These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_809#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence [GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCATACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGGTAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAAGGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGATGGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCGGCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG] [+] EMBL AGA281196 [GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCATACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGGTAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAAGGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGATGGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCGGCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG] consensusID : consensus_809#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence [CCGAGGNTNATGGCGACGTGTGTGCGGCTCGATGGCGCTGATGGATGCGGGCGTCCGGTACAGGAAGCGGCGCCGGTGTAGCGATCGGGTTGATAAAACAAAGTACGAAAAAACCAACGGACACAAAAACAACCCCTGGCAGGGGAAACTAACTGCATACCCTGGAACCCCGGGAAATCTGGCTCGGCATCGAGGACTACATGGGCGATATGTGACATNAAGGTGGCGGGTACAAGGCGCGGCATGTACGGCGATACAGGCGGATATAAGGTGCCTGGCATACCGCTGAA] [+] EMBL AL932567 [CCGAGGNTNATGGCGACGTGTGTGCGGCTCGATGGCGCTGATGGATGCGGGCGTCCGGTACAGGAAGCGGCGCCGGTGTAGCGATCGGGTTGATAAAACAAAGTACGAAAAAACCAACGGACACAAAAACAACCCCTGGCAGGGGAAACTAACTGCATACCCTGGAACCCCGGGAAATCTGGCTCGGCATCGAGGACTACATGGGCGATATGTGACATNAAGGTGGCGGGTACAAGGCGCGGCATGTACGGCGATACAGGCGGATATAAGGTGCCTGGCATACCGCTGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_809#0 GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCAT 60 consensus_809#1 --------------------CCGAGGNTNATG--GCGACGTGTGTGCGGCTCGATGGCG- 37 *** * * *** *** * * * ** consensus_809#0 ACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGG 120 consensus_809#1 -CTGATGGATGCG---GGCGTCCGGTACAGGA--AGCGGCGCCGGTGTAGCGAT--CGGG 89 **** *** * *** ** * ** * *** * * * * **** consensus_809#0 TAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAA 180 consensus_809#1 TTGATAAAACAAAGT-ACGAAAAAACCAACGGACACAAAAACA--------ACCCCTGGC 140 * ** * * *** * ** **** * *** *** *** consensus_809#0 GGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGAT 240 consensus_809#1 AGGGGAAACTAA----CTGCATA---CCCTGGAACCCCGGGAAATCTGGCTCGGCATCGA 193 * ** * * ***** * * ***** * ** * **** * * consensus_809#0 GGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCG 300 consensus_809#1 GGACTACATGGGCGATATGTGAC--ATNAAGGTGGCGGGTACAAGGCGCGGCATGTACGG 251 **** * * * ** * ** * * * * * * *** ** * * * * consensus_809#0 -GCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG 348 consensus_809#1 CGATACAGGCGGATATAAGGTGCCTGGC-ATACCGCTGAA--------- 290 * * * ** * * *** * ** *** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||