cluster # 8075

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Anopheles gambiae
cluster # 8075 cluster # 8075 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8075#0 length = 1736 sequences # 4
consensus_8075#1 length = 1032 sequences # 3

consensus_8075#2 length = 683 sequences # 1
consensus_8075#3 length = 631 sequences # 1

consensusID : consensus_8075#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1736
fasta sequence

                              [CGGATGATTATTTCTTGCTTAATTTAGTATCTAACGATTGTTTGATTTCATTCGTTACAACAAGAGTTTCATTGCGTAGTAGATGTACACAT-AAATCTCTCTAAATTTAGAGCTACGAATGCGGCTCCTATCAAATGAATCGAACCAGTAATTAAAATATCGCAGGTTTCACCTTTAAATACAAAGTCTTCATCGATTTGCTTGAAAACAGATTCAATTGATTCATGCGGGAAACCCTCTTTATGTTGAATTGTCTGACTCCAATATTCATAATTTTGCCTGCACCGCTGTAATTGAAGCTCGAATGGAAAATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTAGGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGAGTAGAAAGTAGCTTTGCTGAGTCTCTGTCTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTGTTGGCTATGGGATTTCATATTATACCATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAAAGTGTCTTTTTTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCAATGCCTTCCACTGTTTGTTTTGTAACAATTCGGACG--CTGTTTTCTTGTGATATTTCGGAAATATTCTTGTTCATCCAATTTGTAGCTATCTGAATAGCTAATGAGGTGTTCAATTCAAGAATATCAAGGATATCACACGATTCGTTAACCAATTCTGGTTTCTTAGTTTTCTGGTATGCTTTTAATTCTGATGGTACGACGAACAGATTTGCCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCAGTTTTGTGTGCTCCAAACCAAGCGAAG-TTATACCTACGGTACCAGTTTTAGGTAAAACATTCGTACAGTCATATCTACCTCCGATGCCCACCTCAATGACGCATACATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTCAAGAAACAAAAATATGACGGCATATCTCTGCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAAATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAATGATCCATGGAAAAATAAATACGCAACAAATACTTGAGCGTGTCGTTTATATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGACTGGAGTTGGATTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAACGTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAGAAATCGAAGCCGTTTCACATGTAAATTTATTCATCATTTTTCTCCACCTCACAGTAAAATCAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGAACTTGTATTTTGCATCCACACTTTATAAATCGGCATTTTTCACGTGATA]

[-] EMBL BM642474             [CGGATGATTATTTCTTGCTTAATTTAGTATCTAACGATTGTTTGATTTCATTCGTTACAACAAGAGTTTCATTGCGTAGTAGATGTACACAT AAATCTCTCTAAATTTAGAGCTACGAATGCGGCTCCTATCAAATGAATCGAACCAGTAATTAAAATATCGCAGGTTTCACCTTTAAATACAAAGTCTTCATCGATTTGCTTGAAAACAGATTCAATTGATTCATGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM584950             [                                                                         GCGTAGTAGATGTACACATAAAATCTCTCTAAATTTAGAGCTACGAATGCGGCTCCTATCAAATGAATCGAGCCAGTAATTAAAATATCGCAGGTTTCACCTTTAAATACAAAGTCTTCATCGATTTGCTTGAAAACAGATTCAATTGATTCATGTAGGAAACCCTCTTTATGTTGAATTGTCTGACTCCAATATTCATAATTTTGCCTGCACCGCTGTAATTGAAGCTCGAATGGAAAATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTAGGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGAGTAGAAAGTAGCTTTGCTGAGTCTCTGTCTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTGTTGGCTATGGGATTTCATATTATACCATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAAAGTGTCTTTTTTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCAATGCCTTCCACTGTTTGTTTTGTAACAATTCGGACG  C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS095ZF             [                                                                                                                                                                                                                                                                                                                                                                                                              AAAGAGTAGAAAGTAGCTTTGCTGAGTCTCTGTCTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTATTGGCTATGGGATTTCATATTATACCATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAAAGTGTCTTTTTTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCAATGCCTTCCACTGTTTGTTTTGTAACAATT  GATGTTATGTTTTCTTGTGATATTTCGGAAATATTCTTGTTCATCCAATTTGTAGCTATCTGAATAGCTAATGAGGTGTTCAATTCAAGAATATCAAGGATATCACACGATTCGTTAACCAATTCTGGTTTCTTAGTTTTCTGGTATGCTTTTAATTCTGATGGTACGACGAACAGATTTGCCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCAGTTTTGTGTGCTCCAAACCAAGCGAAG TTATACCTACGGTACCAGTTTTAGGTAAAACATTCGTACAGTCATATCTACCTCCGATGCCCACCTCAATGACGCATACATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTCAAGAAACAAAAATATGACGGCATATCTCTGCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAAATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAGTT                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS095ZE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCAGTTTTGTGTGCTCCAAACCAAGCGAAGTTTATA CTACGGTACCAGTTTTAGGTAAAACATTCGTACAGTCATATCTACCTCCGATGCCCACCTCAATGACGCATACATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTCAAGAAACAAAAATATGACGGCATATCTCTGCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAAATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAATGATCCATGGAAAAATAAATACGCAACAAATACTTGAGCGTGTCGTTTATATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGACTGGAGTTGGATTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAACGTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAGAAATCGAAGCCGTTTCACATGTAAATTTATTCATCATTTTTCTCCACCTCACAGTAAAATCAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGAACTTGTATTTTGCATCCACACTTTATAAATCGGCATTTTTCACGTGATA]




>consensus_8075#0
CGGATGATTATTTCTTGCTTAATTTAGTATCTAACGATTGTTTGATTTCATTCGTTACAA
CAAGAGTTTCATTGCGTAGTAGATGTACACATAAATCTCTCTAAATTTAGAGCTACGAAT
GCGGCTCCTATCAAATGAATCGAACCAGTAATTAAAATATCGCAGGTTTCACCTTTAAAT
ACAAAGTCTTCATCGATTTGCTTGAAAACAGATTCAATTGATTCATGCGGGAAACCCTCT
TTATGTTGAATTGTCTGACTCCAATATTCATAATTTTGCCTGCACCGCTGTAATTGAAGC
TCGAATGGAAAATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTA
GGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGAGTAGAAAGTAGCTTTGCT
GAGTCTCTGTCTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTGTTGGCTATGGGATTTC
ATATTATACCATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAA
AGTGTCTTTTTTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCA
ATGCCTTCCACTGTTTGTTTTGTAACAATTCGGACGCTGTTTTCTTGTGATATTTCGGAA
ATATTCTTGTTCATCCAATTTGTAGCTATCTGAATAGCTAATGAGGTGTTCAATTCAAGA
ATATCAAGGATATCACACGATTCGTTAACCAATTCTGGTTTCTTAGTTTTCTGGTATGCT
TTTAATTCTGATGGTACGACGAACAGATTTGCCTTTAACTTACGACATTCTTCCCTTATA
ATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAGAGCCACGTTTTATTATA
CCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCAGTTTTGTGTGCTCCAAA
CCAAGCGAAGTTATACCTACGGTACCAGTTTTAGGTAAAACATTCGTACAGTCATATCTA
CCTCCGATGCCCACCTCAATGACGCATACATCAACACTTTCTCGTAGAAACACATCCAAG
GCCAAAATTGTCAAGAAACAAAAATATGACGGCATATCTCTGCTATGCTCTCGATATGCA
AGTAATTGTTTATAAATTTTCCAAAAATATAAACGAAATTTATCACTCGATAGAGGCATT
CCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTA
CGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTTCCCTTT
GTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAATGATCCATGGAAAAATAAATACGC
AACAAATACTTGAGCGTGTCGTTTATATGCTTATTGTCTTCACTATGTTTTCGAAGAATT
GAATCTTGAAGAACGACTGGAGTTGGATTGTAATGAGTTTAATGAAGAAATTGCATTCTC
GTAGCTCTCGTCTAGAGTAGATGCAACGTTGGAACCTTTCATTGTTGACAATAGGTGCGA
TTTAACGCTAGAAACATGCAACAAAGAAATCGAAGCCGTTTCACATGTAAATTTATTCAT
CATTTTTCTCCACCTCACAGTAAAATCAGCAATACGGAACATGAAATGTAGTGATTATGT
ATTTAGAACTTGTATTTTGCATCCACACTTTATAAATCGGCATTTTTCACGTGATA

consensusID : consensus_8075#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1032
fasta sequence

                              [CCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCAGTTTTGTGTGCTCCAAAGCCAAGCGAAGTTATACCTCAATGACGCATACATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTGCAAGAAACAAAAATATGACGGCATATCTCTGTCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAAATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTT-CCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAATGATCCATGGAAACACCAATACGCAACAAATACTTGAGCGTGTCGTTTATATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGCTGGAGTTGGATTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAACGTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAGAAATCGAAGCCGTTTCACATGTAAATTTTTTCATCATTTTTCTCCACCTCACAGTAAAATCAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGCTATAGCAATAGAAACAACCTATTATAATCGAGTTTAAAATTCCAGACGCATTATATGATTAACGATTGATTCGACAGAGCTCGTAAAATCTTTGAATCTTGTAAATGTGTTGTGTTTTTTCGACTTCCTCTTATCAAAATTCTCTTATCAACATGTTATTCCCATGAACATTCCCTGTAATATGATCATTTTAACACCATATGCAGGCTCGG]

[-] EMBL BX619824             [CCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCAGTTTTGTGTGCTCCAAAGCCAAGCGAAGTTATACCTCAATGACGCATACATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTGCAAGAAACAAAAATATGACGGCATATCTCTGTCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAAATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BM601647             [                                                                                                                                                                                                                                                                                                                                              CCGTTAAGTCGAACACGTTCCTTAACCGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTT CCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAATGATCCATGGAAACACCAATACGCAACAAATACTTGAGCGTGTCGTTTATATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGCTGGAGTTGGATTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAACGTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAGAAATCGAAGCCGTTTCACATGTAAATTTTTTCATCATTTTTCTCCACCTCACAGTAAAATCAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGCTATAGCAATAGAAACAACCTATTATAATCGAGTTTAAAATTCCAGACGCATTATATGATTAACGATTGATTCGACAGAGCTCGTAAAATCTTTGAATCTTGTAAATGTGTTGTGTTTTTTCGACTTCCTCTTATCAAAATTCTCTTATCAACATGTTATTCCCATGAACATTCCCTGTAATATGATCATTTTAACACCATATGCAGGCTCGG]
[-] EMBL BM615441             [                                                                                                                                                                                                                                                                                                                                                                          AAACTAGATGCGGCGAACTAAAAATCCCGGTACGATAACCA TTGACCTCAAAATTGATTCTATCATAGCACAAGTAGATCCCTTTCCCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAATGATCCATGGAAACACCAATACGCAACAAATACTTGAGCGTGTCGTTTATATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGCTGGAGTTGGATTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAACGTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAGAAATCGAAGCCGTTTCACATGTAAATTTTTTCATCATTTTTCTCCACCTCACAGTAAAATCAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGCTATAGCAATAGAAACAACCTATTATAATCGAGTTTAAAATTCCAGACGCATTATATGATTAACGATTGATTCGACAGAGCTCGTAAAATCTTTGAATCTTGTAAATGTGTTGTGTTTTTTCGACTTCCTCTTATCAAAATTCTCTTATCAACATGTTATTCCCATGAACcgg                                        ]




>consensus_8075#1
CCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTG
AAAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATG
TATTGCCCAGCAGTTTTGTGTGCTCCAAAGCCAAGCGAAGTTATACCTCAATGACGCATA
CATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTGCAAGAAACAAAAATAT
GACGGCATATCTCTGTCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAA
ATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAAC
CGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGA
TTCTATCATAGCACAAGTAGATCCCTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAG
TTGGTTCAAATGATCCATGGAAACACCAATACGCAACAAATACTTGAGCGTGTCGTTTAT
ATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGCTGGAGTTGGA
TTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAAC
GTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAGA
AATCGAAGCCGTTTCACATGTAAATTTTTTCATCATTTTTCTCCACCTCACAGTAAAATC
AGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGCTATAGCAATAGAAACAACCT
ATTATAATCGAGTTTAAAATTCCAGACGCATTATATGATTAACGATTGATTCGACAGAGC
TCGTAAAATCTTTGAATCTTGTAAATGTGTTGTGTTTTTTCGACTTCCTCTTATCAAAAT
TCTCTTATCAACATGTTATTCCCATGAACATTCCCTGTAATATGATCATTTTAACACCAT
ATGCAGGCTCGG

consensusID : consensus_8075#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 683
fasta sequence

                              [GGGGTTTTTTCTTTTGACGCCCCCACGTGNGGGATATAGGGCTTTTGTGATGATTTTGGTGAGATNGGGGTTACCTCGTCCGGTCNCTCAGGATATGTTGGCCGCCTCTTTTANAGACCTGTACCGGAACCATTTTCTGTCCNCCGCTTTATTAGGTGTTTCCCAATAAACCACGCTCTCNAGGGAGGGGGGGTTTNGTATACCANCNTTGGGACCAACCAATCAGGGAGCNCAACCGGTTGNTTTTTAGTNGAATGACACAGGCTGTTGTGCGGNCNAAAGCACCAAANTTTTNCNTTTCGTAAATTGTTTATGTGGCCACAAGCAAGTTTTNGNTGTGCCTCCCAGAGACCCAAGGCGTANAGTTTTATACCTTCAATGACGGCAATCATCAAACACTTTCTCCGTAGAAACAACACNCCAGAGCCCAAATTGTCAAGAAACAAAATAGGGCCGGCATATCTCTGCTATGGNTCTCGNATAGCCAAGTATGTGGTTATATAAAATTTCCCAAAAATATACGCGAAATTTATCACCGTCTGATAGCAGCCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGGCGCGAACTAAAATCCGGTACAGATAACCATTGACCTCAAAGTGATCTANCTAATAGCACAAGTAGATCCCTGTGTTACCTCGGCGATCTG]

[-] EMBL AL931319             [GGGGTTTTTTCTTTTGACGCCCCCACGTGNGGGATATAGGGCTTTTGTGATGATTTTGGTGAGATNGGGGTTACCTCGTCCGGTCNCTCAGGATATGTTGGCCGCCTCTTTTANAGACCTGTACCGGAACCATTTTCTGTCCNCCGCTTTATTAGGTGTTTCCCAATAAACCACGCTCTCNAGGGAGGGGGGGTTTNGTATACCANCNTTGGGACCAACCAATCAGGGAGCNCAACCGGTTGNTTTTTAGTNGAATGACACAGGCTGTTGTGCGGNCNAAAGCACCAAANTTTTNCNTTTCGTAAATTGTTTATGTGGCCACAAGCAAGTTTTNGNTGTGCCTCCCAGAGACCCAAGGCGTANAGTTTTATACCTTCAATGACGGCAATCATCAAACACTTTCTCCGTAGAAACAACACNCCAGAGCCCAAATTGTCAAGAAACAAAATAGGGCCGGCATATCTCTGCTATGGNTCTCGNATAGCCAAGTATGTGGTTATATAAAATTTCCCAAAAATATACGCGAAATTTATCACCGTCTGATAGCAGCCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGGCGCGAACTAAAATCCGGTACAGATAACCATTGACCTCAAAGTGATCTANCTAATAGCACAAGTAGATCCCTGTGTTACCTCGGCGATCTG]




>consensus_8075#2
GGGGTTTTTTCTTTTGACGCCCCCACGTGNGGGATATAGGGCTTTTGTGATGATTTTGGT
GAGATNGGGGTTACCTCGTCCGGTCNCTCAGGATATGTTGGCCGCCTCTTTTANAGACCT
GTACCGGAACCATTTTCTGTCCNCCGCTTTATTAGGTGTTTCCCAATAAACCACGCTCTC
NAGGGAGGGGGGGTTTNGTATACCANCNTTGGGACCAACCAATCAGGGAGCNCAACCGGT
TGNTTTTTAGTNGAATGACACAGGCTGTTGTGCGGNCNAAAGCACCAAANTTTTNCNTTT
CGTAAATTGTTTATGTGGCCACAAGCAAGTTTTNGNTGTGCCTCCCAGAGACCCAAGGCG
TANAGTTTTATACCTTCAATGACGGCAATCATCAAACACTTTCTCCGTAGAAACAACACN
CCAGAGCCCAAATTGTCAAGAAACAAAATAGGGCCGGCATATCTCTGCTATGGNTCTCGN
ATAGCCAAGTATGTGGTTATATAAAATTTCCCAAAAATATACGCGAAATTTATCACCGTC
TGATAGCAGCCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTAGATGGCGCGAAC
TAAAATCCGGTACAGATAACCATTGACCTCAAAGTGATCTANCTAATAGCACAAGTAGAT
CCCTGTGTTACCTCGGCGATCTG

consensusID : consensus_8075#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence

                              [AATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTAGGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGAGTAGAAAGTAGCTTTGCTGAGTCTCTGTCTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTGTTGGCTATGGGATTTCATATTATACCATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAAAGTGTCTTTTTTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCAATGCCTTCCACTGTTTGTTTTGTAACAATTGATGTTATGTTTTCTTGTGATATTTCGGAAATATTCTTGTTCATCCAATTTGTAGCTATCTGAATAGCTAATGAGGTGTTCAATTCAAGAATATCAAGGATATCACACGATTCTTTAATCAATTCTGGTTTCTTAGCCCACTGGTATGCTTTTAATTCTGATGGTACGACGAACAGATTTGCCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAACGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM585241             [AATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTAGGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGAGTAGAAAGTAGCTTTGCTGAGTCTCTGTCTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTGTTGGCTATGGGATTTCATATTATACCATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAAAGTGTCTTTTTTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCAATGCCTTCCACTGTTTGTTTTGTAACAATTGATGTTATGTTTTCTTGTGATATTTCGGAAATATTCTTGTTCATCCAATTTGTAGCTATCTGAATAGCTAATGAGGTGTTCAATTCAAGAATATCAAGGATATCACACGATTCTTTAATCAATTCTGGTTTCTTAGCCCACTGGTATGCTTTTAATTCTGATGGTACGACGAACAGATTTGCCTTTAACTTACGACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTTCAAACGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_8075#3
AATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTAGGAGTAAAAA
ATGCAGCGTCGAATTTGATCATAGACGAAAGAGTAGAAAGTAGCTTTGCTGAGTCTCTGT
CTCCTGTGGTATTAAAAATCAGAAGTCGTTTGTGTTGGCTATGGGATTTCATATTATACC
ATCGGGCACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAGATAAAGTGTCTTTT
TTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAGCGGTCAATGCCTTCCA
CTGTTTGTTTTGTAACAATTGATGTTATGTTTTCTTGTGATATTTCGGAAATATTCTTGT
TCATCCAATTTGTAGCTATCTGAATAGCTAATGAGGTGTTCAATTCAAGAATATCAAGGA
TATCACACGATTCTTTAATCAATTCTGGTTTCTTAGCCCACTGGTATGCTTTTAATTCTG
ATGGTACGACGAACAGATTTGCCTTTAACTTACGACATTCTTCCCTTATAATTTCCATAC
ACTCAGAGGGTTGAACAACTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAGTTGGTT
CAAACGGACGCGTGGGCGGACGCGTGGGCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8075#0      CGGATGATTATTTCTTGCTTAATTTAGTATCTAACGATTGTTTGATTTCATTCGTTACAA 60
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      CAAGAGTTTCATTGCGTAGTAGATGTACACATAAATCTCTCTAAATTTAGAGCTACGAAT 120
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      GCGGCTCCTATCAAATGAATCGAACCAGTAATTAAAATATCGCAGGTTTCACCTTTAAAT 180
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      ACAAAGTCTTCATCGATTTGCTTGAAAACAGATTCAATTGATTCATGCGGGAAACCCTCT 240
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------CCTTTAACTTAC 12
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      TTATGTTGAATTGTCTGACTCCAATATTCATAATTTTGCCTGCACCGCTGTAATTGAAGC 300
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      GACATTCTTCCCTTATAATTTCCATACACTCAGAGGGTTGAACAACTGAAAACACATCAG 72
consensus_8075#2      --------------------------------------------GGGGTTTTTTCTTTTG 16
                                                                                  

consensus_8075#0      TCGAATGGAAAATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTA 360
consensus_8075#3      ----------AATTATGATTCATAGCATCTACGCACGTCACTGTATCGCGAGGAACACTA 50
consensus_8075#1      AGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTAATGTATTGCCCAGCA 132
consensus_8075#2      ACGCCCCCACGTGNGGGATATAGGGCTTTTGTGATGATTTTGGTGAGATNGGGGTTACCT 76
                                               *      *    *     *        *   *   

consensus_8075#0      GGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGA-GTAGAAAGTAGCTTTGC 419
consensus_8075#3      GGAGTAAAAAATGCAGCGTCGAATTTGATCATAGACGAAAGA-GTAGAAAGTAGCTTTGC 109
consensus_8075#1      GTTTTGTGTGCTCCAAAGCCAAGCGAAGTTATACCTCAATGACGCATACATCAACACTTT 192
consensus_8075#2      CGTCCGGTCNCT-CAGGATATGTTGGCCGCCTCTTTTANAGACCTGTACCGGAACCATTT 135
                                 * **                *     *  **     *    * *  *  

consensus_8075#0      TGAGTC-TCTGTCTCCTGTGGTATTAAAAATCAG-AAGTCGTTTGTGTTGGCTATGGGAT 477
consensus_8075#3      TGAGTC-TCTGTCTCCTGTGGTATTAAAAATCAG-AAGTCGTTTGTGTTGGCTATGGGAT 167
consensus_8075#1      CTCGTA-GA-AACACATCCAAGGCCAAAATTGTGCAAGAAACAAAAATATGACGGCATAT 250
consensus_8075#2      TCTGTCCNCCGCTTTATTAGGTGTTTCCCAATAA-ACCACGCTCTCNAGGGAGGGGGGGT 194
                         **           *                  *              *        *

consensus_8075#0      TTCATATTATACCATCGGG-CACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAG 536
consensus_8075#3      TTCATATTATACCATCGGG-CACATAAATGTATGCTTTCTAAGGTATGAGCTCCATCGAG 226
consensus_8075#1      CTCTGTCTATGCTCTCGA--TATGCAAGTAATTGTTTATAAATTTTCCAAAAATATAAAC 308
consensus_8075#2      TTNGTATACCANCNTTGGGACCAACCAATCAGGGAGCNCAACCGGTTGNTTTTTAGTNGA 254
                       *            * *         * *    *      *             *     

consensus_8075#0      ATAAAGTGTCTTTT--TTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAG 594
consensus_8075#3      ATAAAGTGTCTTTT--TTGTATCATACAGTATCCTCTGCAACCTTCCCGGCCAGAAACAG 284
consensus_8075#1      GAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAACCGAAACTA 368
consensus_8075#2      ATGACACAGGCTGT---TGTGCGGNCNA--AAGCACCAAANTTTTNCNTTTCGTAAATTG 309
                         *              *                *       **      *  ***   

consensus_8075#0      CGGTCAATGCCTTCCACTGTTTGTTTTG-TAACAATT-CGGACG-CTGTTTTCTTGTGAT 651
consensus_8075#3      CGGTCAATGCCTTCCACTGTTTGTTTTG-TAACAATT-GATGTT-ATGTTTTCTTGTGAT 341
consensus_8075#1      GATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTC-AAAATTGATTCTATC 427
consensus_8075#2      TTTATGTGGCCACAAGCAAGTTTTNGNTGTGCCTCCCAGAGACCCAAGGCGTANAGTTTT 369
                              *                    *  *                       *   

consensus_8075#0      ATTTCGGAAATATTCTTGTTCATCCAAT-TTGTAGCTATCTGAATAGCTAATGAGGTGTT 710
consensus_8075#3      ATTTCGGAAATATTCTTGTTCATCCAAT-TTGTAGCTATCTGAATAGCTAATGAGGTGTT 400
consensus_8075#1      ATAGCACAAGTAGATCCCTTTCCCTTTG-TTCCAGACACGTGTATCACAGGAAGTTGGTT 486
consensus_8075#2      ATACCTTCAATGACGGCAATCATCAAACACTTTCTCCGTAGAAACAACACNCCAGAGCCC 429
                      **  *   * *        *   *      *            *   *            

consensus_8075#0      CAATT--CAAGAATATCAAGGATATCA-CACGATTCGTTAACCAAT-TCTGGTTTCTTAG 766
consensus_8075#3      CAATT--CAAGAATATCAAGGATATCA-CACGATTCTTTAATCAAT-TCTGGTTTCTTAG 456
consensus_8075#1      CAAAT--GATCCATGGAAACACCAATA-CGCAACAAATACTTGAGCGTGTCGTTTATATG 543
consensus_8075#2      AAATTGTCAAGAAACAAAATAGGGCCGGCATATCTCTGCTATGGNTCTCGNATAGCCAAG 489
                       ** *   *   *    **         *                  *    *      *

consensus_8075#0      TTTTCTGGTATGCTTTTAATTCTGATGGTACGA----CGAACAGATTTGCCTTTAACTTA 822
consensus_8075#3      CCCACTGGTATGCTTTTAATTCTGATGGTACGA----CGAACAGATTTGCCTTTAACTTA 512
consensus_8075#1      CTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGCTGGAGTTGGATTG 603
consensus_8075#2      TATGTGGTTATATAAAATTTCCCAAAAATATAC------GCGAAATTTATCACCGTCTGA 543
                            *   *        *    *                 *    *         *  

consensus_8075#0      CGACATTCTTCCCTTATAATTTCCATACACTCAG---------AGGGTTGA-ACAACTGA 872
consensus_8075#3      CGACATTCTTCCCTTATAATTTCCATACACTCAG---------AGGGTTGA-ACAACTTT 562
consensus_8075#1      TAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAACGTT 663
consensus_8075#2      TAGCAGCCATTCCGT-TAAGTCGAACACGTTCTTTAACCGAAACTAGATGGCGCGAACTA 602
                               *       ** *   *  *                  *  *   * *    

consensus_8075#0      ----AAACACATCAGAGCCACGTTTTATTATACCAGCTTTCTGCCATGCAATTTCTTCTA 928
consensus_8075#3      ----CCCTTTGTTCCAGACACGT------GTATCA---------CAGGAAGTTGGTTCAA 603
consensus_8075#1      GGAACCTTTCATTGTTGACAATAGGTGCGATTTAAC------GCTAGAAACATGCAACAA 717
consensus_8075#2      ----AAATCCGGTACAGATAACCATTG--ACCTCAAAGT--GATCTANCTAATAGCACAA 654
                                      *  *              *                 *    * *

consensus_8075#0      ATGTAT--TGCCCAGCAGTTTTGTGTGCTCCAAACCAAGCGAAGTTATACCTACGGTACC 986
consensus_8075#3      ACGGAC--GCGTGGGCGGACGCGTGGGCGG------------------------------ 631
consensus_8075#1      AGAAATCGAAGCCGTTTCACATGTAAATTTTTTCATCATTTTTCTCCACCTCACAGTAAA 777
consensus_8075#2      GTAGATCCCTGTGTTACCTCG-GCGATCTG------------------------------ 683
                          *                 *                                     

consensus_8075#0      AGTTTTAGGTAAAACATTCGTACAGTCATATCTACCTCCGATGCCCACCTCAATGACGCA 1046
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ATCAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGCTATAGCAATAGAAACAA 837
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      TACATCAACACTTTCTCGTAGAAACACATCCAAGGCCAAAATTGTCAAGAAACAAAAATA 1106
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      CCTATTATAATCGAGTTTAAAATTCCAGACGCATTATATGATTAACGATTGATTCGACAG 897
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      TGACGGCATATCTCTGCTATGCTCTCGATATGCAAGTAATTGTTTATAAATTTTCCAAAA 1166
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      AGCTCGTAAAATCTTTGAATCTTGTAAATGTGTTGTGTTTTTTCGACTTCCTCTTATCAA 957
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      ATATAAACGAAATTTATCACTCGATAGAGGCATTCCGTTAAGTCGAACACGTTCTTTAAC 1226
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      AATTCTCTTATCAACATGTTATTCCCATGAACATTCCCTGTAATATGATCATTTTAACAC 1017
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      CGAAACTAGATGCGGCGAACTAAAAAATCCGGTACGATAACCATTTGACCTCAAAATTGA 1286
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      CATATGCAGGCTCGG--------------------------------------------- 1032
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      TTCTATCATAGCACAAGTAGATCCCTTTCCCTTTGTTCCAGACACGTGTATCACAGGAAG 1346
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      TTGGTTCAAATGATCCATGGAAAAATAAATACGCAACAAATACTTGAGCGTGTCGTTTAT 1406
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      ATGCTTATTGTCTTCACTATGTTTTCGAAGAATTGAATCTTGAAGAACGACTGGAGTTGG 1466
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      ATTGTAATGAGTTTAATGAAGAAATTGCATTCTCGTAGCTCTCGTCTAGAGTAGATGCAA 1526
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      CGTTGGAACCTTTCATTGTTGACAATAGGTGCGATTTAACGCTAGAAACATGCAACAAAG 1586
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      AAATCGAAGCCGTTTCACATGTAAATTTATTCATCATTTTTCTCCACCTCACAGTAAAAT 1646
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      CAGCAATACGGAACATGAAATGTAGTGATTATGTATTTAGAACTTGTATTTTGCATCCAC 1706
consensus_8075#3      ------------------------------------------------------------
consensus_8075#1      ------------------------------------------------------------
consensus_8075#2      ------------------------------------------------------------
                                                                                  

consensus_8075#0      ACTTTATAAATCGGCATTTTTCACGTGATA 1736
consensus_8075#3      ------------------------------
consensus_8075#1      ------------------------------
consensus_8075#2      ------------------------------