGTGTCGCTGGCGGGCGTGCTGGGCATGCTGGCGGGCGTGCTGGCCTGCACGGTCGAATCGATCAGCTACTATCCGACGATAGCGCAGATGTGTGCGGCGCCACCGCCACCCCTGCACGCCATCAACCGGGGCATCGGCATCGAGGGGCTCGGCACGATGCTGGCGGGGCTGTGGGGCTCCGGCAACGGGACCAACACGTTCGGCGAGAACGTCGGTGCGATCGGCGTGACGAAGGTGGGCAGCCGGCGGGTCATACAGTGGGCCGCCCTCATCATGGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM579285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgCCGAGGGGCACCCGGCCCGTACCGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGGTTCCGCGTACCGTACCCGGGCCAGTTCGGACTGCCGACCGTGTCGCTGGCGGGCGTGCTGGGCATGCTGGCGGGCGTGCTGGCCTGCACGGTCGAATCGATCAGCTACTATCCGACGATAGCGCAGATGTGTGCGGCGCCACCGCCACCCCTGCACGCCATCAACCGGGGCATCGGCATCGAGGGGCTCGGCACGATGCTGGCGGGGCTGTGGGGCTCCGGCAACGGGACCAACACGTTCGGCGAGAACGTCGGTGCGATCGGCGTGACGAAGGTGGGCAGCCGGCGGGTCATACAGTGGGCCGCCCTCATCATGGTGCTGCAGGGCGTGCTGAACAAGTTCGGGGCTGCGTTCATCATGATCCCGGATCCGGTGGTCGGTGGCATCTTTTGCGTCATGTTCGGCATGATCACGGCGTTCGGGCTGGCCGCGCTGCAGTACGTCGATCTGCGCTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTTCCCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM578717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgGCTGAACAAGTTCGGGGCTGCGTTCATCATGATCCCGGATCCGGTGGTCGGTGGCATCTTTTGCGTCATGTTCGGCATGATCACGGCGTTCGGGCTGGCCGCGCTGCAGTACGTCGATCTGCGCTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTT CCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGGTCGACTCCACGCTCTCGGTACTGCTCGGCACGACCATCCTCGTCGGGGGTGTGCTTGGTTGTGTGCTGGACAATATGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAGGAGATGGCCCTCGAGACGGCGCAGGACAACGATGACTTGCCGGCGGGTGGTCTCGCGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTATGCAGCTAATGAGAAGATGGAAGTGGACCCGATACGTACCGTTCCTGCCAACGTACAGAATGAAGCTCTGAGTGGGGACATACATACAGGTCAAAGGGCGAGTCCTTTTCTCGGATACACCGCCCTGGAGACCCACTTTAACGCCGTTGCGATGTACGGAATTTGGCATGGCATGCCACGCATCCAGGCGGGTTGATTC]


>consensus_8070#0 CCGTGCAAACGCCGTCCGCCGAGATTGTGCTTCCTTGCTGAGCTGAAGTGGCGGAACTTT CACTACGGGCCCGTCAGTCGCATCGTCGTTGTTTGTGTGAAGTTTAGTGTGATTAGTGTG TAAAATTCTGTTGAGAATTTGATTGATCATACAACAGAATCACCTGTACAGAGTGTGATC TGTACCTGGGCGATCACTTAGCATGAGCAGCCATTAACACCATTGTGCAAAAACGGTTTG CCGTTGATTTGTTCCTTCAATTACGTGCTAGTCAATTACCCTTTCGATCGGTTTGCTCAT TAGCTGTGGTGATTCAATCATACCGAAGTGCTGAAACTCACCCTGCTCGATCGATCGGCA ACCAGTTGCGGCCAGACACGATGGATACCGAGCGGCAGTGTGCACCGGAACAGTCAACCG AAAGCAAGCCGGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATC CACCGTGGTACTTCTGCATCATGATGGCGCTACAGCACTATCTAACGATGATAGGGGCGA TTGTTTCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCGGCCC GCGGTACGATCATTTCCACCATGATCTTCGTCACCGGGCTGATCACGTACCTGCAGGCAA CGTGGGGCTGCCGATTGCCCCTCGTCCAGGGCGGCACGATCTCGTTTCTCGTGCCGACGC TCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCGGCCGACGCAATCGACGCGATGA CCGACACCGACCGCACCGAGCTGTGGCAGGTGCGGATGCGCGAGCTGTCCGGTGCGATTG CCGTGGCGGCCGTGACACAGCTCGTGCTCGGATTCAGCGGGCTGGTGGGGAAGCTGCTGC GCATCATCACGCCGCTGACGATCGTCCCCACGGTGGCGCTGGTCGGTATAACGCTCTTCC AGCATGCCAGTGAAACCGCCTCCAAGCAGTGGGGCATCGCCGTCGGCACGACCGCCATGC TGACGCTGTTCTCGCAGGTCATGGGCGAGGTGCCGTTCCCGGGCATTGCCTACCGCAAGG GGCACGGTTTGCGCGTGGTCTGGTTCCCGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGA TCGCCATCATGTGGACGGTGTGCGGCGTGCTGACGGCGACGGGCGTTTTCCCCGAGGGGC ACCCGGCCCGTACCGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGGTTCCGCGTAC CGTACCCGGGCCAGTTCGGACTGCCGACCGTGTCGCTGGCGGGCGTGCTGGGCATGCTGG CGGGCGTGCTGGCCTGCACGGTCGAATCGATCAGCTACTATCCGACGATAGCGCAGATGT GTGCGGCGCCACCGCCACCCCTGCACGCCATCAACCGGGGCATCGGCATCGAGGGGCTCG GCACGATGCTGGCGGGGCTGTGGGGCTCCGGCAACGGGACCAACACGTTCGGCGAGAACG TCGGTGCGATCGGCGTGACGAAGGTGGGCAGCCGGCGGGTCATACAGTGGGCCGCCCTCA TCATGGTGCTGCAGGGCGTGCTGAACAAGTTCGGGGCTGCGTTCATCATGATCCCGGATC CGGTGGTCGGTGGCATCTTTTGCGTCATGTTCGGCATGATCACGGCGTTCGGGCTGGCCG CGCTGCAGTACGTCGATCTGCGCTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCT TCTTCCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCA ATCAGACGGTCGACTCCACGCTCTCGGTACTGCTCGGCATGACCATCCTCGTCGGGGGTG TGCTTGGTTGTGTGCTGGACAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCG CTTGGTCGAAGGAGATGGCCCTCGAGACGGTACAGGCCAACGATGACTTGCCGGCGGGTG GTCTCGCGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTGTGCAGCTAATGAGAAGAT GGAAGTGGACCCGATACGTACCGTTCCTGCCGACGTACAGAATGAAGCTCTGAGTGGGGA CATACATACAGGTCAAAGGGCGAGTCCTTTTCTCGGATACACCGCCCTGGAGACCCACTT TAACGCCGTTGCGATGTACGGAATTTGGCATGGCATGCCACGCATCCAGGCGGGTTGATT C



consensusID : consensus_8070#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 705
fasta sequence
                              [AGAATTGCCACGAGGTTTTTTCTCGTGCCGACGCTCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCTGGCCTGACGCAATCTGACGCTGATGACCTGACACCTGACCTGCACCTGAGCTGTGTGCAGTGTGCTGGATGCTGCGAGCTGTCCTGGTGCTGATTGCCTGTGGCTGGCCTGTGACACATGCTCGTGCTCGNGATTCAGCTGGACTGGTGTGGAAATGCTTGCTGCGCATCATCACGCCGCTGACTGATCTGTACCCACTGGTGGCTGCTGGTCTGGTATAACTGCTCTTCCAGCATGCCAGTGAAACGGCTCCAAGCAGTGGGTGCATCTGCCTGTCTGGCACTGACCTGCCATGCTGACGCTGTTCTCGCAGGTCATGGGCGAGNGTGCCGTTCCCTGGGCATTGCCTACCTGCAAGGGGCACGGTTTGCGCGTGGTCTGGTTCCCTGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTGTGCGGCTGTGCTGACTGGCTGACTGGGCTGTCTTTCCCGAGGGGCACCTGGCCCTGTACCTGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGTTCCGCGTACCGTACCCGGGCCAGTTCGGGCTGCTGACCGTGTCGCTGGCGGGCTGTGCTGGGCATTCTGGGCGGCTGTGCTGGCTGCACGGGTCGA]

[+] EMBL AL931723             [AGAATTGCCACGAGGTTTTTTCTCGTGCCGACGCTCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCTGGCCTGACGCAATCTGACGCTGATGACCTGACACCTGACCTGCACCTGAGCTGTGTGCAGTGTGCTGGATGCTGCGAGCTGTCCTGGTGCTGATTGCCTGTGGCTGGCCTGTGACACATGCTCGTGCTCGNGATTCAGCTGGACTGGTGTGGAAATGCTTGCTGCGCATCATCACGCCGCTGACTGATCTGTACCCACTGGTGGCTGCTGGTCTGGTATAACTGCTCTTCCAGCATGCCAGTGAAACGGCTCCAAGCAGTGGGTGCATCTGCCTGTCTGGCACTGACCTGCCATGCTGACGCTGTTCTCGCAGGTCATGGGCGAGNGTGCCGTTCCCTGGGCATTGCCTACCTGCAAGGGGCACGGTTTGCGCGTGGTCTGGTTCCCTGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTGTGCGGCTGTGCTGACTGGCTGACTGGGCTGTCTTTCCCGAGGGGCACCTGGCCCTGTACCTGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGTTCCGCGTACCGTACCCGGGCCAGTTCGGGCTGCTGACCGTGTCGCTGGCGGGCTGTGCTGGGCATTCTGGGCGGCTGTGCTGGCTGCACGGGTCGA]


>consensus_8070#1 AGAATTGCCACGAGGTTTTTTCTCGTGCCGACGCTCGCCATCCTGAACCTGCCCCAGTGG AAGTGTCCACCTGGCCTGACGCAATCTGACGCTGATGACCTGACACCTGACCTGCACCTG AGCTGTGTGCAGTGTGCTGGATGCTGCGAGCTGTCCTGGTGCTGATTGCCTGTGGCTGGC CTGTGACACATGCTCGTGCTCGNGATTCAGCTGGACTGGTGTGGAAATGCTTGCTGCGCA TCATCACGCCGCTGACTGATCTGTACCCACTGGTGGCTGCTGGTCTGGTATAACTGCTCT TCCAGCATGCCAGTGAAACGGCTCCAAGCAGTGGGTGCATCTGCCTGTCTGGCACTGACC TGCCATGCTGACGCTGTTCTCGCAGGTCATGGGCGAGNGTGCCGTTCCCTGGGCATTGCC TACCTGCAAGGGGCACGGTTTGCGCGTGGTCTGGTTCCCTGCTGTTCAAGCTGTTTCCCG TGCTGCTCACGATCGCCATCATGTGGACGGTGTGCGGCTGTGCTGACTGGCTGACTGGGC TGTCTTTCCCGAGGGGCACCTGGCCCTGTACCTGATGTGCGGTTGCGCGTGCTGCAGGAC GCGGAGTGTTCCGCGTACCGTACCCGGGCCAGTTCGGGCTGCTGACCGTGTCGCTGGCGG GCTGTGCTGGGCATTCTGGGCGGCTGTGCTGGCTGCACGGGTCGA



consensusID : consensus_8070#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 452
fasta sequence
                              [GAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCTGAAGGCAAGGCACGTGGTGCGGACATCAACTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTTCCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGGTCGACTCCACGCTCTCGGTACTGCTCGGCACGACCATCCTCGTCGGGGGTGTGCTTGGCTGTGTGCTGGATAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAGGAGATGGCCCTCGAGACGGCGCAGGACAACGATGACTTGCCGGCGGGTGGTCTCGCGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTATGCAGCTAATGAGAAGATGGAAGTGGACCCGATACGTACCGTTCCTGCCGACGTACAGAAT]

[+] EMBL AF533894             [GAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCTGAAGGCAAGGCACGTGGTGCGGACATCAACTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTTCCCGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGGTCGACTCCACGCTCTCGGTACTGCTCGGCACGACCATCCTCGTCGGGGGTGTGCTTGGCTGTGTGCTGGATAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAGGAGATGGCCCTCGAGACGGCGCAGGACAACGATGACTTGCCGGCGGGTGGTCTCGCGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTATGCAGCTAATGAGAAGATGGAAGTGGACCCGATACGTACCGTTCCTGCCGACGTACAGAAT]


>consensus_8070#2 GAGCGGCAGTGTGCACCGGAACAGTCAACCGAAAGCAAGCCTGAAGGCAAGGCACGTGGT GCGGACATCAACTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTTCCCGCTC GTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGACGGTC GACTCCACGCTCTCGGTACTGCTCGGCACGACCATCCTCGTCGGGGGTGTGCTTGGCTGT GTGCTGGATAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAG GAGATGGCCCTCGAGACGGCGCAGGACAACGATGACTTGCCGGCGGGTGGTCTCGCGTGG GAGAAAAGCACGTTCGATTTCCCGTATGGTATGCAGCTAATGAGAAGATGGAAGTGGACC CGATACGTACCGTTCCTGCCGACGTACAGAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8070#0      CCGTGCAAACGCCGTCCGCCGAGATTGTGCTTCCTTGCTGAGCTGAAGTGGCGGAACTTT 60
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CACTACGGGCCCGTCAGTCGCATCGTCGTTGTTTGTGTGAAGTTTAGTGTGATTAGTGTG 120
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TAAAATTCTGTTGAGAATTTGATTGATCATACAACAGAATCACCTGTACAGAGTGTGATC 180
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TGTACCTGGGCGATCACTTAGCATGAGCAGCCATTAACACCATTGTGCAAAAACGGTTTG 240
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CCGTTGATTTGTTCCTTCAATTACGTGCTAGTCAATTACCCTTTCGATCGGTTTGCTCAT 300
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TAGCTGTGGTGATTCAATCATACCGAAGTGCTGAAACTCACCCTGCTCGATCGATCGGCA 360
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      ACCAGTTGCGGCCAGACACGATGGATACCGAGCGGCAGTGTGCACCGGAACAGTCAACCG 420
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      AAAGCAAGCCGGAAGGCAAGGCACGTGGTGCGGACATCAACTATGGCATCGACGACAATC 480
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CACCGTGGTACTTCTGCATCATGATGGCGCTACAGCACTATCTAACGATGATAGGGGCGA 540
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TTGTTTCGATTCCGTTCATTCTGACGCCCGCCCTGTGCATGAGGGATGAAGATCCGGCCC 600
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      GCGGTACGATCATTTCCACCATGATCTTCGTCACCGGGCTGATCACGTACCTGCAGGCAA 660
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGTGGGGCTGCCGATTGCCCCTCGTCCAGGGCGGCACGATCTCGTTTCTCGTGCCGACGC 720
consensus_8070#1      --------------------------AGAATTGCCACGAGGTTTTTTCTCGTGCCGACGC 34
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCGG--CCGACGCAATC-GACGC-G 776
consensus_8070#1      TCGCCATCCTGAACCTGCCCCAGTGGAAGTGTCCACCTGGCCTGACGCAATCTGACGCTG 94
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      ATGACC-GACACC-GACC-GCACC-GAGCTGTG-GCAG-GTGC-GGATGC-GCGAGCTGT 828
consensus_8070#1      ATGACCTGACACCTGACCTGCACCTGAGCTGTGTGCAGTGTGCTGGATGCTGCGAGCTGT 154
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CC-GGTGC-GATTGCC-GTGGCGG--CCGTGACACA-GCTCGTGCTCGG-ATTCAGC-GG 880
consensus_8070#1      CCTGGTGCTGATTGCCTGTGGCTGGCCTGTGACACATGCTCGTGCTCGNGATTCAGCTGG 214
consensus_8070#2      ---------------GAGCGGCAG---TGTGCACCGGAACAGTCAACCGAA---AGCAAG 39
                                       * *** *    ***   *      **   *   *   ***  *

consensus_8070#0      GCTGGTGGGGAAGC---TGCTGCGCATCATCACGCCGCTGAC-GATC-GTCCCCAC-GGT 934
consensus_8070#1      ACTGGTGTGGAAATGCTTGCTGCGCATCATCACGCCGCTGACTGATCTGTACCCACTGGT 274
consensus_8070#2      CCTGAAGGCAAGGCACGTGGTGCGGA-CATCAACTCCTCGCGCAATCTGTACATACTGGG 98
                       ***  *   *      ** **** * *****   *   *    *** ** *  ** ** 

consensus_8070#0      GGC-GCTGGTC-GGTATAAC-GCTCTTCCAGCATGCCAGTGAAACCGCCTCCAAGCAGTG 991
consensus_8070#1      GGCTGCTGGTCTGGTATAACTGCTCTTCCAGCATGCCAGTGAAACGGC-TCCAAGCAGTG 333
consensus_8070#2      CGT-GTCGTTC--TTCTTCCCGCTCGTGCTG--TGCCTGTG--GCTGC--AGGAGCATCC 149
                       *  *  * **   * *  * **** * * *  **** ***   * **     ****   

consensus_8070#0      GG-GCATCG--CCGTC-GGCAC-GACC-GCCATGCTGACGCTGTTCTCGCAGGTCATGGG 1045
consensus_8070#1      GGTGCATCTGCCTGTCTGGCACTGACCTGCCATGCTGACGCTGTTCTCGCAGGTCATGGG 393
consensus_8070#2      GG-GCGCGATCCAGACGGGCAATCAGACGGTCGACT--CCACGCTCTCGGTACTGCTCGG 206
                      ** **      * * * ****   *   *     **  *   * *****    *  * **

consensus_8070#0      CGAGG-TGCCGTTCCC-GGGCATTGCCTACC-GCAAGGGGCACGGTTTG-CGCGTGGTCT 1101
consensus_8070#1      CGAGNGTGCCGTTCCCTGGGCATTGCCTACCTGCAAGGGGCACGGTTTG-CGCGTGGTCT 452
consensus_8070#2      CACGACCATCCTCGTCGGGGGTGTGCTTGGCTGTGTGCTGGATAATCTGATACCCGGCAC 266
                      *  *     * *   * ***   *** *  * *   *  * *   * **   *  **   

consensus_8070#0      GGTTCCC-GCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTG 1160
consensus_8070#1      GGTTCCCTGCTGTTCAAGCTGTTTCCCGTGCTGCTCACGATCGCCATCATGTGGACGGTG 512
consensus_8070#2      G--CCGGAGGAGCGTGGCCTTGTCGCTTGGTCGAAGGAGATGGCCCTCG---AGACGGCG 321
                      *   *   *  *      **  *  *   *  *     *** *** **     ***** *

consensus_8070#0      TGCGGC-GTGCTGACGG--CGACGGG--CGTTTTCCCCGAGGGGCACCCG-GCCC-GTAC 1213
consensus_8070#1      TGCGGCTGTGCTGACTGGCTGACTGGGCTGTCTTTCCCGAGGGGCACCTG-GCCCTGTAC 571
consensus_8070#2      CAGGACAACGATGACTTGCCGGCGGG-TGGTCTCGCGTGGGAGAAAAGCACGTTCGATTT 380
                         * *   * ****     * * **   ** *  *  * * *  *     *  *  *  

consensus_8070#0      C-GATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTGGTTCCG---CGTACCGTACCCGG 1269
consensus_8070#1      CTGATGTGCGGTTGCGCGTGCTGCAGGACGCGGAGTG-TTCCG---CGTACCGTACCCGG 627
consensus_8070#2      CCCGTATG-GTATGCAGCTAATGAGAAGATGGAAGTGGACCCGATACGTACCGTTCCTGC 439
                      *   * ** *  ***   *  **        * ****   ***   ******** ** * 

consensus_8070#0      GCCAGTTCGGACTGCCGACCGTGTCGCTGGCGGGC-GTGCTGGGCATGCTGG-CGGGCGT 1327
consensus_8070#1      GCCAGTTCGGGCTGCTGACCGTGTCGCTGGCGGGCTGTGCTGGGCATTCTGGGCGGCTGT 687
consensus_8070#2      CGACGTACAGAAT----------------------------------------------- 452
                          ** * *  *                                               

consensus_8070#0      GCTGGCCTGCACGG-TCGAATCGATCAGCTACTATCCGACGATAGCGCAGATGTGTGCGG 1386
consensus_8070#1      GCTGGC-TGCACGGGTCGA----------------------------------------- 705
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGCCACCGCCACCCCTGCACGCCATCAACCGGGGCATCGGCATCGAGGGGCTCGGCACGA 1446
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TGCTGGCGGGGCTGTGGGGCTCCGGCAACGGGACCAACACGTTCGGCGAGAACGTCGGTG 1506
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGATCGGCGTGACGAAGGTGGGCAGCCGGCGGGTCATACAGTGGGCCGCCCTCATCATGG 1566
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TGCTGCAGGGCGTGCTGAACAAGTTCGGGGCTGCGTTCATCATGATCCCGGATCCGGTGG 1626
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TCGGTGGCATCTTTTGCGTCATGTTCGGCATGATCACGGCGTTCGGGCTGGCCGCGCTGC 1686
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      AGTACGTCGATCTGCGCTCCTCGCGCAATCTGTACATACTGGGCGTGTCGTTCTTCTTCC 1746
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGCTCGTGCTGTGCCTGTGGCTGCAGGAGCATCCGGGCGCGATCCAGACGGGCAATCAGA 1806
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGGTCGACTCCACGCTCTCGGTACTGCTCGGCATGACCATCCTCGTCGGGGGTGTGCTTG 1866
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      GTTGTGTGCTGGACAATCTGATACCCGGCACGCCGGAGGAGCGTGGCCTTGTCGCTTGGT 1926
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGAAGGAGATGGCCCTCGAGACGGTACAGGCCAACGATGACTTGCCGGCGGGTGGTCTCG 1986
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGTGGGAGAAAAGCACGTTCGATTTCCCGTATGGTGTGCAGCTAATGAGAAGATGGAAGT 2046
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      GGACCCGATACGTACCGTTCCTGCCGACGTACAGAATGAAGCTCTGAGTGGGGACATACA 2106
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      TACAGGTCAAAGGGCGAGTCCTTTTCTCGGATACACCGCCCTGGAGACCCACTTTAACGC 2166
consensus_8070#1      ------------------------------------------------------------
consensus_8070#2      ------------------------------------------------------------
                                                                                  

consensus_8070#0      CGTTGCGATGTACGGAATTTGGCATGGCATGCCACGCATCCAGGCGGGTTGATTC 2221
consensus_8070#1      -------------------------------------------------------
consensus_8070#2      -------------------------------------------------------
                                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)